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* gnu: eigen: Update to 3.3.4.•••* gnu/packages/patches/eigen-arm-neon-fixes.patch: New patch. * gnu/packages/algebra.scm (eigen): Update to 3.3.4. [source]: Use patch. Disable svd-preallocation test for BDCSVD. [arguments]: Set "EIGEN_SEED" environment variable in check phase. * gnu/local.mk (dist_patch_DATA): Add patch. Eric Bavier2017-12-15
* gnu: python-pyicu: Set python2-variant.•••This follows up on commit d65854bdda4ad5464fcd8fe6289eedc13ea82ba1, which did not fix test failures for dependents using package-with-python2. * gnu/packages/python.scm (python-pyicu)[properties]: Set python2-variant. Tobias Geerinckx-Rice2017-12-15
* gnu: r-foreach: Update to 1.4.4.•••* gnu/packages/statistics.scm (r-foreach): Update to 1.4.4 Tobias Geerinckx-Rice2017-12-15
* gnu: text-editors: Fix nckx's copyright statement.•••* gnu/packages/text-editors.scm: Fix Tobias Geerinckx-Rice's copyright statement. Tobias Geerinckx-Rice2017-12-15
* gnu: ghc-reflection: Update to 2.1.2.•••* gnu/packages/haskell.scm (ghc-reflection): Update to 2.1.2. Tobias Geerinckx-Rice2017-12-15
* gnu: Add lookingglass.•••* gnu/packages/virtualization.scm (lookingglass): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Rutger Helling2017-12-15
* system: Add BeagleBone Black installer.•••* gnu/bootloader/u-boot.scm (u-boot-beaglebone-black-bootloader): New exported bootloader. * gnu/system/install.scm (beaglebone-black-installation-os): New exported variable. Mathieu Othacehe2017-12-15
* gnu: python2-pyicu: Disable failing test.•••* gnu/packages/python.scm (python2-pyicu)[arguments]: Add ‘delete-failing-test’ phase. Tobias Geerinckx-Rice2017-12-15
* gnu: vis: Update to 0.4.•••* gnu/packages/text-editors.scm (vis): Update to 0.4. [arguments]: Document the #:tests situation and the (broken) #:test-target. [inputs]: Add tre. Tobias Geerinckx-Rice2017-12-15
* gnu: Add Easytag.•••* gnu/packages/music.scm (easytag): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois2017-12-15
* bootloader: Factorize write-file-on-device.•••* gnu/bootloader/extlinux.scm (install-extlinux): Factorize bootloader writing in a new procedure write-file-on-device defined in (gnu build bootloader). * gnu/build/bootloader.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add new file. * gnu/system/vm.scm (qemu-img): Adapt to import and use (gnu build bootloader) module during derivation building. * gnu/scripts/system.scm (bootloader-installer-derivation): Ditto. Mathieu Othacehe2017-12-15
* vm: Adapt qemu command to ARM.•••* gnu/build/vm.scm (load-in-linux-vm): New argument #:target-arm32. Use it to adapt command for qemu-system-arm. This implies to choose a machine ("virt"), use the correct console port "ttyAMA0", disable KVM use that is buggy on some ARM boards (Odroid XU4 for example) and use user mode network stack instead of NIC. Gather all those options in a new variable "arch-specific-flags". * gnu/system/vm.scm (expression->derivation-in-linux-vm): Pass to load-in-linux-vm "#:target-arm32?" argument. Mathieu Othacehe2017-12-15
* gnu: ruby: Replace with ruby-2.4.3 [fixes CVE-2017-17405].•••* gnu/packages/ruby.scm (ruby-2.4.3): New variable. (ruby)[replacement]: New field. Ben Woodcroft2017-12-15
* gnu: bedtools: Update to 2.27.1.•••* gnu/packages/ruby.scm (bedtools): Update to 2.27.1. Ben Woodcroft2017-12-15
* gnu: ruby-2.2: Update to 2.2.9 [fixes CVE-2017-17405].•••* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.9. Ben Woodcroft2017-12-15
* gnu: ruby-2.3: Update to 2.3.6 [fixes CVE-2017-17405].•••* gnu/packages/ruby.scm (ruby-2.3): Update to 2.3.6. Ben Woodcroft2017-12-15
* gnu: yoshimi: Update to 1.5.5.•••* gnu/packages/music.scm (yoshimi): Update to 1.5.5. Ricardo Wurmus2017-12-15
* gnu: s-shell: Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659.•••* gnu/packages/shells.scm (s-shell): Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659. [version]: Use 'git-version'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-12-14
* gnu: xpra: Update to 2.2.•••* gnu/packages/xorg.scm (xpra): Update to 2.2. [inputs]: Add python2-netifaces and python2-pyopengl-accelerate. Fix position of commas. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Rutger Helling2017-12-14
* gnu: Add python2-pyopengl-accelerate.•••* gnu/packages/python.scm (python2-pyopengl-accelerate): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Rutger Helling2017-12-14
* gnu: python-scikit-learn: Patch test non-determinism.•••* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch: New file. * gnu/packages/machine-learning.scm (python-scikit-learn)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2017-12-14
* gnu: diamond: Update to 0.9.14.•••* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.14. Ben Woodcroft2017-12-14
* gnu: gucharmap: Use glib-or-gtk-build-system.•••* gnu/packages/gnome.scm (gucharmap): Use glib-or-gtk-build-system. Andy Wingo2017-12-14
* gnu: Erlang: Update to 20.1.7 [fixes CVE-2017-1000385].•••* gnu/packages/erlang.scm (erlang): Update to 20.1.7 (native-inputs): Use version-major+minor in the URI of erlang-manpages. Leo Famulari2017-12-13
* gnu: youtube-dl: Update to 2017.12.14.•••* gnu/packages/video.scm (youtube-dl): Update to 2017.12.14. Tobias Geerinckx-Rice2017-12-14
* gnu: r-caret: Update to 6.0-78.•••* gnu/packages/statistics.scm (r-caret): Update to 6.0-78 Tobias Geerinckx-Rice2017-12-14
* gnu: r-domc: Update to 1.3.5.•••* gnu/packages/statistics.scm (r-domc): Update to 1.3.5 Tobias Geerinckx-Rice2017-12-14
* gnu: perl-text-bibtex: Update to 0.85.•••* gnu/packages/tex.scm (perl-text-bibtex): Update to 0.85 Tobias Geerinckx-Rice2017-12-14
* gnu: perl-test-requires: Update to 0.10.•••* gnu/packages/perl-check.scm (perl-test-requires): Update to 0.10 Tobias Geerinckx-Rice2017-12-14
* gnu: perl-test-pod: Update to 1.51.•••* gnu/packages/perl-check.scm (perl-test-pod): Update to 1.51 [source]: Update URI. Tobias Geerinckx-Rice2017-12-14
* gnu: perl-test-mocktime: Update to 0.15.•••* gnu/packages/perl-check.scm (perl-test-mocktime): Update to 0.15 [propagated-inputs]: Add perl-time-piece. Tobias Geerinckx-Rice2017-12-14
* gnu: Add perl-time-piece.•••* gnu/packages/perl.scm (perl-time-piece): New public variable. Tobias Geerinckx-Rice2017-12-14
* gnu: notmuch: Move elisp directory and generate autoloads.•••* gnu/packages/mail.scm (notmuch)[arguments]: Move elisp files to share/emacs/site-lisp/guix.d/notmuch-<version>. Add make-autoloads phase. Arun Isaac2017-12-13
* gnu: polyml: Update to 5.7.1.•••* gnu/packages/sml.scm (polyml): Update to 5.7.1. Tobias Geerinckx-Rice2017-12-13
* gnu: guile-gdbm-ffi: Install documentation.•••* gnu/packages/guile.scm (guile-gdbm-ffi)[arguments]: Install README.md and some examples. Tidy up MKDIR-P calls. Tobias Geerinckx-Rice2017-12-13
* gnu: gtksourceview: Update to 3.24.6.•••* gnu/packages/gtk.scm (gtksourceview): Update to 3.24.6 Tobias Geerinckx-Rice2017-12-13
* vm: Use qemu drive device parameter.•••* gnu/build/vm.scm (load-in-linux-vm): Use device parameter to define drive device. Mathieu Othacehe2017-12-13
* gnu: cgit: Patch absolute file names.•••* gnu/packages/version-control.scm (cgit): Patch absolute file names. Oleg Pykhalov2017-12-13
* gnu: Add krita.•••* gnu/packages/kde.scm (krita): New variable. Signed-off-by: Kei Kebreau <kkebreau@posteo.net> Mark Meyer2017-12-12
* gnu: xfig: Update to 3.2.6a.•••* gnu/packages/xfig.scm (xfig): Update to 3.2.6a. [native-inputs]: Remove groff, imake, makedepend. Add desktop-file-utils. [inputs]: Remove libxmu and zlib. [arguments]: Remove custom phases. Add a ‘strip-bogus-exec-prefix’ phase. Run the rudimentary test suite. Tobias Geerinckx-Rice2017-12-12
* gnu: services: Add php-fpm.•••* gnu/services/web.scm (<php-fpm-configuration>, <php-fpm-process-manager-configuration>): New record types. (php-fpm-configuration?, php-fpm-process-manager-configuration?, php-fpm-service-type, nginx-php-location): New procedures. * doc/guix.texi (Web-Services): Document php-fpm service. * gnu/tests/web.scm: Add php-fpm system test. Signed-off-by: Christopher Baines <mail@cbaines.net> nee2017-12-12
* gnu: meson: Update to 0.44.0.•••* gnu/packages/build-tools.scm (meson): Update to 0.44.0 Tobias Geerinckx-Rice2017-12-12
* gnu: miniupnpc: Update to 2.0.20171212.•••* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20171212. Tobias Geerinckx-Rice2017-12-12
* gnu: global: Update to 6.6.•••* gnu/packages/code.scm (global): Update to 6.6. Efraim Flashner2017-12-12
* gnu: xfig, transfig: Update home pages.•••* gnu/packages/xfig.scm (xfig, transfig)[home-page]: Use SourceForge.net. Tobias Geerinckx-Rice2017-12-12
* gnu: Add uthash.•••* gnu/packages/datastructures.scm (uthash): New public variable. Tobias Geerinckx-Rice2017-12-12
* gnu: Add fbcat.•••* gnu/packages/linux.scm (fbcat): New public variable. Tobias Geerinckx-Rice2017-12-12
* gnu: Add snapscreenshot.•••* gnu/packages/linux.scm (snapscreenshot): New public variable. Tobias Geerinckx-Rice2017-12-12
* gnu: linux-libre: Update to 4.14.5.•••* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.5. (%linux-libre-hash): Update hash. Mark H Weaver2017-12-11
* gnu: linux-libre@4.9: Update to 4.9.68.•••* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.68. Mark H Weaver2017-12-11
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