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* gnu: Add r-bsgenome-mmusculus-ucsc-mm10.Ricardo Wurmus2016-06-15
| | | | | * gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10): New variable.
* gnu: openssl: Fix CVE-2016-2177 and CVE-2016-2178.Leo Famulari2016-06-15
| | | | | | | * gnu/packages/patches/openssl-CVE-2016-2177.patch, gnu/packages/patches/openssl-CVE-2016-2178.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/tls.scm (openssl/fixed): Use them.
* gnu: Add python-wcwidth and python2-wcwidth.Danny Milosavljevic2016-06-15
| | | | | | * gnu/packages/python.scm (python-wcwidth, python2-wcwidth): New variables. Co-authored-by: Leo Famulari <leo@famulari.name>
* gnu: Add log4cpp.Ricardo Wurmus2016-06-15
| | | | | * gnu/packages/logging.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: Add gengetopt.Ricardo Wurmus2016-06-15
| | | | * gnu/packages/popt.scm (gengetopt): New variable.
* gnu: Add teensy-loader-cli.Hartmut Goebel2016-06-15
| | | | | | | | * gnu/packages/flashing-tools.scm (teensy-loader-cli): New variable. * gnu/packages/patches/teensy-loader-cli-help.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: grue-hunter: Move to (gnu packages games).Ludovic Courtès2016-06-15
| | | | | | * gnu/packages/grue-hunter.scm: Remove. Move contents to... * gnu/packages/games.scm (grue-hunter): ... here. New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu: pumpa: Build with qtbase.Efraim Flashner2016-06-15
| | | | * gnu/packages/pumpio.scm (pumpa)[inputs]: Remove qt, add qtbase.
* gnu: pinentry-qt: Build with qtbase.Efraim Flashner2016-06-15
| | | | * gnu/packages/gnupg.scm (pinentry-qt)[inputs]: Remove qt, add qtbase.
* gnu: Add qttools.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qttools): New variable.
* gnu: Add qtlocation.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtlocation): New variable.
* gnu: Add qtwebchannel.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtwebchannel): New variable.
* gnu: Add qtserialport.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtserialport): New variable.
* gnu: Add qtwayland.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtwayland): New variable.
* gnu: Add qtmultimedia.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtmultimedia): New variable.
* gnu: Add qtsensors.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtsensors): New variable.
* gnu: Add qtwebsockets.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtwebsockets): New variable.
* gnu: Add qtconnectivity.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtconnectivity): New variable.
* gnu: Add qtdeclarative.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtdeclarative): New variable.
* gnu: Add qtxmlpatterns.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtxmlpatterns): New variable.
* gnu: Add qtx11extras.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtx11extras): New variable.
* gnu: Add qtimageformats.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtimageformats): New variable.
* gnu: Add qtsvg.Efraim Flashner2016-06-15
| | | | * gnu/packages/qt.scm (qtsvg): New variable.
* gnu: julia: Use unbundled release tarball.Ricardo Wurmus2016-06-14
| | | | | | | | | * gnu/packages/julia.scm (julia)[source]: Use smaller tarball without bundled sources. [inputs]: Add inputs for rmath-julia, suitesparse, objconv, dsfmt, and virtualenv. [arguments]: Add phase "prepare-deps" to copy tarballs to their expected locations.
* gnu: perl-dbi: Update to 1.636.Efraim Flashner2016-06-14
| | | | | * gnu/packages/databases.scm (perl-dbi): Update to 1.636. [home-page]: Update it.
* gnu: perl-exporter-lite: Update to 0.08.Efraim Flashner2016-06-14
| | | | | * gnu/packages/perl.scm (perl-exporter-lite): Update to 0.08. [home-page]: Update it.
* gnu: perl-image-exiftool: Update to 10.20.Efraim Flashner2016-06-14
| | | | | * gnu/packages/photo.scm (perl-image-exiftool): Update to 10.20. [home-page]: Update it.
* gnu: perl-test-deep: Update to 1.120.Efraim Flashner2016-06-14
| | | | | * gnu/packages/perl.scm (perl-test-deep): Update to 1.120. [home-page]: Update it.
* gnu: perl-xml-libxml: Update to 2.0125.Efraim Flashner2016-06-14
| | | | * gnu/packages/xml.scm (perl-xml-libxml): Update to 2.0125.
* gnu: perl-xml-simple: Update to 2.22.Efraim Flashner2016-06-14
| | | | | | * gnu/packages/xml.scm (perl-xml-simple): Update to 2.22. [propagated-inputs]: Add perl-xml-sax. [home-page]: Update it.
* gnu: parallel: Update to 20160522.Efraim Flashner2016-06-14
| | | | * gnu/packages/parallel.scm (parallel): Update to 20160522.
* gnu: youtube-dl: Update to 2016.06.14.Alex Vong2016-06-14
| | | | | | | | * gnu/packages/video.scm (youtube-dl): Update to 2016.06.14. [source]: Use https. [home-page]: Use https. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add gnome-shell-extensions.David Thompson2016-06-13
| | | | * gnu/packages/gnome.scm (gnome-shell-extensions): New variable.
* gnu: Add ruby-bio-kseq.Ben Woodcroft2016-06-14
| | | | * gnu/packages/bioinformatics.scm (ruby-bio-kseq): New variable.
* gnu: wget: Update to 1.18.Ludovic Courtès2016-06-13
| | | | * gnu/packages/wget.scm (wget): Update to 1.18.
* gnu: wayland: Update to 1.11.0.Efraim Flashner2016-06-13
| | | | * gnu/packages/freedesktop.scm (wayland): Update to 1.11.0.
* gnu: python-pykafka: Change uri.Efraim Flashner2016-06-13
| | | | * gnu/packages/python.scm (python-pykafka)[source]: Update pypi uri.
* gnu: giac-xcas: Update to 1.2.2-59Nicolas Goaziou2016-06-13
| | | | | | * gnu/packages/algebra.scm (giac-xcas): Update to 1.2.2-59. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: asymptote: Update to 2.38Nicolas Goaziou2016-06-13
| | | | | | * gnu/packages/plotutils.scm (asymptote): Update to 2.38. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-tables.Ricardo Wurmus2016-06-13
| | | | | * gnu/packages/python.scm (python-tables, python2-tables): New variables.
* gnu: piranha: Update to 1.2.1.Ricardo Wurmus2016-06-13
| | | | * gnu/packages/bioinformatics.scm (piranha): Update to 1.2.1.
* gnu: unison: Install unison-fsmonitor.Orivej Desh2016-06-12
| | | | | | | * gnu/packages/ocaml.scm (unison)[arguments]: Add 'install-fsmonitor' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add emacs-rainbow-identifiers.Roel Janssen2016-06-12
| | | | * gnu/packages/emacs.scm (emacs-rainbow-identifiers): New variable.
* gnu: imagemagick: Update to 6.9.4-9.Leo Famulari2016-06-12
| | | | * gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.4-9.
* gnu: manaplus: Update to 1.6.6.4.Alex Kost2016-06-12
| | | | * gnu/packages/games.scm (manaplus): Update to 1.6.6.4.
* gnu: Add arc-icon-theme.David Thompson2016-06-11
| | | | * gnu/packages/gnome.scm (arc-icon-theme): New variable.
* gnu: Add moka-icon-theme.David Thompson2016-06-11
| | | | * gnu/packages/gnome.scm (moka-icon-theme): New variable.
* gnu: Add arc-theme.David Thompson2016-06-11
| | | | * gnu/packages/gnome.scm (arc-theme): New variable.
* gnu: wireshark: Update to 2.0.4 [security fixes].Leo Famulari2016-06-11
| | | | | | Fixes CVE-2016-{5350, 5351, 5352, 5353, 5354, 5355, 5356, 5357, 5358, 5359}. * gnu/packages/networking.scm (wireshark): Update to 2.0.4.
* gnu: libmicrohttpd: Update to 0.9.50.ng02016-06-11
| | | | | | * gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.50. Signed-off-by: Leo Famulari <leo@famulari.name>
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