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| author | Ludovic Courtès <ludovic.courtes@inria.fr> | 2018-03-12 16:06:17 +0100 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2018-03-12 16:09:24 +0100 |
| commit | c0edb5b5430a5278a3ebc9aeea9d3c8ae9a2e1f1 (patch) | |
| tree | d0a1cf843a6c95dca337e02e07a246c9db5b3df1 | |
| parent | 93f3b7762ea872e0e72d62aa14b417d324fdeed8 (diff) | |
| download | guix-c0edb5b5430a5278a3ebc9aeea9d3c8ae9a2e1f1.tar guix-c0edb5b5430a5278a3ebc9aeea9d3c8ae9a2e1f1.tar.gz | |
gnu: arpack-ng: Update to 3.5.0; use 3.3.0 for julia.
Partly fixes <https://bugs.gnu.org/30282>.
* gnu/packages/maths.scm (arpack-ng): Update to 3.5.0.
[native-inputs]: New field.
(arpack-ng-3.3.0): New variable.
* gnu/packages/julia.scm (julia)[inputs]: Use ARPACK-NG-3.3.0.
| -rw-r--r-- | gnu/packages/julia.scm | 7 | ||||
| -rw-r--r-- | gnu/packages/maths.scm | 35 |
2 files changed, 35 insertions, 7 deletions
diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm index 41bbc66dd2..7a44abdec2 100644 --- a/gnu/packages/julia.scm +++ b/gnu/packages/julia.scm @@ -315,7 +315,12 @@ "USE_SYSTEM_OPENSPECFUN=1"))) (inputs `(("llvm" ,llvm) - ("arpack-ng" ,arpack-ng) + + ;; The bundled version is 3.3.0 so stick to that version. With other + ;; versions, we get test failures in 'linalg/arnoldi' as described in + ;; <https://bugs.gnu.org/30282>. + ("arpack-ng" ,arpack-ng-3.3.0) + ("coreutils" ,coreutils) ;for bindings to "mkdir" and the like ("lapack" ,lapack) ("openblas" ,openblas) ;Julia does not build with Atlas diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index cf3d8ae836..f9e5d2c3a2 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -12,7 +12,7 @@ ;;; Copyright © 2015 Fabian Harfert <fhmgufs@web.de> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 Kei Kebreau <kkebreau@posteo.net> -;;; Copyright © 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Leo Famulari <leo@famulari.name> ;;; Copyright © 2016, 2017 Thomas Danckaert <post@thomasdanckaert.be> ;;; Copyright © 2017 Paul Garlick <pgarlick@tourbillion-technology.com> @@ -418,18 +418,26 @@ computing convex hulls.") (define-public arpack-ng (package (name "arpack-ng") - (version "3.2.0") + (version "3.5.0") + (home-page "https://github.com/opencollab/arpack-ng") (source (origin (method url-fetch) - (uri (string-append "https://github.com/opencollab/arpack-ng/archive/" - version ".tar.gz")) + (uri (string-append home-page "/archive/" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1fwch6vipms1ispzg2djvbzv5wag36f1dmmr3xs3mbp6imfyhvff")))) + "0f8jx3fifmj9qdp289zr7r651y1q48k1jya859rqxq62mvis7xsh")))) (build-system gnu-build-system) - (home-page "https://github.com/opencollab/arpack-ng") + (arguments + '(#:phases (modify-phases %standard-phases + (add-after 'unpack 'autoreconf + (lambda _ + (invoke "autoreconf" "-vfi")))))) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool))) (inputs `(("lapack" ,lapack) ("fortran" ,gfortran))) @@ -440,6 +448,21 @@ large scale eigenvalue problems.") (license (license:non-copyleft "file://COPYING" "See COPYING in the distribution.")))) +(define-public arpack-ng-3.3.0 + (package + (inherit arpack-ng) + (version "3.3.0") + (name (package-name arpack-ng)) + (home-page (package-home-page arpack-ng)) + (source + (origin + (method url-fetch) + (uri (string-append home-page "/archive/" version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1cz53wqzcf6czmcpfb3vb61xi0rn5bwhinczl65hpmbrglg82ndd")))))) + (define-public arpack-ng-openmpi (package (inherit arpack-ng) (name "arpack-ng-openmpi") |