| Commit message (Collapse) | Author | Age |
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* gnu/packages/statistics.scm (r-purrr): Update to 0.3.4.
[native-inputs]: Add r-knitr.
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* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-8.
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* gnu/packages/statistics.scm (r-withr): Update to 2.2.0.
[native-inputs]: Add r-knitr.
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* gnu/packages/statistics.scm (r-xml2): Update to 1.3.2.
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* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.3.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Add r-knitr.
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* gnu/packages/statistics.scm (r-tibble): Update to 3.0.1.
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* gnu/packages/statistics.scm (r-foreign): Update to 0.8-78.
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* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.0.
(r-with-tests)[arguments]: Add phase "set-locales".
[native-inputs]: Add texlive-ae, texlive-inconsolata, and
texlive-latex-xkeyval to texlive-union.
[inputs]: Replace pcre with pcre2.
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* gnu/packages/astronomy.scm (stellarium): Update to 0.20.1.
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* gnu/packages/bioinformatics.scm (minimap2): Update to 2.17.
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* gnu/packages/wm.scm (sbcl-stumpwm-swm-gaps): New variable.
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* gnu/packages/compression.scm (tarsplitter)[description]: Fix typo.
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* gnu/packages/video.scm (wf-recorder): New variable.
Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
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This has ktsudo actually gain root access.
* gnu/packages/admin.scm (ktsuss)[arguments]: Instead of <sudo>/bin/{su,sudo}
file names, use the setuid' verrsions.
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* gnu/packages/wm.scm: herbstluftwm: Update to 0.8.1
Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
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* gnu/packages/radio.scm (fldigi): Update to 4.1.12.
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* gnu/packages/machine-learning.scm (python-scikit-rebate): New variable.
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* gnu/packages/bioinformatics.scm (python-deeptools): New variable.
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* gnu/packages/bioinformatics.scm (python-deeptoolsintervals): New variable.
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* gnu/packages/python-xyz.scm (python-bitarray): New variable.
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* gnu/packages/bioconductor.scm (r-cummerbund): New variable.
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* gnu/packages/cran.scm (r-inum): New variable.
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* gnu/packages/cran.scm (r-ggpmisc): New variable.
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* gnu/packages/bioconductor.scm (r-coverageview): New variable.
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* gnu/packages/video.scm (peek): New variable.
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* gnu/packages/emacs-xyz.scm (emacs-org-reveal)[description]: Fix Texinfo
syntax error.
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* gnu/packages/tex.scm (texlive-inconsolata): New variable.
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* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): New variable.
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* gnu/packages/bioconductor.scm (r-karyoploter): New variable.
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* gnu/packages/cran.scm (r-bezier): New variable.
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* gnu/packages/bioconductor.scm (r-ideoviz): New variable.
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* gnu/packages/cran.scm (r-ecp): New variable.
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* gnu/packages/cran.scm (r-reordercluster): New variable.
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* gnu/packages/linphone.scm (liblinphone)[outputs]: Add a "doc" and "tester"
outputs.
[phases]: Add a separate-outputs phase. Move the
glib-or-gtk-compile-schemas and glib-or-gtk-wrap phases after it.
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Libraries being linked to such as libxml2, libiconv and zlib should appear as
'inputs' rather than 'native-inputs'.
* gnu/packages/linphone.scm (liblinphone)[native-inputs]: Move libiconv,
libxml2 and zlib to...
[inputs]: ...here. Move eudev, python-pystache and python-six to
native-inputs.
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Icon themes and theme engines are best left for the users to select and
install themselves.
* gnu/packages/linphone.scm (liblinphone)[inputs]: Remove hicolor-icon-theme.
[propagated-inputs]: Remove murrine.
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* gnu/packages/vpn.scm (wireguard-linux-compat)[build-system]: Replace
'gnu-build-system' by 'linux-module-build-system'.
[outputs]: Add 'kernel-patch'.
[arguments]: Adjust the build system. Add phases 'change-directory' and
'reset-cwd'. Rename phases 'build' to 'build-patch' and 'install' to
'install-patch'.
[description]: Mention the loadable module.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/bioconductor.scm: Use two spaces after ending a sentence.
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* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): New
variable.
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* gnu/packages/xorg.scm (hackneyed-x11-cursors): New variable.
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* gnu/packages/bioconductor.scm (r-motifbreakr): New variable.
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* gnu/packages/bioconductor.scm (r-motifdb): New variable.
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* gnu/packages/bioconductor.scm (r-pasilla): New variable.
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This avoids having to packages, both called guile-chickadee.
* gnu/packages/game-development.scm (guile3.0-chickadee)[name]: Change from
guile-chickadee to guile3.0-chickadee.
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* gnu/packages/compression.scm (tarsplitter): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/video.scm (rav1e): New variable.
* gnu/packages/rust-apps.scm (rust-cbindgen-0.12, rust-cargo-c): New
variables.
* gnu/packages/crates-io.scm: Various new packages and upgrades.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.4.6.
[arguments]: Add another network based test to skip.
[propagated-inputs]: Add python-tqdm.
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* gnu/packages/python-web.scm (python-publicsuffix2): Provide explicit
destination in calls to FORMAT.
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* gnu/packages/nim.scm (nim)[arguments]: Provide explicit destination in calls
to FORMAT.
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* gnu/packages/linux.scm (tpacpi-bat)[arguments]: Provide explicit destination
in calls to FORMAT.
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