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* tests: Test installation with a RAID root partition.Ludovic Courtès2016-10-27
| | | | | * gnu/tests/install.scm (%raid-root-os, %raid-root-os-source) (%raid-root-installation-script, %test-raid-root-os): New variables.
* file-systems: 'disk-partitions' detected partitions from mapped devices.Ludovic Courtès2016-10-27
| | | | | | | | | | Previously, partitions of mdadm- or cryptsetup-produced block devices would not be returned by 'disk-partitions'. * gnu/build/file-systems.scm (disk-partitions)[last-character]: New procedure. [partition?]: Add 'name' parameter and rewrite. Adjust caller. * gnu/build/file-systems.scm (ENOENT-safe): Silently ignore ENOMEDIUM.
* tests: Add #:memory-size parameter for the command to run the installed OS.Ludovic Courtès2016-10-27
| | | | | * gnu/tests/install.scm (qemu-command/writable-image): Add #:memory-size parameter and honor it.
* mapped-devices: Use 'mdadm-static' in 'raid-device-mapping'.Ludovic Courtès2016-10-27
| | | | | * gnu/system/mapped-devices.scm (open-raid-device, close-raid-device): Use MDADM-STATIC instead of MDADM. Use 'file-append'.
* gnu: Add mdadm-static.Ludovic Courtès2016-10-27
| | | | * gnu/packages/linux.scm (mdadm-static): New variable.
* gnu: libmikmod: Update to 3.3.10.Efraim Flashner2016-10-27
| | | | * gnu/packages/sdl.scm (libmikmod): Update to 3.3.10.
* gnu: sdl2: Update to 2.0.5.Efraim Flashner2016-10-27
| | | | * gnu/packages/sdl.scm (sdl2): Update to 2.0.5.
* gnu: Use 'https' for libsdl urls.Efraim Flashner2016-10-27
| | | | | | * gnu/packages/sdl.scm (sdl, sdl2, sdl-image, sdl-mixer, sdl-net) (sdl-ttf, sdl2-image, sdl2-ttf)[source]: Use https. [home-page]: Use https.
* gnu: mcelog: Update to 144.Tobias Geerinckx-Rice2016-10-27
| | | | * gnu/packages/linux.scm (mcelog): Update to 144.
* gnu: btrfs-progs: Update to 4.8.2.Tobias Geerinckx-Rice2016-10-27
| | | | * gnu/packages/linux.scm (btrfs-progs): Update to 4.8.2.
* gnu: gnupg: Add support for pcsc-lite.Mike Gerwitz2016-10-27
| | | | | | | | * gnu/packages/gnupg.scm (gnupg)[inputs]: Add pcsc-lite. [arguments]: Rename phase 'patch-config-files' to 'patch-paths'. Patch `scd/scdaemon.c' with absolute path of libpcsclite.so. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add pcsc-lite.Mike Gerwitz2016-10-27
| | | | | | * gnu/packages/security-token.scm (pcsc-lite): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add dbacl.ng02016-10-27
| | | | | | * gnu/packages/textutils.scm (dbacl): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: valgrind: Use 'modify-phases' syntax.Efraim Flashner2016-10-27
| | | | | * gnu/packages/valgrind.scm (valgrind)[arguments]: Use 'modify-phases' syntax.
* gnu: valgrind: Update to 3.12.0.Efraim Flashner2016-10-27
| | | | * gnu/packages/valgrind.scm (valgrind): Update to 3.12.0.
* gnu: python-pathlib2: Add comment.Hartmut Goebel2016-10-27
| | | | | | As suggested by Efraim Flashner. * gnu/packages/python.scm (python-pathlib2): Add comment.
* gnu: shotwell: Update to 0.25.0.Leo Famulari2016-10-26
| | | | | * gnu/packages/gnome.scm (shotwell): Update to 0.25.0. [inputs]: Add gcr.
* gnu: vdirsyncer: Update to 0.14.0.Leo Famulari2016-10-26
| | | | * gnu/packages/dav.scm (vdirsyncer): Update to 0.14.0.
* tests: Test installation with store on a separate partition.Ludovic Courtès2016-10-27
| | | | | | | | This is a followup to 0f65f54ebd76324653fd5506a7dab42ee44d9255. * gnu/tests/install.scm (%separate-store-os, %separate-store-os-source) (%separate-store-installation-script, %test-separate-store-os): New variables.
* gnu: Add lci.ng02016-10-26
| | | | | | | * gnu/packages/lolcode.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add autossh.Christopher Allan Webber2016-10-26
| | | | * gnu/packages/ssh.scm (autossh): New variable.
* gnu: r: Update to 3.3.1.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r): Update to 3.3.1.
* gnu: r-matrixstats: Update to 0.51.0.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-matrixstats): Update to 0.51.0.
* gnu: r-r-utils: Update to 2.4.0.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-r-utils): Update to 2.4.0.
* gnu: r-irlba: Update to 2.1.2.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-irlba): Update to 2.1.2.
* gnu: r-codetools: Update to 0.2-15.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-codetools): Update to 0.2-15.
* gnu: r-snow: Update to 0.4-2.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-snow): Update to 0.4-2.
* gnu: r-backports: Update to 1.0.4.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-backports): Update to 1.0.4.
* gnu: r-foreign: Update to 0.8-67.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-foreign): Update to 0.8-67.
* gnu: r-cluster: Update to 2.0.5.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-cluster): Update to 2.0.5.
* gnu: r-acepack: Update to 1.4.0.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-acepack): Update to 1.4.0.
* gnu: r-r6: Update to 2.2.0.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-r6): Update to 2.2.0.
* gnu: r-evaluate: Update to 0.10.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-evaluate): Update to 0.10.
* gnu: r-reshape2: Update to 1.4.2.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-reshape2): Update to 1.4.2.
* gnu: r-stringi: Update to 1.1.2.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-stringi): Update to 1.1.2.
* gnu: r-matrix: Update to 1.2-7.1.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-matrix): Update to 1.2-7.1.
* gnu: r-colorspace: Update to 1.2-7.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/statistics.scm (r-colorspace): Update to 1.2-7.
* gnu: r-jsonlite: Update to 1.1.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/web.scm (r-jsonlite): Update to 1.1.
* gnu: r-curl: Update to 2.2.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/web.scm (r-curl): Update to 2.2.
* gnu: r-seqinr: Update to 3.3-3.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-3.
* gnu: r-rcpparmadillo: Update to 0.7.500.0.0.Ricardo Wurmus2016-10-26
| | | | | | * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.500.0. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0.
* gnu: armadillo: Update to 7.500.0.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/maths.scm (armadillo): Update to 7.500.0.
* gnu: r-rmarkdown: Update to 1.1.Ricardo Wurmus2016-10-26
| | | | | * gnu/packages/statistics.scm (r-rmarkdown): Update to 1.1. [propagated-inputs]: Add r-evaluate, r-tibble.
* gnu: bioperl-minimal: Update to 1.7.0.Ricardo Wurmus2016-10-26
| | | | * gnu/packages/bioinformatics.scm (bioperl-minimal): Update to 1.7.0.
* gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a.Marius Bakke2016-10-26
| | | | | | | | | | The fix from upstream did not apply cleanly due to many context changes. This was adapted by cloning mupdf 1.9a from git and fixing conflicts after applying our patches and cherry-picking upstream commit 1e03c06. This is a follow-up to 47a04fca999b91309d196afc9ebf4d8ac6f2083f. * gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a.
* gnu: python-certifi: Update to 2016.8.31.ng02016-10-26
| | | | | | * gnu/packages/python.scm (python-certifi): Update to 2016.8.31. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: security-token: Use 'license:' prefix.Marius Bakke2016-10-26
| | | | | * gnu/packages/security-token.scm (libyubikey)[license]: Add prefix. (ykclient)[license]: Add prefix.
* gnu: yubico.scm: Rename to security-token.scm.Marius Bakke2016-10-26
| | | | | | * gnu/packages/yubico.scm: Delete file. * gnu/packages/security-token.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu: offlineimap: Install documentation.Marius Bakke2016-10-26
| | | | | | | | * gnu/packages/mail.scm (offlineimap)[native-inputs]: Add asciidoc and libxslt. [arguments]: Add phases 'build-documentation' and 'install-documentation' to build and install manpages. Also remove unneeded key 'inputs' from 'wrap-binary' phase.
* gnu: notmuch: Update to 0.23.1.Marius Bakke2016-10-26
| | | | | | | * gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/mail.scm (notmuch): Update to 0.23.1. Remove patch.
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