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* Revert "gnu: guile-cairo: Switch to Guile 2.2."•••This commit caused the build of grub-image.png to fail, prevent the build of grub.cfg and reconfiguring of GuixSD: <https://bugs.gnu.org/27551> This reverts commit e3ddb1e83296c10338d35bc687772242b2f5eac6. Leo Famulari2017-07-01
* gnu: guile-git: Update source URL.•••* gnu/packages/guile.scm (guile-git)[source]: Update URL. Leo Famulari2017-07-01
* gnu: cd-hit: Update to 4.6.8.•••* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.6.8. Ben Woodcroft2017-07-01
* gnu: bwa: Update to 0.7.15.•••* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.15. Ben Woodcroft2017-07-01
* gnu: btrfs-progs: Update to 4.11.1.•••* gnu/packages/linux.scm (btrfs-progs): Update to 4.11.1. Tobias Geerinckx-Rice2017-07-01
* gnu: tor: Update to 0.3.0.9 [fixes CVE-2017-0377].•••* gnu/packages/tor.scm (tor): Update to 0.3.0.9. Tobias Geerinckx-Rice2017-07-01
* gnu: Add emacs-exwm-x.•••* gnu/packages/emacs.scm (emacs-exwm-x): New variable. Feng Shu2017-06-30
* gnu: Add emacs-switch-window.•••* gnu/packages/emacs.scm (emacs-switch-window): New variable. Feng Shu2017-06-30
* gnu: guile-cairo: Switch to Guile 2.2.•••This patch adjusts dependent packages accordingly. * gnu/packages/gtk.scm (guile-cairo)[inputs]: Switch to GUILE-2.2 and GUILE-LIB. (guile-rsvg)[inputs]: Likewise. (guile-present)[inputs]: Likewise. (guile-gnome)[inputs]: Likewise. * gnu/packages/plotutils.scm (guile-charting)[inputs]: Switch go GUILE-2.2. Ludovic Courtès2017-06-30
* gnu: guile-gnome: Update to 2.16.5.•••* gnu/packages/gtk.scm (guile-gnome): Update to 2.16.5. [arguments] <pre-configure>: Use @GUILE_EFFECTIVE_VERSION@ instead of "2.0". [properties]: New field. Ludovic Courtès2017-06-30
* gnu: guile-rsvg: Update to commit 05c6a2fd.•••* gnu/packages/gtk.scm (guile-rsvg): Update to commit 05c6a2fd. [source](url): Change to gitlab.com. (snippet): Use @GUILE_EFFECTIVE_VERSION@ instead of "2.0". * gnu/packages/patches/guile-rsvg-pkgconfig.patch: Use "$GUILE_EFFECTIVE_VERSION" instead of "2.0". Ludovic Courtès2017-06-30
* gnu: guile-lib: Switch to Guile 2.2.•••* gnu/packages/guile.scm (guile-lib)[inputs]: Replace GUILE-2.0 with GUILE-2.2. (guile2.0-lib): New variable. (guile2.2-lib): Mark as deprecated. * gnu/packages/guile.scm (guile-ics): Use GUILE2.0-LIB. * gnu/packages/gtk.scm (guile-cairo, guile-rsvg) (guile-present, guile-gnome): Likewise. * gnu/packages/skribilo.scm (skribilo): Likewise. Ludovic Courtès2017-06-30
* gnu: guile-lib: Update to 0.2.5.1.•••* gnu/packages/guile.scm (guile-lib): Update to 0.2.5.1. Ludovic Courtès2017-06-30
* gnu: npth: Update to 1.5.•••* gnu/packages/gnupg.scm (npth): Update to 1.5. Leo Famulari2017-06-30
* gnu: libreoffice: Update to 5.3.2.2.•••* gnu/packages/libreoffice.scm (libreoffice): Update to 5.3.2.2. Leo Famulari2017-06-30
* gnu: hwloc: Add "lib" and "debug" outputs.•••* gnu/packages/mpi.scm (hwloc)[outputs]: New field. [arguments]: Add 'avoid-circular-references' phase. (openmpi)[inputs]: Use the "lib" output of HWLOC. * gnu/packages/parallel.scm (slurm)[inputs]: Likewise. Ludovic Courtès2017-06-30
* gnu: hwloc: Use /var as the localstatedir.•••* gnu/packages/mpi.scm (hwloc)[arguments]: Add #:configure-flags. Ludovic Courtès2017-06-30
* gnu: Add mkvtoolnix.•••* gnu/packages/video.scm (mkvtoolnix): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Gregor Giesen2017-06-30
* gnu: Add libmatroska.•••* gnu/packages/video.scm (libmatroska): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Gregor Giesen2017-06-30
* gnu: Add libebml.•••* gnu/packages/xml.scm (libebml): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Gregor Giesen2017-06-30
* gnu: Add nlohmann-json-cpp.•••* gnu/packages/serialization.scm (nlohmann-json-cpp): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Gregor Giesen2017-06-30
* gnu: isc-dhcp: Update bundled bind to 9.9.10-P2 [fixes CVE-2017-{3142,3143}].•••* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.10-P2. Leo Famulari2017-06-30
* gnu: bind: Update to 9.11.1-P2 [fixes CVE-2017-{3142,3143}].•••* gnu/packages/dns.scm (isc-bind): Update to 9.11.1-P2. Leo Famulari2017-06-30
* gnu: Add jo.•••* gnu/packages/web.scm (jo): New variable. Arun Isaac2017-06-30
* gnu: Add emacs-org-edit-latex.•••* gnu/packages/emacs.scm (emacs-org-edit-latex): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> Oleg Pykhalov2017-06-30
* gnu: itpp: Use texlive-tiny and ghostscript.•••* gnu/packages/maths.scm (itpp)[native-inputs]: Replace texlive-minimal with texlive-tiny; add ghostscript. Ricardo Wurmus2017-06-30
* gnu: gnuplot: Use texlive-tiny.•••* gnu/packages/maths.scm (gnuplot)[native-inputs]: Replace texlive-minimal with texlive-tiny. Ricardo Wurmus2017-06-30
* gnu: giac-xcas: Use texlive-tiny.•••* gnu/packages/algebra.scm (giac-xcas)[inputs]: Replace texlive-minimal with texlive-tiny. Ricardo Wurmus2017-06-30
* gnu: pari-gp: Use texlive-tiny.•••* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Replace texlive-minimal with texlive-tiny. Ricardo Wurmus2017-06-30
* gnu: po4a: Use texlive-tiny.•••* gnu/packages/gettext.scm (po4a)[native-inputs]: Replace texlive-minimal with texlive-tiny. Ricardo Wurmus2017-06-30
* gnu: linux-libre: Update to 4.11.8.•••* gnu/packages/linux.scm (%linux-libre-version): Update to 4.11.8. (%linux-libre-hash): Update hash. Mark H Weaver2017-06-30
* gnu: linux-libre@4.9: Update to 4.9.35.•••* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.35. Mark H Weaver2017-06-30
* gnu: linux-libre@4.4: Update to 4.4.75.•••* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.75. Mark H Weaver2017-06-30
* gnu: linux-libre@4.1: Update to 4.1.42 [mitigates CVE-2017-1000364].•••* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.42. Mark H Weaver2017-06-30
* gnu: poppler: Fix CVE-2017-{9775,9776}.•••* gnu/packages/pdf.scm (poppler)[replacement]: New field. (poppler-0.56.0): New variable. (poppler-qt4, poppler-qt5): Use 'package/inherit'. Leo Famulari2017-06-29
* gnu: thermald: Add file-name for source.•••* gnu/packages/admin.scm (thermald)[source]: Add file-name field. Efraim Flashner2017-06-29
* gnu: thermald: Only build on i686 and x86_64.•••* gnu/packages/admin.scm (thermald)[supported-systems]: New field. Efraim Flashner2017-06-29
* gnu: libgcrypt: Add mitigation for CVE-2017-7526.•••* gnu/packages/gnupg.scm (libgcrypt)[replacment]: New field. (libgcrypt-1.7.8): New variable. (libgcrypt-1.5)[replacment]: New field. Efraim Flashner2017-06-29
* gnu: mes: Update to 0.8.•••* gnu/packages/mes.scm (mes): Update to 0.8. Jan Nieuwenhuizen2017-06-29
* gnu: Add mescc-tools.•••* gnu/packages/mes.scm (mescc-tools): New variable. Jan Nieuwenhuizen2017-06-29
* gnu: libxfce4ui: Do not propagate gtk+-2.•••Propagation of both gtk+ and gtk+-2 causes a conflict to be detected, preventing the installation of xfce. * gnu/packages/xfce.scm (libxfce4ui)[propagated-inputs]: Move "gtk+-2"... [inputs]: ...to here. (garcon)[inputs]: Add "gtk+-2". (xfce4-appfinder)[inputs]: Add "gtk+-2". (xfce4-power-manager)[inputs]: Add "gtk+-2". (ristretto)[inputs]: Add "gtk+-2". Ricardo Wurmus2017-06-29
* gnu: xfce: Build union instead of propagating inputs.•••* gnu/packages/xfce.scm (xfce)[propagated-inputs]: Move all... [inputs]: ...here. [arguments]: Build a union. Ricardo Wurmus2017-06-29
* gnu: clojure: Update "tools-reader-src" to 1.0.0.•••* gnu/packages/java.scm (clojure)[inputs]: Update "tools-reader-src" to 1.0.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Vong2017-06-29
* gnu: Add procenv.•••* gnu/packages/linux.scm (procenv): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Dave Love2017-06-29
* gnu: ansible: Apply experimental patch to deal with wrapping of ansible script.•••See <http://lists.gnu.org/archive/html/bug-guix/2017-05/msg00015.html> for the rationale. * gnu/packages/patches/ansible-wrap-program-hack.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (ansible)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jelle Licht2017-06-29
* gnu: node: Update to 8.1.2.•••* gnu/packages/node.scm (node): Update to 8.1.2. (node)[arguments]: Disabled more tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jelle Licht2017-06-29
* gnu: lapack: Install libraries to PREFIX/lib, not PREFIX/lib64.•••This fixes a regression introduced in ef39a17717a10a7f406730258acfdb07934c7255, which would break python-scipy ("undefined reference to `zungqr_'"). * gnu/packages/maths.scm (lapack)[arguments]: Add "-DCMAKE_INSTALL_LIBDIR" to #:configure-flags. Ludovic Courtès2017-06-29
* gnu: ovmf: Only build 32-bit firmware on i686-linux.•••* gnu/packages/firmware.scm (ovmf)[arguments]: Only when the build machine is x86_64-linux should the 64-bit firmware be built and installed. Efraim Flashner2017-06-29
* gnu: openh264: Fix building on armhf and aarch64.•••* gnu/packages/video.scm (openh264)[arguments]: Add 'CC=gcc' to the #:make-flags. Efraim Flashner2017-06-29
* gnu: r-spams: Update to 2.6-2017-03-22.•••* gnu/packages/statistics.scm (r-spams): Update to 2.6-2017-03-22. [arguments]: Remove R-3.3 work-around and syntax fixes, add phase to prevent tuning r-spams to the compiling hardware. Efraim Flashner2017-06-29
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