| Commit message (Collapse) | Author | Age |
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* gnu/packages/patches/screen-fix-info-syntax-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/screen.scm (screen)[source]: Use it.
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* gnu/packages/compression.scm (lz4): Update to 1.7.5.
[source]: Update source URL. Use patch 'lz4-fix-test-failures.patch'.
[home-page]: Update URL.
* gnu/packages/patches/lz4-fix-test-failures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/mail.scm (alpine): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/tls.scm (certbot)[arguments]: Use substitute-keyword-arguments to
inherit from python-acme.
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* gnu/packages/tls.scm (certbot, python-acme, python2-acme): Update to 0.13.0.
[arguments]: Add 'patch-dependency' phase.
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* gnu/packages/mail.scm (python-django-mailman3)[inputs]: Balance them.
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* gnu/packages/mail.scm (postorius): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/mail.scm (python-django-mailman3): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/django.scm (python-django-gravatar2): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/django.scm (python-django-allauth): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/python.scm (python-openid): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/xml.scm (python-defusedxml): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
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* gnu/packages/video.scm (you-get): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (octave)[inputs]: Add gl2ps.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/gl.scm (gl2ps): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-3.
[arguments]: Remove build phase "revert-test-deletion".
[native-inputs]: Remove "r-vegan-delete-tests-patch".
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* gnu/packages/statistics.scm (r-stringi): Update to 1.1.5.
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* gnu/packages/calendar.scm (khal): Update to 0.9.5.
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* gnu/packages/mail.scm (dovecot-trees): Update to 2.1.0.
(source): Change to use 'url-fetch'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/admin.scm (intel-gpu-tools): New variable.
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* gnu/packagages/emacs.scm (emacs-symon): Update to 20160630 (this is
the latest tag available from the upstream).
[source]: Use github instead of melpa.
[home-page]: Update.
Signed-off-by: Alex Kost <alezost@gmail.com>
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Suggested-by Ivan Vilata i Balaguer <ivan@selidor.net>.
Fixes <https://bugs.gnu.org/26367>.
* gnu/packages/emacs.scm (emacs-adaptive-wrap): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
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* gnu/packages/emacs.scm (emacs-debbugs): Update to 0.14.
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* gnu/packages/linux.scm (perf)[inputs]: Add libiberty.
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* gnu/packages/ratpoison.scm (ratpoison): Update to 1.4.9.
[inputs]: Remove libxinerama. Add libxrandr.
Signed-off-by: Leo Famulari <leo@famulari.name>
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The only version of webkit supported by guitarix is unmaintained and contains a
large number of security vulnerabilities, and should be removed from Guix.
* gnu/packages/audio.scm (guitarix)[inputs]: Remove webkitgtk/gtk+-2.
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* gnu/packages/version-control.scm (myrepos)[arguments]: Use
'modify-phases' syntax.
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* gnu/packages/version-control.scm (myrepos): Update to 1.20170129.
[source]: Source tarballs have been removed from Github, use
git-download to download from upstream repository.
[home-page]: Use https.
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* gnu/packages/games.scm (gnubik): Update to 2.4.3.
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* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.3.
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Fixes CVE-2016-{9602,9603} and CVE-2017-{2615,2620,2630,5667,5931}.
* gnu/packages/qemu.scm (qemu): Update to 2.8.1.
* gnu/packages/patches/qemu-CVE-2017-2615.patch,
gnu/packages/patches/qemu-CVE-2017-2620.patch,
gnu/packages/patches/qemu-CVE-2017-2630.patch,
gnu/packages/patches/qemu-CVE-2017-5667.patch,
gnu/packages/patches/qemu-CVE-2017-5931.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
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* gnu/packages/suckless.scm (surf): Update to 2.0.
[inputs]: Replace webkitgtk/gtk+-2 with webkitgtk.
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That way the closure of flann:out is down from 1 GiB
to 290 MiB.
* gnu/packages/maths.scm (flann)[outputs]: New field.
[arguments]: Add 'set-octave-directory' phase.
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* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.1.
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Armadillo versions 7.800 and onwards are licensed under the Apache License
2.0.
* gnu/packages/maths.scm (armadillo)[license]: Change to ASL 2.0.
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* gnu/packages/regex.scm (re2): Update to 2017-04-01.
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* gnu/packages/image-viewers.scm (feh): Update to 2.18.3.
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* gnu/packages/libusb.scm (libusb): Update to 1.0.21.
[home-page]: Update to new URL.
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* gnu/packages/libusb.scm (libmtp): Update to 1.1.13.
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* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.6.
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* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-6.
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This package is no longer useful, because upstream does not keep the tarballs
of older releases. We use the bundled armadillo sources in the
r-rccparmadillo package instead.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Remove variable.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.700.0.0.
[source]: Do not delete bundled armadillo sources, because upstream no longer
hosts previous versions.
[propagated-inputs]: Remove "armadillo-for-rcpparmadillo".
[arguments]: Remove because we no longer need to link with the armadillo
library.
* gnu/packages/bioinformatics.scm (r-deseq2)[arguments]: Remove because we no
longer need to link with armadillo library.
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* gnu/packages/maths.scm (armadillo): Update to 7.800.2.
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* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.16.1.
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* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.32.1.
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* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.12.2.
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* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.8.2.
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* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.20.3.
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* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.13.
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