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* gnu: r-mast: Add r-knitr to native inputs.Ricardo Wurmus2020-03-25
| | | | * gnu/packages/bioconductor.scm (r-mast)[native-inputs]: Add r-knitr.
* gnu: poetry: Update to 1.0.5.Tanguy Le Carrour2020-03-24
| | | | | | | | | | | * gnu/packages/python-xyz.scm (poetry): Update to 1.0.5. [propagated-inputs] Add python-clikit, python-importlib-metadata, python-keyring, and python-pexpect. Remove python-msgpack and python-glob2. [home-page] Update URL. [arguments] Remove 'patch-setup-py' phase, and adjust required versions of keyring, pyrsistent and importlib-metadata. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-cachy: Update to 0.3.0.Tanguy Le Carrour2020-03-24
| | | | | | | | * gnu/packages/python-xyz.scm (python-cachy): Update to 0.3.0. [arguments]: Replace the 'check' phase. [native-inputs]: Add memcached and python-pifpaf. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add python-pifpaf.Tanguy Le Carrour2020-03-24
| | | | | | * gnu/packages/python-xyz.scm (python-pifpaf): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add python-daiquiri.Tanguy Le Carrour2020-03-24
| | | | | | * gnu/packages/python-xyz.scm (python-daiquiri): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add python-json-logger.Tanguy Le Carrour2020-03-24
| | | | | | * gnu/packages/python-xyz.scm (python-json-logger): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add python-xattr.Tanguy Le Carrour2020-03-24
| | | | | | * gnu/packages/python-xyz.scm (python-xattr): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-fakeredis: Update to 1.2.1.Tanguy Le Carrour2020-03-24
| | | | | | | * gnu/packages/databases.scm (python-fakeredis): Update to 1.2.1. [propagated-inputs]: Add python-sortedcontainers. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-clikit: Update to 0.4.2.Tanguy Le Carrour2020-03-24
| | | | | | * gnu/packages/python-xyz.scm (python-clikit): Update to 0.4.2. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-sortedcontainers: Add missing propagated-inputs.Tanguy Le Carrour2020-03-24
| | | | | | | | * gnu/packages/python-xyz.scm (python-sortedcontainers): [propagated-inputs] Add python-appdirs, python-distlib, python-filelock, python-importlib-metadata and python-six. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-cachecontrol: Add missing propagated-input.Tanguy Le Carrour2020-03-24
| | | | | | | * gnu/packages/python-web.scm (python-cachecontrol): [propagated-inputs]: Add python-msgpack. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-msgpack: Update to 1.0.0.Tanguy Le Carrour2020-03-24
| | | | | | | | * gnu/packages/python-xyz.scm (python-msgpack): Update to 1.0.0. (python-msgpack-transitional)[version,source]: New fields to avoid updating this package. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-pastel: Update to 0.2.0.Tanguy Le Carrour2020-03-24
| | | | | | * gnu/packages/graphics.scm (python-pastel): Update to 0.2.0. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-jsonschema: Update to 3.2.0.Tanguy Le Carrour2020-03-24
| | | | | | | | * gnu/packages/python-xyz.scm (python-jsonschema): Update to 3.2.0. [propagated-inputs]: Add python-importlib-metadata. [arguments]: Use add-installed-pythonpath to make a test pass. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: python-pexpect: Update to 4.8.0.Tanguy Le Carrour2020-03-24
| | | | | | | * gnu/packages/python-xyz.scm (python-pexpect): Update to 4.8.0. [arguments]: Disable failing test. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: perl-mail-sendmail: Add line above definition.Paul Garlick2020-03-24
| | | | * gnu/packages/perl.scm (perl-mail-sendmail): Add line.
* gnu: Add perl-mail-sendmail.Paul Garlick2020-03-24
| | | | * gnu/packages/perl.scm (perl-mail-sendmail): New variable.
* gnu: Add Docusign API Python client.Josh Marshall2020-03-24
| | | | | | * gnu/packages/python-xyz.scm (python-docusign-esign): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: automake: Add version 1.16.2.Ludovic Courtès2020-03-24
| | | | * gnu/packages/autotools.scm (automake-1.16.2): New variable.
* gnu: Add guile3.0-semver.Martin Becze2020-03-24
| | | | | | * gnu/packages/guile-xyz.scm (guile3.0-semver): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: nano: Update to 4.9.Efraim Flashner2020-03-24
| | | | * gnu/packages/nano.scm (nano): Update to 4.9.
* gnu: Add qgis.Guillaume Le Vaillant2020-03-24
| | | | | | | * gnu/packages/geo.scm (qgis): New variable. Co-authored-by: Wiktor Żelazny <wzelazny@vurv.cz> Co-authored-by: Arun Isaac <arunisaac@systemreboot.net>
* gnu: Add saga.Guillaume Le Vaillant2020-03-24
| | | | * gnu/packages/geo.scm (saga): New variable.
* gnu: Add grass.Guillaume Le Vaillant2020-03-24
| | | | * gnu/packages/geo.scm (grass): New variable.
* gnu: Add python-owslib.Guillaume Le Vaillant2020-03-24
| | | | * gnu/packages/python-xyz.scm (python-owslib): New variable.
* gnu: r-harmony: Update to 0.1.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/cran.scm (r-harmony): Update to 0.1. [native-inputs]: Add autoconf.
* gnu: r-shiny: Update to 1.4.0.2.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/cran.scm (r-shiny): Update to 1.4.0.2.
* gnu: r-multiassayexperiment: Update to 1.12.5.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.5. [native-inputs]: Add r-knitr.
* gnu: r-bigpint: Update to 1.2.2.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioconductor.scm (r-bigpint): Update to 1.2.2. [native-inputs]: Add r-knitr.
* gnu: r-biosigner: Update to 1.14.4.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.4.
* gnu: r-gosemsim: Update to 2.12.1.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.12.1. [native-inputs]: Add r-knitr.
* gnu: r-tximport: Update to 1.14.2.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioinformatics.scm (r-tximport): Update to 1.14.2. [native-inputs]: Add r-knitr.
* gnu: r-caret: Update to 6.0-86.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/cran.scm (r-caret): Update to 6.0-86. [native-inputs]: Add r-knitr.
* gnu: r-batchtools: Update to 0.9.13.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/cran.scm (r-batchtools): Update to 0.9.13. [native-inputs]: Add r-knitr.
* gnu: r-mcmc: Update to 0.9-7.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/cran.scm (r-mcmc): Update to 0.9-7.
* gnu: r-proc: Update to 1.16.2.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/cran.scm (r-proc): Update to 1.16.2.
* gnu: r-xgboost: Update to 1.0.0.1.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/cran.scm (r-xgboost): Update to 1.0.0.1. [native-inputs]: Add r-knitr.
* gnu: r-radiant-data: Update to 1.3.4.Ricardo Wurmus2020-03-24
| | | | | | * gnu/packages/cran.scm (r-radiant-data): Update to 1.3.4. [propagated-inputs]: Remove r-gridextra; add r-mass, r-patchwork, and r-randomizr.
* gnu: r-patchwork: Update to 1.0.0.Ricardo Wurmus2020-03-24
| | | | | | * gnu/packages/cran.scm (r-patchwork): Update to 1.0.0. [source]: Fetch from CRAN. [native-inputs]: Add r-knitr.
* gnu: r-igraph: Update to 1.2.5.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/graph.scm (r-igraph): Update to 1.2.5.
* gnu: r-robustbase: Update to 0.93-6.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/statistics.scm (r-robustbase): Update to 0.93-6.
* gnu: r-hmisc: Update to 4.4-0.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/statistics.scm (r-hmisc): Update to 4.4-0.
* gnu: r-pkgmaker: Update to 0.31.1.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/statistics.scm (r-pkgmaker): Update to 0.31.1.
* gnu: r-dt: Update to 0.13.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/statistics.scm (r-dt): Update to 0.13. [native-inputs]: Add r-knitr.
* gnu: r-locfit: Update to 1.5-9.2.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.2.
* gnu: Add r-randomizr.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/cran.scm (r-randomizr): New variable.
* gnu: sbcl: Increase maximum heap size to 2Gb.Guillaume Le Vaillant2020-03-24
| | | | | * gnu/packages/lisp.scm (sbcl)[arguments]: Add the "--dynamic-space-size=2Gb" option in the build phase.
* gnu: dialog: Update to 1.3-20200228.Michael Rohleder2020-03-23
| | | | | | * gnu/packages/ncurses.scm (dialog): Update to 1.3-20200228. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Git: Update to 2.26.0.Leo Famulari2020-03-23
| | | | | * gnu/packages/version-control.scm (git): Update to 2.26.0. [arguments]: Adjust the 'install-credential-netrc' phase to upstream changes.
* Revert "gnu: youtube-dl: Add 'ffmpeg' as input."Mathieu Othacehe2020-03-23
| | | | This reverts commit 4233e74b39635d5ef4dde204ecc26dcc894d9467.
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