| Commit message (Collapse) | Author | Age |
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* gnu/packages/cran.scm (r-slam): Update to 0.1-47.
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* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.1.
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* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.38.1.
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* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.16.1.
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* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.12.1.
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* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.20.1.
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* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.1.
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* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-12.f56935a.
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* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20191226.
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* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.3.1.
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* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.4.
[arguments]: Working around imagemagick and svg is no longer needed.
[native-inputs]: Replace emacs-minimal with emacs. This is needed because
bytecompilation requires fringe-bitmap support.
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* gnu/packages/kde-multimedia.scm (ffmpegthumbs): New variable.
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* gnu/packages/kde-multimedia.scm (audiocd-kio): New variable.
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* gnu/packages/kde-multimedia.scm (libkcompactdisc): New variable.
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* gnu/packages/kde-multimedia.scm (kamoso): New variable.
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* gnu/packages/kde-multimedia.scm (elisa): New variable.
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* gnu/packages/kde-multimedia.scm (kwave): New variable.
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`guix lint` reports two CVEs, both are unrelated:
- CVE-2018-5200: for vendor "pandora" and some 4.2.2.x version
- CVE-2019-9133: windows only (I assume it it alsow relates to the "pandora"
vendor, since the version the CVE refers to as "solving the issue" does not
exist at KDE.)
* gnu/packages/kde-multimedia.scm (kmplayer): New variable.
* gnu/packages/patches/kmplayer-aarch64.patch,
gnu/packages/patches/kmplayer-upstream_Fix-build-with-Qt-5.9.patch: New
files.
* gnu/local.mk: Add them.
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* gnu/packages/kde-multimedia.scm (kmix): New variable.
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* gnu/packages/kde-multimedia.scm (kaffeine): New variable.
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* gnu/packages/kde-multimedia.scm (libkcddb): New variable.
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* gnu/packages/kde-multimedia.scm (k3b): New variable.
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* gnu/packages/kde-multimedia.scm (juk): New variable.
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* gnu/packages/kde-multimedia.scm: New file.
* gnu/lokal.mk (MODULES): Add it.
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Patches should fix all CVEs reported by `guix lint`:
CVE-2015-7747; CVE-2017-6827, CVE-2017-6828, CVE-2017-6829,
CVE-2017-6830, CVE-2017-6831, CVE-2017-6832, CVE-2017-6833,
CVE-2017-6834, CVE-2017-6835, CVE-2017-6836, CVE-2017-6837,
CVE-2017-6838, CVE-2017-6839; CVE-2018-13440; CVE-2018-17095
Since the patches do not reference to CVEs, it's a bit hard to tell which
patch actually closes which CVE. Debian reports all these to be closed by
the patches below and NixPkgs provides references.
* gnu/packages/audio.scm (audiofile): New variable.
* gnu/packages/patches/audiofile-fix-datatypes-in-tests.patch,
gnu/packages/patches/audiofile-fix-sign-conversion.patch,
gnu/packages/patches/audiofile-CVE-2015-7747.patch,
gnu/packages/patches/audiofile-CVE-2018-13440.patch,
gnu/packages/patches/audiofile-CVE-2018-17095.patch,
gnu/packages/patches/audiofile-Check-the-number-of-coefficients.patch,
gnu/packages/patches/audiofile-Fail-on-error-in-parseFormat.patch,
gnu/packages/patches/audiofile-Fix-index-overflow-in-IMA.cpp.patch,
gnu/packages/patches/audiofile-Fix-multiply-overflow-sfconvert.patch,
gnu/packages/patches/audiofile-Fix-overflow-in-MSADPCM-decodeSam.patch,
gnu/packages/patches/audiofile-division-by-zero-BlockCodec-runPull.patch,
gnu/packages/patches/audiofile-hurd.patch,
gnu/packages/patches/audiofile-signature-of-multiplyCheckOverflow.patch:
New files.
* gnu/local.mk: Add them.
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https://github.com/behdad/fonttools permanently redirects to
https://github.com/fonttools/fonttools.
* gnu/packages/python-xyz.scm (python-fonttools)[home-page]: Change to current.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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Fixes <https://bugs.gnu.org/38739>. This is a follow-up to commit
88c9408070280db51d1a0e604b9ec77f1611ab3c.
* gnu/packages/wm.scm (i3-gaps)[source](sha256): Change to the correct hash.
[build-system]: Remove field, because it is superfluous.
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* gnu/packages/geo.scm (gdal)[home-page]: Use HTTPS URI.
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* gnu/packages/geo.scm (gdal)[inputs]: Add netcdf.
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* gnu/packages/geo.scm (gdal)[inputs]: Enable sqlite.
[arguments]: Add --with-sqlite3 to #:configure-flags.
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* gnu/packages/geo.scm (gdal)[inputs]: Add expat.
[arguments]: Add --with-expat to #:configure-flags.
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* gnu/packages/geo.scm (libspatialindex): Update to 1.9.3.
[build-system]: Switch to cmake-build-system.
[source]: Update URI.
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* gnu/packages/geo.scm (postgis): Update to 3.0.0.
[inputs]: Add json-c and libjpeg-turbo. Replace proj.4 with proj.
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* gnu/packages/geo.scm (gdal): Update to 3.0.2.
[inputs]: Add proj.
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* gnu/packages/patches/libgeotiff-adapt-test-script-for-proj-6.2.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/geo.scm (libgeotiff): Update to 1.5.1.
[inputs]: Replace proj.4 with proj.
[sources]: Add libgeotiff-adapt-test-script-for-proj-6.2.patch
to patches.
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* gnu/packages/geo.scm (proj): New variable.
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* gnu/packages/geo.scm (geos): Update to 3.8.0.
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* gnu/packages/python-xyz.scm (python-pyserial): Update to 3.4.
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* gnu/packages/compression.scm (squashfs-tools-next): Remove variable.
* guix/scripts/pack.scm (squashfs-image, guix-pack): Use squashfs-tools.
* tests/pack.scm: Use squashfs-tools.
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* gnu/packages/axoloti.scm (axoloti-patcher-next)[arguments]: Remove commented
substitute* expression.
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* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-11.7342280.
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The use of guile-email in this package definition seems to cause errors when
working with other packages, errors like: error: guile-email: unbound variable
I'm not sure why the version of the Guile email package is appropriate here
either, but for now just to avoid the problems, inline the current version of
the package (and add a comment so this is more obvious). This issue was
probably introduced in: c7b2b539802eaa3f969e212c98eb671a1a75e9f3
* gnu/packages/mail.scm (mumimu)[version]: Inline the current value
of (package-version guile-email) as a string.
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* gnu/packages/audio.scm (bluez-alsa)[arguments]: Install dbus configuration
files to /etc/dbus-1/system.d.
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* gnu/packages/guile-xyz.scm (artanis): Update to 0.4.1.
[inputs]: Add nss; move guile-json-1 and guile-redis from here...
[propagated-inputs]: ...to here; add guile-readline.
[arguments]: Add phase "patch-references-to-libnss".
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* gnu/packages/file-systems.scm (zfs): New variable.
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* gnu/packages/python-xyz.scm (python-funcparserlib): Fix typo in description.
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* gnu/packages/python-xyz.scm (python-pathos)[arguments]: Use custom
'check phase.
[native-inputs]: Add python-pytest.
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* gnu/packages/python-xyz.scm (python-pathos): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/video.scm (dvdbackup): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/compression.scm (squashfs-tools): Update to 4.4.
[arguments]: Remove obsolete ‘fix-glibc-compatability’ phase.
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