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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2022-06-22 15:45:33 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-11-24 15:02:10 +0100 |
| commit | 01124e5a109bcae5ad59670eb855d479251acb9a (patch) | |
| tree | 2ef66e563fa13628ca3531e5fef13557a922cc9e | |
| parent | c2cba91ac9b8f8d4ff860f9993280c35acc6cff7 (diff) | |
| download | guix-01124e5a109bcae5ad59670eb855d479251acb9a.tar guix-01124e5a109bcae5ad59670eb855d479251acb9a.tar.gz | |
gnu: Add r-asafe.
* gnu/packages/bioconductor.scm (r-asafe): New variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 12a28dd6a6..9c876704a0 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2497,6 +2497,29 @@ at @dfn{EBI} (European Bioinformatics Institute) and build Bioconductor data structures: @code{ExpressionSet}, @code{AffyBatch}, @code{NChannelSet}.") (license license:artistic2.0))) +(define-public r-asafe + (package + (name "r-asafe") + (version "1.22.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "ASAFE" version)) + (sha256 + (base32 + "1l9iqw2imr6w2gwqrmg05jp6lj2xc7hbyhd144d4q8vw8z7ga4ns")))) + (properties `((upstream-name . "ASAFE"))) + (build-system r-build-system) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/ASAFE") + (synopsis "Ancestry Specific Allele Frequency Estimation") + (description + "The @code{ASAFE} package contains a collection of functions that can be +used to carry out an @dfn{EM} (Expectation–maximization) algorithm to estimate +ancestry-specific allele frequencies for a bi-allelic genetic marker, e.g. an +@dfn{SNP} (single nucleotide polymorphism) from genotypes and ancestry +pairs.") + (license license:artistic2.0))) + (define-public r-aseb (package (name "r-aseb") |