From f4eac09653ddebbe57e16824da42aad04af35632 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 13 Mar 2019 13:16:22 +0100 Subject: gnu: Add r-siggenes. * gnu/packages/bioconductor.scm (r-siggenes): New variable. --- gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) (limited to 'gnu/packages') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index c188dacfbd..b29ae9d607 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2175,3 +2175,28 @@ the bridge between GEO and BioConductor.") "This package provides tools for parsing Illumina's microarray output files, including IDAT.") (license license:gpl2))) + +(define-public r-siggenes + (package + (name "r-siggenes") + (version "1.56.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "siggenes" version)) + (sha256 + (base32 + "0cjlb5r04x15xkhk00i3wvpx21kj0k29pn0mj3whwqk31zznnk1b")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-multtest" ,r-multtest))) + (home-page "https://bioconductor.org/packages/siggenes/") + (synopsis + "Multiple testing using SAM and Efron's empirical Bayes approaches") + (description + "This package provides tools for the identification of differentially +expressed genes and estimation of the @dfn{False Discovery Rate} (FDR) using +both the Significance Analysis of Microarrays (SAM) and the @dfn{Empirical +Bayes Analyses of Microarrays} (EBAM).") + (license license:lgpl2.0+))) -- cgit v1.2.3