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authorRicardo Wurmus <rekado@elephly.net>2019-03-25 09:38:40 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-25 10:02:02 +0100
commit5ef7d057ed4791686ebc2c2649069cc54ca026c5 (patch)
treea0a1bab12a3f4943b06c1af6b287718ea3fa9083
parent601ddf02cc8ceb59c220b01bc7b1894de261f2e9 (diff)
downloadguix-5ef7d057ed4791686ebc2c2649069cc54ca026c5.tar
guix-5ef7d057ed4791686ebc2c2649069cc54ca026c5.tar.gz
gnu: Add r-snp-plotter.
* gnu/packages/cran.scm (r-snp-plotter): New variable.
-rw-r--r--gnu/packages/cran.scm25
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index d6a42ceea2..fca123f5b4 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -12388,3 +12388,28 @@ alleles, estimating and testing for Hardy-Weinberg disequilibrium, estimating
and testing for linkage disequilibrium, ...")
;; Any GPL version.
(license license:gpl2+)))
+
+(define-public r-snp-plotter
+ (package
+ (name "r-snp-plotter")
+ (version "0.5.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "snp.plotter" version))
+ (sha256
+ (base32
+ "16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"))))
+ (properties `((upstream-name . "snp.plotter")))
+ (build-system r-build-system)
+ (propagated-inputs `(("r-genetics" ,r-genetics)))
+ (home-page "https://cran.r-project.org/web/packages/snp.plotter/")
+ (synopsis "Plot p-values using single SNP and/or haplotype data")
+ (description
+ "This package helps you create plots of p-values using single SNP and/or
+haplotype data. Main features of the package include options to display a
+@dfn{linkage disequilibrium} (LD) plot and the ability to plot multiple
+datasets simultaneously. Plots can be created using global and/or individual
+haplotype p-values along with single SNP p-values. Images are created as
+either PDF/EPS files.")
+ (license license:gpl2+)))