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* gnu: Add r-oai.Wiktor Żelazny2020-03-21
| | | | | | * gnu/packages/cran.scm (r-oai): new variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add r-latex2exp.Wiktor Żelazny2020-03-21
| | | | | | * gnu/packages/cran.scm (r-latex2exp): new variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add r-httpcode.Wiktor Żelazny2020-03-21
| | | | | | * gnu/packages/cran.scm (r-httpcode): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: global: Add 'python-wrapper' as input.wednesday2020-03-21
| | | | | * gnu/packages/code.scm (global)[inputs]: Add 'python-wrapper' to fix tagging python code.
* Revert "gnu: Remove qemu-minimal@2.10."Marius Bakke2020-03-21
| | | | | | This package was still in use by american-fuzzy-lop. This reverts commit 559f37328851fc1ae1d90f27fab7beff3d804421.
* gnu: gpgme: Fix build.Tobias Geerinckx-Rice2020-03-21
| | | | | | Reported by joshuaBPMan on #guix. * gnu/packages/gnupg.scm (gpgme)[arguments]: Add ‘disable-failing-test’ phase.
* gnu: python-pygraphviz: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/graphviz.scm (python-pygraphviz)[home-page]: Use HTTPS.
* gnu: python-tables: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python-tables)[home-page]: Use HTTPS.
* gnu: python-future: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python-future)[home-page]: Use HTTPS.
* gnu: python-scrypt: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-crypto.scm (python-scrypt)[home-page]: Use HTTPS.
* gnu: python-scikit-learn: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/machine-learning.scm (python-scikit-learn)[home-page]: Use HTTPS.
* gnu: python2-pyro: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python2-pyro)[home-page]: Use HTTPS.
* gnu: python2-element-tree: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python2-element-tree)[home-page]: Use HTTPS.
* gnu: python-cheetah: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python-cheetah)[home-page]: Use HTTPS.
* gnu: python-kivy: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python-kivy)[home-page]: Use HTTPS.
* gnu: Add gnome-shell-extension-topicons-redux.Ekaitz Zarraga2020-03-21
| | | | | | | * gnu/packages/gnome-xyz.scm (gnome-shell-extension-topicons-redux): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: ghc-extra: Downgrade to 1.6.21.Alexandru-Sergiu Marton2020-03-21
| | | | | | * gnu/packages/haskell-xyz.scm (ghc-extra): Downgrade to 1.6.21. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Remove qemu-minimal@2.10.Marius Bakke2020-03-21
| | | | * gnu/packages/virtualization.scm (qemu-minimal-2.10): Remove variable.
* gnu: Remove flex@2.6.1.Marius Bakke2020-03-21
| | | | * gnu/packages/flex.scm (flex-2.6.1): Remove variable.
* gnu: GRUB: Use the latest version of QEMU for tests.Marius Bakke2020-03-21
| | | | | * gnu/packages/bootloaders.scm (grub)[native-inputs]: Change from QEMU-MINIMAL-2.10 to QEMU-MINIMAL.
* gnu: GRUB: Build with the latest version of Flex.Marius Bakke2020-03-21
| | | | | * gnu/packages/bootloaders.scm (grub)[native-inputs]: Change from FLEX-2.6.1 to FLEX.
* gnu: python-grpcio: Update to 1.27.2.Marius Bakke2020-03-21
| | | | | | | * gnu/packages/rpc.scm (python-grpcio): Update to 1.27.2. [source](modules, snippet): New fields. [arguments]: Add phases to use system libraries and the correct compiler. [inputs]: Add C-ARES, OPENSSL, and ZLIB.
* gnu: TensorFlow: Correct gRPC input.Marius Bakke2020-03-21
| | | | | | * gnu/packages/machine-learning.scm (tensorflow)[native-inputs]: Move GRPC:STATIC ... [inputs]: ... here.
* gnu: gRPC: Update to 1.27.3.Marius Bakke2020-03-21
| | | | | | | | | | * gnu/packages/rpc.scm (grpc): Update to 1.27.3. [arguments]: Add "-DgRPC_ABSL_PROVIDER=package" in #:configure-flags. [inputs]: Add ABSEIL-CPP. (grpc-1.16.1): New public variable. * gnu/packages/hyperledger.scm (hyperledger-iroha)[inputs]: Change from GRPC to GRPC-1.16. * gnu/packages/machine-learning.scm (tensorflow)[native-inputs, inputs]: Likewise.
* gnu: python-gast: Update to 0.3.3.Marius Bakke2020-03-21
| | | | * gnu/packages/python-xyz.scm (python-gast): Update to 0.3.3.
* gnu: go-gopkg.in-mgo.v2: Use HTTPS home page.base-for-series-3245Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/databases.scm (go-gopkg.in-mgo.v2)[home-page]: Use HTTPS.
* gnu: lua5.2-expat: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/lua.scm (lua5.2-expat)[home-page]: Use HTTPS.
* gnu: git-test-sequence: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/version-control.scm (git-test-sequence)[home-page]: Use HTTPS.
* gnu: ogre: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/graphics.scm (ogre)[home-page]: Use HTTPS.
* gnu: ruby-sequel: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/ruby.scm (ruby-sequel)[home-page]: Use HTTPS.
* gnu: ruby-rspec: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/ruby.scm (ruby-rspec)[home-page]: Use HTTPS.
* gnu: opencl-clhpp: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/opencl.scm (opencl-clhpp)[home-page]: Use HTTPS.
* gnu: gnupg: Update to 2.2.20 [security fix].Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/gnupg.scm (gnupg): Update to 2.2.20.
* gnu: Add emacs-objed.6033fe7de85d2020-03-21
| | | | | | *gnu/packages/emacs-xyz.scm (emacs-objed): New variable. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
* gnu: blktrace: Update to db4f634.base-for-series-3238Vincent Legoll2020-03-21
| | | | | | | | | | * gnu/packages/linux.scm (blktrace): Update to db4f634. [revision]: Increment variable. [patches]: Remove variable. * gnu/packages/patches/blktrace-use-rmtree.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
* gnu: coreutils: Improve description.Vitaliy Shatrov2020-03-21
| | | | | | | * gnu/packages/base.scm (coreutils): Improve description and state that there is no shell included. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
* gnu: Add r-boa.Danny Milosavljevic2020-03-21
| | | | | | * gnu/packages/cran.scm (r-boa): New variable. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: Add r-crochet.Naga Malleswari2020-03-21
| | | | | | * gnu/packages/cran.scm (r-crochet): New variable. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: Add hash-extender.Jakub Kądziołka2020-03-21
| | | | | | * gnu/packages/crypto.scm (hash-extender): New variable. * gnu/packages/patches/hash-extender-test-suite.patch: New file. * gnu/local.mk (dist_patch_DATA): Register the new file.
* gnu: python-grpcio: Move to (gnu packages rpc).Marius Bakke2020-03-21
| | | | | * gnu/packages/python-xyz.scm (python-grpcio): Move from here ... * gnu/packages/rpc.scm (python-grpcio): ... to here.
* gnu: gRPC: Move to (gnu packages rpc).Marius Bakke2020-03-21
| | | | | | | * gnu/packages/machine-learning.scm (grpc): Move to ... * gnu/packages/rpc.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly. * gnu/packages/hyperledger.scm: Adjust module imports.
* gnu: python-language-server: Build with python-jedi@0.15.2.Marius Bakke2020-03-21
| | | | | | * gnu/packages/python-xyz.scm (python-language-server)[propagated-inputs]: Remove PYTHON-JEDI. Add PYTHON-JEDI-0.15. (python-jedi-0.15, python-parso-0.5): New public variables.
* gnu: python-django: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/django.scm (python-django)[home-page]: Use HTTPS.
* gnu: python2-s3cmd: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/python-xyz.scm (python2-s3cmd)[home-page]: Use HTTPS.
* gnu: rsync: Use system zlib and popt libraries.Tobias Geerinckx-Rice2020-03-21
| | | | | | | | | | Reduce our likelihood of contracting security bugs at the expense of compression ratio (in some cases) and compatibility with rsync≤3.1.1. rsync@3.1.2 was released in 2014. Time to upgrade your CentOS box. * gnu/packages/rsync.scm (rsync)[inputs]: Add popt and zlib. [arguments]: Use them.
* gnu: perl-archive-zip: Update to 1.68.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/perl-compression.scm (perl-archive-zip): Update to 1.68.
* gnu: guile3.0-syntax-highlight: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/guile-xyz.scm (guile3.0-syntax-highlight)[home-page]: Use HTTPS.
* gnu: guile-rsvg: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/gtk.scm (guile-rsvg)[home-page]: Use HTTPS.
* gnu: hdf-eos2: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/maths.scm (hdf-eos2)[home-page]: Use HTTPS.
* gnu: ruby-omniauth: Update to 1.9.1.Tobias Geerinckx-Rice2020-03-21
| | | | * gnu/packages/ruby.scm (ruby-omniauth): Update to 1.9.1.
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