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* gnu: Remove ghc-parsec, ghc-stm, ghc-text, ghc-xhtml.Robert Vollmert2019-08-07
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | These are ghc-8.4-bundled packages, removing to avoid build conflicts. * gnu/packages/haskell.scm (ghc-parsec, ghc-stm, ghc-text): Remove. * gnu/packages/haskell-web.scm (ghc-xhtml): Remove. * gnu/packages/agda.scm (agda)[inputs]: Remove ghc-stm and ghc-text. * gnu/packages/bioinformatics.scm (ngless)[inputs]: Remove ghc-parsec and ghc-text. * gnu/packages/haskell-apps.scm (darcs)[inputs]: Remove ghc-parsec. (git-annex)[inputs]: Remove ghc-stm and ghc-text. (ghc-sdl2)[inputs]: Remove ghc-text. (ghc-sdl2-image)[inputs]: Remove ghc-text. * gnu/packages/haskell-check.scm (ghc-tasty-ant-xml)[inputs]: Remove ghc-stm. (ghc-tasty)[inputs]: Remove ghc-stm. (ghc-tasty-rerun)[inputs]: Same. (ghc-quickcheck-instances)[inputs]: Remove ghc-text. (ghc-hedgehog)[inputs]: Remove ghc-stm. * gnu/packages/haskell-crypto.scm (ghc-asn1-encoding)[inputs]: Remove ghc-text. * gnu/packages/haskell-web.scm (ghc-tagsoup)[inputs]: Remove ghc-text. (ghc-cookie)[inputs]: Same. (ghc-http-types)[inputs]: Same. (ghc-http)[inputs]: Remove ghc-parsec. (ghc-http-client)[inputs]: Remove ghc-text. (ghc-http2)[inputs]: Remove ghc-stm. (ghc-http-conduit)[native-inputs]: Remove ghc-text. (ghc-wai)[inputs]: Same. (ghc-wai-extra)[inputs]: Same. (ghc-warp)[inputs]: Remove ghc-stm and ghc-text. (ghc-xss-sanitize)[native-inputs]: Remove ghc-text. (ghc-css-text)[inputs]: Same. (ghc-mime-types)[inputs]: Same. (ghc-blaze-html)[inputs]: Same. (ghc-aeson)[inputs]: Same. (ghc-aeson-pretty)[inputs]: Same. (ghc-aeson-qq)[inputs]: Remove ghc-text and ghc-parsec. (ghc-multipart)[inputs]: Remove ghc-parsec. (ghc-uri-encode)[inputs]: Remove ghc-text. (ghc-path-pieces)[inputs]: Same. (ghc-yesod-core)[inputs]: Remove ghc-text and ghc-parsec. (ghc-yesod-persistent)[inputs]: Remove ghc-text. (ghc-yesod-form)[inputs]: Same. (ghc-yesod)[inputs]: Same. (ghc-hxt-regex-xmlschema)[inputs]: Remove ghc-parsec and ghc-text. (ghc-hxt)[inputs]: Remove ghc-parsec. * gnu/packages/haskell.scm (ghc-convertible)[inputs]: Remove ghc-text. (ghc-double-conversion)[inputs]: Same. (ghc-tree-diff)[inputs]: Remove ghc-parsec and ghc-text. [native-inputs]: Remove ghc-parsec. (ghc-cgi)[inputs]: Remove ghc-parsec. (hlint)[inputs]: Remove ghc-text. (ghc-openglraw)[inputs]: Remove ghc-text. (ghc-opengl)[inputs]: Same. (ghc-streaming-commons)[inputs]: Remove ghc-stm and ghc-text. (ghc-hackage-security)[inputs]: Remove ghc-parsec. (cabal-install)[inputs]: Remove ghc-stm. (ghc-parsec-numbers)[inputs]: Remove ghc-parsec. (ghc-safesemaphore)[inputs]: Remove ghc-stm. (ghc-text-binary)[inputs]: Remove ghc-text. (ghc-hashable)[inputs]: Remove ghc-text. (ghc-transformers-base)[inputs]: Remove ghc-stm. (ghc-indents)[inputs]: Remove ghc-parsec. (ghc-regex-tdfa-rc)[inputs]: Same. (ghc-regex-tdfa-text)[inputs]: Same. (ghc-regex)[inputs]: Remove ghc-text. (ghc-parsers)[inputs]: Remove ghc-parsec and ghc-text. (ghc-attoparsec)[inputs]: Remove ghc-text. (ghc-attoparsec-bootstrap)[inputs]: Same. (ghc-zip-archive)[inputs]: Same. (ghc-polyparse)[inputs]: Same. (ghc-reducers)[inputs]: Same. (ghc-xml)[inputs]: Same. (ghc-feed)[inputs]: Same. (ghc-exceptions)[inputs]: Remove ghc-stm. (ghc-case-insensitive)[inputs]: Remove ghc-text. (ghc-megaparsec)[inputs]: Same. (ghc-network-uri)[inputs]: Remove ghc-parsec. (ghc-monad-control)[inputs]: Remove ghc-stm. (ghc-blaze-builder)[inputs]: Remove ghc-text. (ghc-blaze-markup)[inputs]: Same. (ghc-async)[inputs]: Remove ghc-stm. (ghc-invariant)[inputs]: Same. (ghc-statevar)[inputs]: Same. (ghc-lens)[inputs]: Remove ghc-text. (ghc-cheapskate)[inputs]: Same. (ghc-semigroups)[inputs]: Same. (ghc-semigroups-bootstrap)[inputs]: Same. (ghc-fast-logger)[inputs]: Same. (ghc-scientific)[inputs]: Same. (ghc-scientific-bootstrap)[inputs]: Same. (ghc-texmath)[inputs]: Remove ghc-parsec. (ghc-highlighting-kate)[inputs]: Same. (ghc-cmark)[inputs]: Remove ghc-text. (ghc-cmark-gfm)[inputs]: Same. (ghc-th-lift-instances)[inputs]: Same. (ghc-yaml)[inputs]: Same. (ghc-hslua)[inputs]: Same. (ghc-hslua-module-text)[inputs]: Same. (ghc-skylighting-core)[inputs]: Same. (ghc-doctemplates)[inputs]: Remove ghc-text and ghc-parsec. (ghc-pandoc)[inputs]: Same. (ghc-typed-process)[inputs]: Remove ghc-stm. (ghc-conduit-extra)[inputs]: Remove ghc-stm and ghc-text. (ghc-xml-types)[inputs]: Remove ghc-text. (ghc-xml-conduit)[inputs]: Same. (ghc-pandoc-citeproc)[inputs]: Remove ghc-text and ghc-parsec. (ghc-regex-tdfa)[inputs]: Remove ghc-parsec. (ghc-wl-pprint-text)[inputs]: Remove ghc-text. (ghc-graphviz)[inputs]: Same. (ghc-system-filepath-bootstrap)[inputs]: Same. (ghc-system-fileio-bootstrap)[inputs]: Same. (ghc-shelly)[inputs]: Same. (ghc-chell)[inputs]: Same. (ghc-system-filepath)[inputs]: Same. (ghc-system-fileio)[inputs]: Same. (ghc-fsnotify)[inputs]: Same. (ghc-json)[inputs]: Remove ghc-text and ghc-parsec. (ghc-esqueleto)[inputs]: Remove ghc-text. (shellcheck)[inputs]: Remove ghc-parsec. (ghc-errors)[inputs]: Remove ghc-text. (ghc-chunked-data)[inputs]: Same. (ghc-uuid-types)[inputs]: Same. (ghc-uuid)[inputs]: Same. (ghc-rebase)[inputs]: Remove ghc-stm and ghc-text. (ghc-foldl)[inputs]: Remove ghc-text. (ghc-mono-traversable)[inputs]: Same. (ghc-conduit-combinators)[inputs]: Same. (ghc-aws)[inputs]: Same. (ghc-stm-chans)[inputs]: Remove ghc-stm. (ghc-monad-logger)[inputs]: Remove ghc-text and ghc-stm. (ghc-shakespeare)[inputs]: Remove ghc-parsec and ghc-text. (ghc-resource-pool)[inputs]: Remove ghc-stm. (ghc-attoparsec-iso8601)[inputs]: Remove ghc-text. (ghc-http-api-data)[inputs]: Same. (ghc-persistent)[inputs]: Same. (ghc-aeson-compat)[inputs]: Same. (ghc-persistent-template)[inputs]: Same. (ghc-unliftio)[inputs]: Remove ghc-stm. (ghc-persistent-sqlite)[native-inputs]: Remove ghc-text. (ghc-bytes)[inputs]: Same. (ghc-missingh)[inputs]: Remove ghc-parsec. (ghc-rio)[inputs]: Remove ghc-text. (ghc-cairo)[inputs]: Same. (ghc-atomic-write)[inputs]: Remove ghc-text. [native-inputs]: Same. (ghc-stm-conduit)[inputs]: Remove ghc-stm. (ghc-conduit-algorithms)[inputs]: Same. (ghc-interpolate)[native-inputs]: Remove ghc-text. (ghc-hpack)[inputs]: Same. (ghc-inline-c)[inputs]: Remove ghc-parsec. (ghc-configurator)[inputs]: Remove ghc-text. (ghc-c2hs)[native-inputs]: Same. (ghc-libmpd)[inputs]: Same. (ghc-concurrent-output)[inputs]: Remove ghc-stm. * gnu/packages/idris.scm (idris)[inputs]: Remove ghc-text. * gnu/packages/wm.scm (xmobar)[inputs]: Remove ghc-parsec and ghc-stm. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add ghc-8.6.Robert Vollmert2019-08-07
| | | | | | * gnu/packages/haskell.scm (ghc-8.6): New variable. Co-authored-by: Timothy Sample <samplet@ngyro.com>
* gnu: ghc-8: Rename to 'ghc-8.4'.Robert Vollmert2019-08-07
| | | | | | * gnu/packages/haskell.scm (ghc-8): Rename to... (ghc-8.4): ...this. (ghc-8): New variable.
* gnu: wpa-supplicant: Update to 2.9.Marius Bakke2019-08-08
| | | | * gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.9.
* gnu: xf86-video-intel: Update to 2.99.917-14.6f4972d.Marius Bakke2019-08-08
| | | | * gnu/packages/xorg.scm (xf86-video-intel): Update to 2.99.917-14.6f4972d.
* machine: Add 'build-locally?' field for managed hosts.Jakob L. Kreuze2019-08-07
| | | | | | * gnu/machine/ssh.scm (machine-ssh-configuration-build-locally?): New variable. (managed-host-remote-eval): Pass 'build-locally?' to 'remote-eval'.
* Merge remote-tracking branch 'origin/master' into wip-texliveRicardo Wurmus2019-08-07
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| * reconfigure: Improve tests for system activation.Jakob L. Kreuze2019-08-07
| | | | | | | | | | | | * gnu/tests/reconfigure.scm (run-switch-to-system-test): Assert that '/run/current-system' points to the activated system, and that new user accounts specified in the operating system declaration are created.
| * gnu: igt-gpu-tools: Rework custom phases.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/admin.scm (igt-gpu-tools)[arguments]: Use custom 'autogen phase to replace 'bootstrap phase.
| * gnu: dosbox: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/emulators.scm (dosbox)[arguments]: Remove unneeded 'autogen phase.
| * gnu: zimg: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/image.scm (zimg)[arguments]: Remove unneeded 'autogen phase.
| * gnu: leptonica: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/image.scm (leptonica)[arguments]: Remove unneeded 'autogen phase.
| * gnu: ghmm: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/machine-learning.scm (ghmm)[arguments]: Remove unneeded 'autogen phase.
| * gnu: ghmm: Update source file-name field.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/machine-learning.scm (ghmm)[source]: Change 'file-name field to include '-checkout' string.
| * gnu: dovecot-libsodium-plugin: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/mail.scm (dovecot-libsodium-plugin)[arguments]: Remove unneeded 'autogen phase.
| * gnu: dovecot-trees: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/mail.scm (dovecot-trees)[arguments]: Remove unneeded 'autogen phase.
| * gnu: libetpan: Rework custom phases.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/mail.scm (libetpan)[arguments]: Use custom 'autogen phase to replace 'boostrap phase.
| * gnu: libmediainfo: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/video.scm (libmediainfo)[arguments]: Remove unneeded 'autogen phase.
| * gnu: libsmpeg: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/video.scm (libsmpeg)[arguments]: Remove unnecessary 'autogen phase.
| * gnu: vapoursynth: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/video.scm (vapoursynth)[arguments]: Remove unneeded 'autogen phase.
| * gnu: i3blocks: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/wm.scm (i3blocks)[arguments]: Remove unneeded 'autogen phase.
| * gnu: ocproxy: Remove extra build phase.Efraim Flashner2019-08-07
| | | | | | | | | | * gnu/packages/vpn.scm (ocproxy)[arguments]: Remove unneeded 'autogen phase.
| * gnu: openconnect: Fix propagated-inputs.Efraim Flashner2019-08-07
| | | | | | | | | | | | * gnu/packages/vpn.scm (openconnect)[inputs]: Move libxml2, gnutls, zlib ... [propagated-inputs]: ... to here.
| * gnu: gnome-maps: Fix runtime error.Ricardo Wurmus2019-08-07
| | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/35761>. * gnu/packages/geo.scm (gnome-maps)[arguments]: Add lib output of gnome-online-accounts and geocode-glib to LD_LIBRARY_PATH. [inputs]: Add gnome-online-accounts:lib.
| * gnu: r-dt: Update to 0.8.Ricardo Wurmus2019-08-07
| | | | | | | | | | * gnu/packages/statistics.scm (r-dt): Update to 0.8. [propagated-inputs]: Add r-jsonlite.
| * gnu: r-epi: Update to 2.38.Ricardo Wurmus2019-08-07
| | | | | | | | * gnu/packages/cran.scm (r-epi): Update to 2.38.
| * gnu: r-ggpubr: Update to 0.2.2.Ricardo Wurmus2019-08-07
| | | | | | | | | | * gnu/packages/cran.scm (r-ggpubr): Update to 0.2.2. [propagated-inputs]: Add r-rlang.
| * gnu: r-tinytex: Update to 0.15.Ricardo Wurmus2019-08-07
| | | | | | | | * gnu/packages/cran.scm (r-tinytex): Update to 0.15.
| * gnu: r-servr: Update to 0.15.Ricardo Wurmus2019-08-07
| | | | | | | | * gnu/packages/cran.scm (r-servr): Update to 0.15.
| * gnu: dolphin-emu: Update to commit 24718c1.Rutger Helling2019-08-07
| | | | | | | | * gnu/packages/emulators.scm (dolphin-emu): Update to commit 24718c1.
| * gnu: linux-libre: Update to 5.2.7.Mark H Weaver2019-08-07
| | | | | | | | | | * gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.7. (linux-libre-5.2-pristine-source)[hash]: Update hash.
| * gnu: linux-libre@4.19: Update to 4.19.65.Mark H Weaver2019-08-07
| | | | | | | | | | * gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.65. (linux-libre-4.19-pristine-source)[hash]: Update hash.
| * gnu: linux-libre@4.14: Update to 4.14.137.Mark H Weaver2019-08-07
| | | | | | | | | | * gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.137. (linux-libre-4.14-pristine-source)[hash]: Update hash.
| * gnu: linux-libre@4.9: Update to 4.9.188.Mark H Weaver2019-08-07
| | | | | | | | | | * gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.188. (linux-libre-4.9-pristine-source)[hash]: Update hash.
| * gnu: linux-libre@4.4: Update to 4.4.188.Mark H Weaver2019-08-07
| | | | | | | | | | * gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.188. (linux-libre-4.4-pristine-source)[hash]: Update hash.
| * gnu: r-ggplotify: Update to 0.0.4.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/cran.scm (r-ggplotify): Update to 0.0.4.
| * gnu: r-bayestestr: Update to 0.2.5.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/cran.scm (r-bayestestr): Update to 0.2.5.
| * machine: Implement safety checks.Jakob L. Kreuze2019-08-06
| | | | | | | | | | | | * gnu/machine/ssh.scm (machine-check-file-system-availability) (machine-check-initrd-modules, check-deployment-sanity): New variable. (deploy-managed-host): Perform safety checks before deploying.
| * machine: Rename 'system' field.Jakob L. Kreuze2019-08-06
| | | | | | | | | | | | | | | | * gnu/machine.scm (machine-system): Delete variable. (machine-operating-system): New variable. All callers changed. * doc/guix.texi (Invoking guix deploy): Use the 'machine-operating-system' accessor rather than 'machine-system'.
| * gnu: perl-hash-merge: Change inputs to propagated-inputs.Christopher Baines2019-08-06
| | | | | | | | | | | | | | | | Clone::Choose is required at runtime, so this input needs to be propagated. This change fixes the sqitch package. * gnu/packages/perl.scm (perl-hash-merge)[inputs]: Change to propagated-inputs.
| * gnu: ffmpeg: Update to 4.2.Rutger Helling2019-08-06
| | | | | | | | | | | | * gnu/packages/video.scm (ffmpeg): Update to 4.2. [inputs]: Add dav1d. * gnu/packages/video.scm (ffmpeg-3.4)[arguments]: Adjust inheritance.
| * gnu: r-rsubread: Update to 1.34.6.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.6.
| * gnu: r-abaenrichment: Update to 1.14.1.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.14.1.
| * gnu: r-atacseqqc: Update to 1.8.5.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.5.
| * gnu: r-genomicinteractions: Update to 1.18.1.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.1.
| * gnu: r-chippeakanno: Update to 3.18.2.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.2.
| * gnu: r-msnid: Update to 1.18.1.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioinformatics.scm (r-msnid): Update to 1.18.1.
| * gnu: r-rcas: Update to 1.10.1.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.1.
| * gnu: r-genomicfeatures: Update to 1.36.4.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.4.
| * gnu: r-rtracklayer: Update to 1.44.2.Ricardo Wurmus2019-08-06
| | | | | | | | * gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.2.
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