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* gnu: vim: Update to 8.0.Efraim Flashner2016-09-12
| | | | | * gnu/packages/vim.scm (vim): Update to 8.0. [arguments]: Update files which need /bin/sh patched.
* gnu: bowtie: Update to 2.2.9.Leo Famulari2016-09-12
| | | | * gnu/packages/bioinformatics.scm (bowtie): Update to 2.2.9.
* gnu: certbot: Improve synopsis.Leo Famulari2016-09-12
| | | | * gnu/packages/tls.scm (certbot)[synopsis]: Add authorship information.
* gnu: Add acme-client.Leo Famulari2016-09-12
| | | | * gnu/packages/tls.scm (acme-client): New variable.
* gnu: gnutls: Replace with 3.5.4 [fixes GNUTLS-SA-2016-3].Leo Famulari2016-09-12
| | | | | * gnu/packages/tls.scm (gnutls)[replacement]: New field. (gnutls-3.5.4): New variable.
* gnu: Add nfs-utilsJohn Darrington2016-09-12
| | | | | * gnu/packages/nfs.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: r-org-mm-eg-db: Update to 3.3.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.3.0.
* gnu: r-org-dm-eg-db: Update to 3.3.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.3.0.
* gnu: r-org-ce-eg-db: Update to 3.3.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.3.0.
* gnu: r-org-hs-eg-db: Update to 3.3.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.3.0.
* gnu: r-go-db: Update to 3.3.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-go-db): Update to 3.3.0.
* gnu: r-rmarkdown: Update to 1.0.Ricardo Wurmus2016-09-12
| | | | | * gnu/packages/statistics.scm (r-rmarkdown): Update to 1.0. [propagated-inputs]: Add "r-jsonlite" and "r-base64enc".
* gnu: r-dplyr: Update to 0.5.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-dplyr): Update to 0.5.0.
* gnu: r-rcpparmadillo: Update to 0.7.400.2.0.Ricardo Wurmus2016-09-12
| | | | | * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.400.2. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.400.2.0.
* gnu: r-tidyr: Update to 0.6.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-tidyr): Update to 0.6.0.
* gnu: r-irlba: Update to 2.1.1.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-irlba): Update to 2.1.1.
* gnu: r-dt: Update to 0.2.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-dt): Update to 0.2.
* gnu: r-sparsem: Update to 1.72.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-sparsem): Update to 1.72.
* gnu: r-lambda-r: Update to 1.1.9.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-lambda-r): Update to 1.1.9.
* gnu: r-futile-logger: Update to 1.4.3.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-futile-logger): Update to 1.4.3.
* gnu: r-lattice: Update to 0.20-34.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-lattice): Update to 0.20-34.
* gnu: r-plotrix: Update to 3.6-3.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-plotrix): Update to 3.6-3.
* gnu: r-readr: Update to 1.0.0.Ricardo Wurmus2016-09-12
| | | | | * gnu/packages/statistics.scm (r-readr): Update to 1.0.0. [propagated-inputs]: Add "r-hms", "r-tibble", and "r-r6".
* gnu: Add r-hms.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-hms): New variable.
* gnu: Add r-tibble.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-tibble): New variable.
* gnu: r-withr: Update to 1.0.2.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-withr): Update to 1.0.2.
* gnu: r-devtools: Update to 1.12.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-devtools): Update to 1.12.0.
* gnu: r-rstudioapi: Update to 0.6.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-rstudioapi): Update to 0.6.
* gnu: r-httr: Update to 1.2.1.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-httr): Update to 1.2.1.
* gnu: r-openssl: Update to 0.9.4.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-openssl): Update to 0.9.4.
* gnu: r-rversions: Update to 1.0.3.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-rversions): Update to 1.0.3.
* gnu: r-multitaper: Update to 1.0-12.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-multitaper): Update to 1.0-12.
* gnu: r-xml2: Update to 1.0.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-xml2): Update to 1.0.0.
* gnu: r-r6: Update to 2.1.3.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-r6): Update to 2.1.3.
* gnu: r-crayon: Update to 1.3.2.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-crayon): Update to 1.3.2.
* gnu: r-knitr: Update to 1.14.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-knitr): Update to 1.14.
* gnu: r-mime: Update to 0.5.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-mime): Update to 0.5.
* gnu: r-dbi: Update to 0.5-1.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-dbi): Update to 0.5-1.
* gnu: r-lazyeval: Update to 0.2.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.0.
* gnu: r-stringr: Update to 1.1.0.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-stringr): Update to 1.1.0.
* gnu: r-stringi: Update to 1.1.1.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-stringi): Update to 1.1.1.
* gnu: r-plyr: Update to 1.8.4.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-plyr): Update to 1.8.4.
* gnu: r-permute: Update to 0.9-4.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-permute): Update to 0.9-4.
* gnu: r-mgcv: Update to 1.8-14.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-mgcv): Update to 1.8-14.
* gnu: r-rcpp: Update to 0.12.7.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-rcpp): Update to 0.12.7.
* gnu: r-digest: Update to 0.6.10.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/statistics.scm (r-digest): Update to 0.6.10.
* gnu: r-biocparallel: Update to 1.6.6.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.6.
* gnu: r-genomicranges: Update to 1.24.3.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.3.
* gnu: r-limma: Update to 3.28.21.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.21.
* gnu: r-variantannotation: Update to 1.18.7.Ricardo Wurmus2016-09-12
| | | | * gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.7.
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