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| author | Eric Bavier <bavier@member.fsf.org> | 2019-09-27 22:19:39 -0500 |
|---|---|---|
| committer | Eric Bavier <bavier@member.fsf.org> | 2019-09-27 22:23:44 -0500 |
| commit | ba567cae9725f8adf717106f5b54baeb6efd89e4 (patch) | |
| tree | 1454925fb036ee9c37bab1cdd9df0fdb718882ad | |
| parent | 3e27f472dbe0037a8cdfa3423c1806be66a79e43 (diff) | |
| download | guix-ba567cae9725f8adf717106f5b54baeb6efd89e4.tar guix-ba567cae9725f8adf717106f5b54baeb6efd89e4.tar.gz | |
gnu: dealii: Update to 9.1.1.
* gnu/packages/maths.scm (dealii): Update to 9.1.1.
[source]: Remove patch no longer needed.
* gnu/local.mk (dist_patch_DATA): ditto.
* gnu/packages/patches/dealii-mpi-deprecations.patch: Delete it.
| -rw-r--r-- | gnu/local.mk | 1 | ||||
| -rw-r--r-- | gnu/packages/maths.scm | 5 | ||||
| -rw-r--r-- | gnu/packages/patches/dealii-mpi-deprecations.patch | 28 |
3 files changed, 2 insertions, 32 deletions
diff --git a/gnu/local.mk b/gnu/local.mk index a6fe439904..b04a5d796e 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -764,7 +764,6 @@ dist_patch_DATA = \ %D%/packages/patches/darkice-workaround-fpermissive-error.patch \ %D%/packages/patches/dbus-helper-search-path.patch \ %D%/packages/patches/dbus-CVE-2019-12749.patch \ - %D%/packages/patches/dealii-mpi-deprecations.patch \ %D%/packages/patches/debops-constants-for-external-program-names.patch \ %D%/packages/patches/debops-debops-defaults-fall-back-to-less.patch \ %D%/packages/patches/deja-dup-use-ref-keyword-for-iter.patch \ diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 2e0883a724..291a367a2f 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -3636,7 +3636,7 @@ revised simplex and the branch-and-bound methods.") (define-public dealii (package (name "dealii") - (version "9.0.1") + (version "9.1.1") (source (origin (method url-fetch) @@ -3644,8 +3644,7 @@ revised simplex and the branch-and-bound methods.") "download/v" version "/dealii-" version ".tar.gz")) (sha256 (base32 - "0r7f8rhl3xr94imd372plizdcbqk0a70w73lwc3vw912dxk0sbyz")) - (patches (search-patches "dealii-mpi-deprecations.patch")) + "0xhjv0gzswpjbc43xbrpwfc5848g508l01855nszx3g5gwzlhnzw")) (modules '((guix build utils))) (snippet ;; Remove bundled sources: UMFPACK, TBB, muParser, and boost diff --git a/gnu/packages/patches/dealii-mpi-deprecations.patch b/gnu/packages/patches/dealii-mpi-deprecations.patch deleted file mode 100644 index 816d54140a..0000000000 --- a/gnu/packages/patches/dealii-mpi-deprecations.patch +++ /dev/null @@ -1,28 +0,0 @@ -From 40538ad31a71495649d174b0f7be5f7135d0a905 Mon Sep 17 00:00:00 2001 -From: David Wells <drwells@email.unc.edu> -Date: Sat, 2 Feb 2019 10:00:38 -0500 -Subject: [PATCH] Avoid calling a deprecated MPI function. - -This was deprecated a long time ago (1996) and is not present in the -latest version of openMPI (4.0): see - -https://www.open-mpi.org/faq/?category=mpi-removed - -Credit goes to Pratik Nayak for finding this issue. ---- - source/base/mpi.cc | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/source/base/mpi.cc b/source/base/mpi.cc -index bd1f7f9846a..b8cd45e7c26 100644 ---- a/source/base/mpi.cc -+++ b/source/base/mpi.cc -@@ -448,7 +448,7 @@ namespace Utilities - MPI_Aint displacements[] = {0, offsetof(MinMaxAvg, min_index)}; - MPI_Datatype types[] = {MPI_DOUBLE, MPI_INT}; - -- ierr = MPI_Type_struct(2, lengths, displacements, types, &type); -+ ierr = MPI_Type_create_struct(2, lengths, displacements, types, &type); - AssertThrowMPI(ierr); - - ierr = MPI_Type_commit(&type); |