From b50c966087b908e046da06e330c01e6d7a1ae9ca Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 3 Apr 2019 17:41:54 +0200 Subject: gnu: Add r-arrmdata. * gnu/packages/bioconductor.scm (r-arrmdata): New variable. --- gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d033258d17..b949b894c5 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -778,6 +778,30 @@ datasets which are derived from the Allen Brain Atlas: All datasets are restricted to protein coding genes.") (license license:gpl2+))) +(define-public r-arrmdata + (package + (name "r-arrmdata") + (version "1.18.0") + (source (origin + (method url-fetch) + ;; We cannot use bioconductor-uri here because this tarball is + ;; located under "data/experiment/" instead of "bioc/". + (uri (string-append "https://www.bioconductor.org/packages/" + "release/data/experiment/src/contrib/" + "ARRmData_" version ".tar.gz")) + (sha256 + (base32 + "0r1y3zn7ly4k3ngx55vfavn9s6aidbddlv2fbmj7hj3hvpslmyly")))) + (properties + `((upstream-name . "ARRmData"))) + (build-system r-build-system) + (home-page "https://www.bioconductor.org/packages/ARRmData/") + (synopsis "Example dataset for normalization of Illumina 450k methylation data") + (description + "This package provides raw beta values from 36 samples across 3 groups +from Illumina 450k methylation arrays.") + (license license:artistic2.0))) + (define-public r-hsmmsinglecell (package (name "r-hsmmsinglecell") -- cgit v1.2.3