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* gnu: linux-libre-headers: Update to 4.9.59.Efraim Flashner2017-11-01
| | | | * gnu/packages/linux.scm (linux-libre-headers): Update to 4.9.59.
* Merge remote-tracking branch 'origin/python-updates' into core-updatesEfraim Flashner2017-10-26
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| * gnu: python@3.6: Fix building on aarch64.Efraim Flashner2017-10-20
| | | | | | | | * gnu/packages/python.scm (python@3.6)[source]: Remove another test.
| * gnu: python-coverage: Update to 4.4.1.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-coverage): Update to 4.4.1.
| * gnu: python-unittest2: Update to 1.1.0.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-unittest2): Update to 1.1.0. [source]: Use PYPI-URI. Add two patches. [arguments]: Add phase to run tests. [propagated-inputs]: Add PYTHON-SIX and PYTHON-TRACEBACK2. (python2-unittest2): Use 'package-with-python2'. * gnu/packages/patches/python2-unittest2-remove-argparse.patch: Rename to ... * gnu/packages/patches/python2-unittest2-remove-argparse.patch: ... this. * gnu/packages/patches/python-unittest2-python3-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
| * gnu: python-jinja2: Remove workaround for < Python 3.6.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-jinja2)[arguments]: Remove field.
| * gnu: Remove python-mock@1.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-mock): Update to 2.0.0. [native-inputs]: Add PYTHON-UNITTEST2. [propagated-inputs]: Add PYTHON-PBR and PYTHON-SIX. [arguments]: Override 'check' phase. [properties]: Declare python2 variant. (python2-mock)[propagated-inputs]: Add PYTHON2-FUNCTOOLS32 and PYTHON2-FUNCSIGS. (python-mock-2): Remove variable. * gnu/packages/python.scm (python-flake8)[native-inputs]: Adjust accordingly. * gnu/packages/tls.scm (python-acme, certbot)[native-inputs]: Likewise.
| * gnu: Add python2-funcsigs.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python2-funcsigs): New variable.
| * gnu: python-flake8: Update to 3.4.1.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-flake8): Update to 3.4.1. [source]: Remove obsolete snippet. [arguments]: Override 'check' phase. [propagated-inputs]: Remove PYTHON-PEP8. Add PYTHON-PYCODESTYLE and PYTHON-SETUPTOOLS. [native-inputs]: Change PYTHON-MOCK to PYTHON-MOCK-2. Remove PYTHON-NOSE. Add PYTHON-PYTEST-BOOTSTRAP and PYTHON-PYTEST-RUNNER. [properties]: Declare python2 variant. * gnu/packages/python.scm (python-flake8)[propagated-inputs]: Add PYTHON2-ENUM and PYTHON2-CONFIGPARSER.
| * gnu: Add python2-enum.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python2-enum): New variable.
| * gnu: Fix pytest dependency cycle.Marius Bakke2017-10-19
| | | | | | | | | | * gnu/packages/python.scm (python-traceback2, python-linecache2)[native-inputs]: Use PYTHON-PBR-MINIMAL instead of PYTHON-PBR.
| * gnu: python-mock@2: Add dependency on python-six.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-mock-2)[propagated-inputs]: Add PYTHON-SIX.
| * gnu: python-mccabe: Update to 0.6.1.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-mccabe): Update to 0.6.1.
| * gnu: python-pyflakes: Update to 1.5.0.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-pyflakes): Update to 1.5.0.
| * gnu: python-pytest: Update to 3.2.3.Marius Bakke2017-10-19
| | | | | | | | | | | | | | * gnu/packages/python.scm (python-pytest): Update to 3.2.3. [native-inputs]: Add PYTHON-SETUPTOOLS-SCM. (python-pytest)[native-inputs]: Likewise. (python2-pytest)[native-inputs]: Remove PYTHON2-ENUM34.
| * gnu: python-setuptools-scm: Update to 1.15.6.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-setuptools-scm): Update to 1.15.6.
| * gnu: python-pytest: Add a minimal variant for bootstrapping.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-pytest-bootstrap, python2-pytest-bootstrap): New variables. (python-six, python-hypothesis, python-pytest-runner, python-mccabe)[native-inputs]: Use PYTHON-PYTEST-BOOTSTRAP instead of PYTHON-PYTEST.
| * gnu: Remove python-pytest@2.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-pytest): Update to 3.0.7. [source]: Move substitution to ... [arguments]: ... here. Incorporate phase from pytest-3.0. [native-inputs]: Add PYTHON-HYPOTHESIS. (python-pytest-3.0): Remove variable. (python2-pytest-3.0): Rename to ... (python2-pytest): ... this. [native-inputs]: Add PYTHON2-ENUM34. * gnu/packages/backup.scm (borg)[native-inputs]: Replace PYTHON-PYTEST-3.0 with PYTHON-PYTEST. * gnu/packages/calendar.scm (khal): Likewise. * gnu/packages/databases.scm (python-orator): Likewise. * gnu/packages/python.scm (python-sphinx-1.6, python-sphinx-1.5.3, python-pexpect, python-cryptography, python-pyopenssl, python-pytest-warnings, python-pytest-capturelog, python-pytest-catchlog, python-marshmallow, python-apispec, python-flasgger, python-pyjwt, python-grako, python-honcho): Likewise. * gnu/packages/web.scm (python-internetarchive): Likewise.
| * gnu: python-six: Update to 1.11.0.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-six): Update to 1.11.0.
| * gnu: python-six: Really enable tests.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-six)[arguments]: Override 'check' phase.
| * gnu: python-py: Update to 1.4.34.Marius Bakke2017-10-19
| | | | | | | | * gnu/packages/python.scm (python-py, python2-py): Update to 1.4.34.
| * gnu: python@3: Update to 3.6.3.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-3.5-fix-tests.patch: Rename to ... * gnu/packages/patches/python-3-fix-tests.patch: ... this. Adjust and disable more tests. * gnu/packages/patches/python-3.5-getentropy-on-old-kernels.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python.scm (python-2.7)[argument]: Patch '/bin/sh' in one more file. (python-3.5): Rename to ... (python-3.6): ... this. Update to 3.6.3. [source](patches): Remove obsolete patch, adjust to patch rename. (python-3): Use PYTHON-3.6.
| * gnu: python@2: Update to 2.7.14.Marius Bakke2017-10-19
| | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-2.7): Update to 2.7.14. [source]: Add patch to skip two new tests. Delete upstreamed patch. * gnu/packages/patches/python-2.7-adjust-tests.patch: New file. * gnu/packages/patches/python-2.7-getentropy-on-old-kernels.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* | Merge branch 'master' into core-updatesTobias Geerinckx-Rice2017-10-25
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| * | gnu: expat: Update replacement to 2.2.4 [security fixes].Tobias Geerinckx-Rice2017-10-25
| | | | | | | | | | | | | | | | | | | | | | | | | | | See 'Changes' in the source distribution for more information about the fixed security issues. * gnu/packages/xml.scm (expat)[replacement]: Update to 2.2.4. (expat-2.2.2): Replace with... (expat-2.2.4): ...new variable.
| * | gnu: tor: Update to 0.3.1.8.Tobias Geerinckx-Rice2017-10-25
| | | | | | | | | | | | * gnu/packages/tor.scm (tor): Update to 0.3.1.8.
| * | gnu: sssd: Add missing word to description.Tobias Geerinckx-Rice2017-10-25
| | | | | | | | | | | | * gnu/packages/sssd.scm (sssd)[description]: Fix typo.
| * | gnu: sssd: Update to 1.16.0.Tobias Geerinckx-Rice2017-10-25
| | | | | | | | | | | | * gnu/packages/sssd.scm (sssd): Update to 1.16.0.
| * | gnu: ding-libs: Update to 0.6.1.Tobias Geerinckx-Rice2017-10-25
| | | | | | | | | | | | * gnu/packages/sssd.scm (ding-libs): Update to 0.6.1.
| * | gnu: r-ff: Remove aarch64-linux from supported-systems.Efraim Flashner2017-10-25
| | | | | | | | | | | | * gnu/packages/cran.scm (r-ff)[supported-systems]: New field.
| * | gnu: go@1.4: Limit supported systems.Efraim Flashner2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/golang.scm (go@1.4)[supported-systems]: New field, Limit supported systems to x86_64-linux, i686-linux and armhf-linux. (go@1.9)[supported-systems]: New field.
| * | gnu: perl-moox-file-configdir: Fix source URL.Ricardo Wurmus2017-10-25
| | | | | | | | | | | | | | | * gnu/packages/perl.scm (perl-moox-file-configdir)[source]: Fix typo in source URL.
| * | gnu: Add r-forcats.Kyle Meyer2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/statistics.scm (r-forcats): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add sqlite-with-fts3.Ricardo Wurmus2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/databases.scm (sqlite-with-fts3): New variable. Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
| * | gnu: Add crypto++.Pierre Langlois2017-10-25
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/crypto.scm (crypto++): New variable. * gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add libechonest.Pierre Langlois2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/music.scm (libechonest): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add qjson.Pierre Langlois2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/web.scm (qjson): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add parcimonie.Petter2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/gnupg.scm (parcimonie): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add perl-browser-open.Petter2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/perl.scm (perl-browser-open): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add perl-b-keywords.Petter2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/perl.scm (perl-b-keywords): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add perl-carp-always.Petter2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/perl.scm (perl-carp-always): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add perl-net-dbus-glib.Petter2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/glib.scm (perl-net-dbus-glib): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: Add perl-net-dbus.Petter2017-10-25
| | | | | | | | | | | | | | | | | | * gnu/packages/glib.scm (perl-net-dbus): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| * | gnu: dealii: Update to 8.5.1.Eric Bavier2017-10-24
| | | | | | | | | | | | | | | | | | Fixes compilation with boost@1.64.0. * gnu/packages/maths.scm (dealii): Update to 8.5.1.
| * | gnu: p4est: Update to 2.0.Eric Bavier2017-10-24
| | | | | | | | | | | | * gnu/packages/maths.scm (p4est): Update to 2.0.
| * | gnu: libhilbert: Remove package.Eric Bavier2017-10-24
| | | | | | | | | | | | | | | | | | | | | This package's source and webpage has disappeared for some time, and upstream projects (e.g. libmesh) seem to be bundling it, so we remove it for now. * gnu/packages/maths.scm (libhilbert): Remove variable.
| * | gnu: slepc: Update to 3.8.0.Eric Bavier2017-10-24
| | | | | | | | | | | | * gnu/packages/maths.scm (slepc): Update to 3.8.0.
| * | gnu: petsc: Update to 3.8.0.Eric Bavier2017-10-24
| | | | | | | | | | | | | | | * gnu/packages/maths.scm (petsc): Update to 3.8.0 [native-inputs]: Remove perl, which is no longer needed.
| * | gnu: bwa: Update to 0.7.17.Ben Woodcroft2017-10-25
| | | | | | | | | | | | * gnu/packages/bioinformatics.scm (bwa): Update to 0.7.17.
| * | gnu: bwa: Change source URL to GitHub.Ben Woodcroft2017-10-25
| | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (bwa)[source]: Change source URL to GitHub.
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