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* gnu: python-cryptography: Update to 2.3.1.Marius Bakke2018-09-10
| | | | | * gnu/packages/python-crypto.scm (python-cryptography-vectors, python-cryptography): Update to 2.3.1.
* gnu: cloc: Update source hash.Tobias Geerinckx-Rice2018-09-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The upstream tarball was modified in place. The only changes are: --- /gnu/store/5v39h6zjs33hj5dm2yggz5qk0mva00bs-cloc-1.78.tar.gz +++ /gnu/store/pm5ghks76vv6awv3969yvi7qxqfnfs1l-cloc-1.78.tar.gz ├── filetype from file(1) │ @@ -1 +1 @@ │ -gzip compressed data, last modified: Fri Sep 7 18:22:49 2018, from Unix │ +gzip compressed data, last modified: Sat Sep 8 14:09:43 2018, from Unix │ --- 5v39h6zjs33hj5dm2yggz5qk0mva00bs-cloc-1.78.tar ├── +++ pm5ghks76vv6awv3969yvi7qxqfnfs1l-cloc-1.78.tar │ ├── file list │ │ @@ -1,13 +1,13 @@ │ │ -rwxrwxr-x 0 al (1000) al (1000) 545021 2018-09-07 18:21:22 cloc-1.78/cloc │ │ -rwxrwxr-x 0 al (1000) al (1000) 1818 2018-09-07 18:21:22 cloc-1.78/sqlite_formatter │ │ -drwxrwxr-x 0 al (1000) al (1000) 0 2018-09-07 18:21:22 cloc-1.78/Unix/ │ │ --rwxrwxr-x 0 al (1000) al (1000) 498571 2018-09-07 18:21:22 cloc-1.78/Unix/cloc │ │ +drwxrwxr-x 0 al (1000) al (1000) 0 2018-09-08 14:09:23 cloc-1.78/Unix/ │ │ +-rwxrwxr-x 0 al (1000) al (1000) 498537 2018-09-08 14:09:22 cloc-1.78/Unix/cloc │ │ -rwxrwxr-x 0 al (1000) al (1000) 32382 2018-09-07 18:21:22 cloc-1.78/Unix/t/00_C.t │ │ -rwxrwxr-x 0 al (1000) al (1000) 12614 2018-09-07 18:21:22 cloc-1.78/Unix/t/01_opts.t │ │ -rw-rw-r-- 0 al (1000) al (1000) 862 2018-09-07 18:21:22 cloc-1.78/Unix/README │ ├── cloc-1.78/Unix/cloc │ │ @@ -1,8 +1,7 @@ │ │ -#!/usr/local/perl/5.28.0/bin/perl │ │ #!/usr/bin/env perl * gnu/packages/code.scm (cloc)[source]: Update sha256 hash.
* gnu: nano: Update to 3.0.Leo Famulari2018-09-10
| | | | * gnu/packages/nano.scm (nano): Update to 3.0.
* gnu: linux-libre: Update to 4.18.7.Mark H Weaver2018-09-10
| | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.7. (%linux-libre-hash): Update hash.
* gnu: linux-libre@4.14: Update to 4.14.69.Mark H Weaver2018-09-10
| | | | | * gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.69. (%linux-libre-4.14-hash): Update hash.
* gnu: linux-libre@4.9: Update to 4.9.126.Mark H Weaver2018-09-10
| | | | * gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.126.
* gnu: linux-libre@4.4: Update to 4.4.155.Mark H Weaver2018-09-10
| | | | * gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.155.
* gnu: gnome-mpv: Update to 0.15.Tobias Geerinckx-Rice2018-09-10
| | | | * gnu/packages/video.scm (gnome-mpv): Update to 0.15.
* gnu: fortify-headers: Update to 1.0.Tobias Geerinckx-Rice2018-09-10
| | | | * gnu/packages/suckless.scm (fortify-headers): Update to 1.0.
* gnu: python-genshi: Update to 0.7.1.Tobias Geerinckx-Rice2018-09-10
| | | | | | | | | | | | | * gnu/packages/python-web.scm (python-genshi): Update to 0.7.1. [source]: Use GIT-FETCH and GIT-FILE-NAME. Remove patches. * gnu/packages/patches/python-genshi-add-support-for-python-3.4-AST.patch, gnu/packages/patches/python-genshi-buildable-on-python-2.7.patch, gnu/packages/patches/python-genshi-disable-speedups-on-python-3.3.patch, gnu/packages/patches/python-genshi-fix-tests-on-python-3.5.patch, gnu/packages/patches/python-genshi-isstring-helper.patch, gnu/packages/patches/python-genshi-stripping-of-unsafe-script-tags.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: python-sockjs-tornado: Update to 1.0.5.Tobias Geerinckx-Rice2018-09-10
| | | | * gnu/packages/python-web.scm (python-sockjs-tornado): Update to 1.0.5.
* gnu: python-sockjs-tornado: Edit synopsis & description.Tobias Geerinckx-Rice2018-09-10
| | | | | * gnu/packages/python-web.scm (python-sockjs-tornado)[synopsis] [description]: Pick nits.
* gnu: Rename ldc.scm to dlang.scm.Pjotr Prins2018-09-10
| | | | | | * gnu/packages/ldc.scm: Rename to... * gnu/packages/dlang.scm: ... this. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu: ldc: Update to 1.10.0.Pjotr Prins2018-09-10
| | | | | | | | | | | * gnu/packages/ldc.scm (ldc): Update to 1.10.0. [native-inputs]: Switch to LLVM and CLANG. (ldc-bootstrap)[synopsis, description]: Tweak. * gnu/packages/patches/ldc-disable-phobos-tests.patch: New file. * gnu/packages/patches/ldc-1.7.0-disable-phobos-tests.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add hstr.Benjamin Slade2018-09-10
| | | | * gnu/packages/shellutils.scm (hstr): New variable.
* gnu: emacs-guix: Update to 0.5.Alex Kost2018-09-10
| | | | | | * gnu/packages/emacs.scm (emacs-guix): Update to 0.5. [propagated-inputs]: Add 'guile-gcrypt'. [arguments]: Adjust #:configure-flags accordingly.
* gnu: emacs-build-farm: Update to 0.2.1.Alex Kost2018-09-10
| | | | | * gnu/packages/emacs.scm (emacs-build-farm): Update to 0.2.1. Change source from gitlab to notabug.
* gnu: emacs-bui: Update to 1.2.0.Alex Kost2018-09-10
| | | | | * gnu/packages/emacs.scm (emacs-bui): Update to 1.2.0. Change source from github to notabug.
* gnu: Add python-pygenometracks.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/bioinformatics.scm (python-pygenometracks): New variable.
* gnu: Add python-hicexplorer.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/bioinformatics.scm (python-hicexplorer): New variable.
* gnu: Add python-cooler.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/bioinformatics.scm (python-cooler): New variable.
* gnu: Add python-pyfaidx.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/bioinformatics.scm (python-pyfaidx): New variable.
* gnu: Add python-pypairix.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/bioinformatics.scm (python-pypairix): New variable.
* gnu: Add python-intervaltree.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/bioinformatics.scm (python-intervaltree): New variable.
* gnu: Add python-dask.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-dask): New variable.
* gnu: Add python-partd.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-partd): New variable.
* gnu: Add python-blosc.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-blosc): New variable.
* gnu: Add python-locket.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-locket): New variable.
* gnu: Add python-cloudpickle.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-cloudpickle): New variable.
* gnu: Add python-sortedcontainers.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-sortedcontainers): New variable.
* gnu: Add python-cytoolz.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-cytoolz): New variable.
* gnu: Add python-toolz.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-toolz): New variable.
* gnu: Add python-multiprocess.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-multiprocess): New variable.
* gnu: Add python-dill.Ricardo Wurmus2018-09-10
| | | | * gnu/packages/python.scm (python-dill): New variable.
* gnu: python-typing: Update to 3.6.6.Tobias Geerinckx-Rice2018-09-10
| | | | * gnu/packages/python.scm (python-typing): Update to 3.6.6.
* gnu: tinyproxy: Update to 1.10.0.Tobias Geerinckx-Rice2018-09-10
| | | | | * gnu/packages/web.scm (tinyproxy): Update to 1.10.0. [native-inputs]: Remove asciidoc.
* gnu: spectrwm: Update to 3.2.0.Tobias Geerinckx-Rice2018-09-10
| | | | | * gnu/packages/wm.scm (spectrwm): Update to 3.2.0. [arguments]: Remove 'fix-freetype-include' phase.
* gnu: Add yad.Mădălin Ionel Patrașcu2018-09-10
| | | | | | * gnu/packages/gtk.scm (yad): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: hpcguix-web: Update to 53e09ea.Ludovic Courtès2018-09-10
| | | | * gnu/packages/web.scm (hpcguix-web): Update to 53e09ea.
* services: hpcguix-web: Produce a log file and rotate it.Ludovic Courtès2018-09-10
| | | | | | | * gnu/services/web.scm (%hpcguix-web-log-file) (%hpcguix-web-log-rotations): New variables. (hpcguix-web-shepherd-service): Pass #:log-file. (hpcguix-web-service-type): Extend ROTTLOG-SERVICE-TYPE.
* services: tailon: Move to (gnu services web).Ludovic Courtès2018-09-10
| | | | | | | | | | | | | | | This allows (gnu services admin) to remain deeper in the module graph and to be used by (gnu services web). * gnu/services/admin.scm (<tailon-configuration-file>) (tailon-configuration-files-string) (tailon-configuration-file-compiler, <tailon-configuration>) (tailon-shepherd-service, %tailon-accounts) (tailon-service-type): Move to... * gnu/services/web.scm: ... here. * gnu/tests/admin.scm: Remove. Move test to... * gnu/tests/web.scm (%tailon-os) (run-tailon-test, %test-tailon): ... here.
* gnu: youtube-dl: Update to 2018.08.04.Alex Vong2018-09-10
| | | | * gnu/packages/video.scm (youtube-dl): Update to 2018.08.04.
* gnu: Add asignify.Leo Famulari2018-09-09
| | | | * gnu/packages/crypto.scm (asignify): New variable.
* gnu: certbot: Update to 0.27.1.Leo Famulari2018-09-09
| | | | | | | * gnu/packages/tls.scm (python-acme): Update to 0.27.1. [arguments]: Use invoke. (certbot): Update to 0.27.1. [native-inputs]: Use python-sphinx-1.6.
* gnu: libgd: Fix CVE-2018-{5711,1000222}.Leo Famulari2018-09-09
| | | | | | | * gnu/packages/patches/gd-CVE-2018-1000222.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gd.scm (gd/fixed): New variable. * gnu/packages/php.scm (gd-for-php)[source]: Use 'gd-CVE-2018-1000222.patch'.
* gnu: r-chron: Update to 2.3-53.Ricardo Wurmus2018-09-09
| | | | * gnu/packages/statistics.scm (r-chron): Update to 2.3-53.
* gnu: r-annotationhub: Update to 2.12.1.Ricardo Wurmus2018-09-09
| | | | * gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.12.1.
* gnu: r-chippeakanno: Update to 3.14.2.Ricardo Wurmus2018-09-09
| | | | * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.2.
* gnu: Update texmaker to 5.0.2.Roel Janssen2018-09-09
| | | | * gnu/packages/tex.scm (texmaker): Update to 5.0.2.
* gnu: ghostscript: Update replacement to 9.24 [security fixes].Marius Bakke2018-09-09
| | | | | | | | | | | | | | | | | | The following CVEs are fixed with this release: CVE-2018-15908, CVE-2018-15909, CVE-2018-15910, CVE-2018-15911, CVE-2018-16509, CVE-2018-16510, CVE-2018-16511, CVE-2018-16513, CVE-2018-16539, CVE-2018-16540, CVE-2018-16541, CVE-2018-16542, CVE-2018-16543. * gnu/packages/patches/ghostscript-CVE-2018-10194.patch: Delete file. * gnu/packages/patches/ghostscript-CVE-2018-16509.patch, gnu/packages/patches/ghostscript-bug-699708.patch: New files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ghostscript.scm (ghostscript/fixed): Update to 9.24. [source](patches): Remove 'ghostscript-CVE-2018-10194.patch' and 'ghostscript-runpath.patch'. Add 'ghostscript-CVE-2018-16509.patch' and 'ghostscript-bug-699708.patch'. [arguments]: Add LDFLAGS to #:configure-flags, and a phase to create output directory.
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