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authorHartmut Goebel <h.goebel@crazy-compilers.com>2016-10-23 21:20:46 +0200
committerHartmut Goebel <h.goebel@crazy-compilers.com>2016-11-15 22:32:01 +0100
commitde5bc89093895744e9d0cdcf26c9b3bc971a8f0e (patch)
tree6b6607899e9375c47702c7575225b5e56b8ce79f
parent54c85e12fda033ef01bb2c649b540d9694a368f3 (diff)
downloadguix-de5bc89093895744e9d0cdcf26c9b3bc971a8f0e.tar
guix-de5bc89093895744e9d0cdcf26c9b3bc971a8f0e.tar.gz
gnu: python2-pbcore: Fix inputs:
* gnu/packages/bioinformatics.scm (python2-pbcore) [inputs] change to [propagated-inputs]. [native-inputs]: Remove python-docutils, which comes with sphinx. [former propagated-inputs]: move all (which is only pyxb) to [inputs].
-rw-r--r--gnu/packages/bioinformatics.scm10
1 files changed, 4 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0d5d8ff32a..f9929dfa4f 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3476,17 +3476,15 @@ interrupted by stop codons. OrfM finds and prints these ORFs.")
"1kjmv891d6qbpp4shhhvkl02ff4q5xlpnls2513sm2cjcrs52f1i"))))
(build-system python-build-system)
(arguments `(#:python ,python-2)) ; pbcore requires Python 2.7
- (inputs
+ (propagated-inputs
`(("python-cython" ,python2-cython)
("python-numpy" ,python2-numpy)
("python-pysam" ,python2-pysam)
("python-h5py" ,python2-h5py)))
(native-inputs
- `(("python-docutils" ,python2-docutils)
- ("python-nose" ,python2-nose)
- ("python-sphinx" ,python2-sphinx)))
- (propagated-inputs
- `(("python-pyxb" ,python2-pyxb)))
+ `(("python-nose" ,python2-nose)
+ ("python-sphinx" ,python2-sphinx)
+ ("python-pyxb" ,python2-pyxb)))
(home-page "http://pacificbiosciences.github.io/pbcore/")
(synopsis "Library for reading and writing PacBio data files")
(description