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* gnu: Add r-fit-models.Ricardo Wurmus2017-08-09
| | | | * gnu/packages/statistics.scm (r-fit-models): New variable.
* gnu: Add r-rrcov.Ricardo Wurmus2017-08-09
| | | | * gnu/packages/statistics.scm (r-rrcov): New variable.
* gnu: Add r-pcapp.Ricardo Wurmus2017-08-09
| | | | * gnu/packages/statistics.scm (r-pcapp): New variable.
* gnu: r-gdtools: Update to 0.1.5.Ricardo Wurmus2017-08-09
| | | | * gnu/packages/statistics.scm (r-gdtools): Update to 0.1.5.
* gnu: r-ggbeeswarm: Update to 0.6.0.Ricardo Wurmus2017-08-09
| | | | * gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.6.0.
* gnu: icecat: Add more fixes from upstream mozilla-esr52.Mark H Weaver2017-08-09
| | | | | | * gnu/packages/gnuzilla.scm (icecat)[source]: Add fixes for CVE-2017-7802, CVE-2017-7803, CVE-2017-7807, and the remaining 6 out of 23 changesets for CVE-2017-7779.
* gnu: icecat: Rename patches to reflect CVE assignments.Mark H Weaver2017-08-09
| | | | | | | | | | Document that our existing patches include fixes for CVE-2017-7753, CVE-2017-7784, CVE-2017-7786, CVE-2017-7787, CVE-2017-7791, CVE-2017-7792, CVE-2017-7798, CVE-2017-7798, CVE-2017-7800, CVE-2017-7801, and 17 out of 23 changesets for CVE-2017-7779. * gnu/packages/gnuzilla.scm (icecat)[source]: Rename patches to reflect CVE assignments.
* gnu: gnurl: Update to 7.55.0.ng02017-08-09
| | | | | | * gnu/packages/gnunet.scm (gnurl): Update to 7.55.0. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: virt-manager: Update to 1.4.2.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/virtualization.scm (virt-manager): Update to 1.4.2.
* gnu: libgdata: Disable failing tests.Tobias Geerinckx-Rice2017-08-09
| | | | | * gnu/packages/gnome.scm (libgdata)[arguments]: Add ‘disable-failing-tests’ phase.
* gnu: Add reference to (gnu packages graph).Ricardo Wurmus2017-08-09
| | | | This is a follow-up to 1738138cb3a48ed2f55c59c8d7c6ce12a4c4dcb3.
* gnu: r-igraph: Move to (gnu packages graph).Ricardo Wurmus2017-08-09
| | | | | * gnu/packages/statistics.scm (r-igraph): Move from here... * gnu/packages/graph.scm (r-igraph): ...to here.
* gnu: Add python-igraph.Ricardo Wurmus2017-08-09
| | | | * gnu/packages/graph.scm (python-igraph): New variable.
* gnu: Add igraph.Ricardo Wurmus2017-08-09
| | | | | * gnu/packages/graph.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: viewnior: Don't build icon-theme.cache.Efraim Flashner2017-08-09
| | | | | * gnu/packages/image-viewers.scm (viewnior)[arguments]: Add phase to disable building the icon-theme.cache.
* gnu: googletest: Build shared libraries.Manolis Ragkousis2017-08-09
| | | | | * gnu/packages/check.scm (googletest)[arguments]: Pass "-DBUILD_SHARED_LIBS=ON" in #:configure-flags.
* gnu: Add ois.Manolis Ragkousis2017-08-09
| | | | * gnu/packages/game-development.scm (ois): New variable.
* gnu: dealii: Update to 8.5.0.Eric Bavier2017-08-09
| | | | | | | * gnu/packages/maths.scm (dealii): Update to 8.5.0. [arguments]: Delete 'hint-example-prefix phase, which would need adjusting for this version. Users can use e.g. 'export DEAL_II_DIR=$GUIX_ENVIRONMENT'. Adjust configuration flags.
* gnu: stress-make: Patch default shell.Eric Bavier2017-08-09
| | | | | * gnu/packages/debug.scm (stress-make)[arguments]: Add 'set-default-shell phase.
* gnu: suitesparse: Update to 4.5.5.Eric Bavier2017-08-09
| | | | | | | | * gnu/packages/maths.scm (suitesparse): Update to 4.5.5. [source]: Add 'modules' and 'snippet' field to remove bundled source. [arguments]: Remove 'prepare-out' phase. Adjust #:make-flags for metis. Make build parallel, since it now appears to be safe. [inputs]: Add metis.
* gnu: suitesparse: Use modify-phases.Eric Bavier2017-08-09
| | | | * gnu/packages/maths.scm (suitesparse)[arguments]: Use modify-phases.
* gnu: petsc, slepc: Use 'parallel-job-count'.Eric Bavier2017-08-09
| | | | | | | * gnu/packages/maths.scm (petsc, slepc)[arguments]: Set #:make-flags to override default unlimited '-j'. (petsc)[arguments]: Scrub build machine cores from installed files in 'clean-local-references' phase.
* gnu: slepc: Update to 3.7.4.Eric Bavier2017-08-09
| | | | | * gnu/packages/maths.scm (slepc): Update to 3.7.4. [source]: Use direct source link. Remove 'file-name' field.
* gnu: petsc: Update to 3.7.6.Eric Bavier2017-08-09
| | | | * gnu/packages/maths.scm (petsc): Update to 3.7.6.
* gnu: epiphany: Update to 3.24.3.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (epiphany): Update to 3.24.3.
* gnu: tracker: Update to 1.12.2.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (tracker): Update to 1.12.2.
* gnu: gnome-online-accounts: Update to 3.24.2.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (gnome-online-accounts): Update to 3.24.2.
* gnu: mutter: Update to 3.24.4.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (mutter): Update to 3.24.4.
* gnu: gedit: Support gspell.Tobias Geerinckx-Rice2017-08-09
| | | | | * gnu/packages/gnome.scm (gedit)[arguments]: Remove #:configure-flags. [inputs]: Add gspell.
* gnu: gedit: Update to 3.22.1.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (gedit): Update to 3.22.1.
* gnu: gspell: Propagate enchant dependency.Tobias Geerinckx-Rice2017-08-09
| | | | | * gnu/packages/gnome.scm (gspell)[inputs]: Move enchant from here... [propagated-inputs]: ...to here.
* gnu: gspell: Order inputs alphabetically.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (gspell)[inputs, native-inputs]: Re-order.
* gnu: gnumeric: Update to 1.12.35.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (gnumeric): Update to 1.12.35.
* gnu: brasero: Update to 3.12.2.Tobias Geerinckx-Rice2017-08-09
| | | | * gnu/packages/gnome.scm (brasero): Update to 3.12.2.
* gnu: Use HTTPS for gnome.org and subdomains.Tobias Geerinckx-Rice2017-08-09
| | | | | | | | | | | * gnu/packages/fonts.scm (font-bitstream-vera)[home-page]: Use HTTPS. * gnu/packages/glib.scm (glib)[home-page]: Likewise. * gnu/packages/gnome.scm (gcr, libgnome-keyring, gnome-keyring, evince) (gnome-icon-theme, libgsf, gnome-mime-data, vala, vte, python2-rsvg) (glib-networking, gnome-settings-daemon, libchamplain, grilo, grilo-plugins) (gjs, zenity, mutter, network-manager, network-manager-applet, gdm) [home-page]: Likewise. * gnu/packages/gtk.scm (gtk-engines, murrine)[home-page]: Likewise.
* gnu: 0ad: Update to 0.0.22-alpha.Christopher Baines2017-08-08
| | | | * gnu/packages/games.scm (0ad-data, 0ad): Update to 0.0.22-alpha.
* gnu: babl: Update to 0.1.28.Efraim Flashner2017-08-08
| | | | * gnu/packages/gimp.scm (babl): Update to 0.1.28.
* gnu: gegl: Use 'modify-phases' syntax.Efraim Flashner2017-08-08
| | | | * gnu/packages/gimp.scm (gegl)[arguments]: Use the 'modify-phases' syntax.
* gnu: gegl: Fix building on aarch64.Efraim Flashner2017-08-08
| | | | * gnu/packages/gimp.scm (gegl)[arguments]: Add '-lm' configure-flag.
* gnu: ruby-activesupport: Update to 5.1.3.Ben Woodcroft2017-08-08
| | | | * gnu/packages/ruby.scm (ruby-activesupport): Update to 5.1.3.
* gnu: pciutils: Update to 3.5.5.Tobias Geerinckx-Rice2017-08-08
| | | | * gnu/packages/pciutils.scm (pciutils): Update to 3.5.5.
* gnu: hunspell: Update to 1.6.1.Tobias Geerinckx-Rice2017-08-08
| | | | | | * gnu/packages/libreoffice.scm (hunspell): Update to 1.6.1. [native-inputs]: Add autoconf, automake, and libtool. [arguments]: Add ‘bootstrap’ phase.
* gnu: hunspell: Update home page.Tobias Geerinckx-Rice2017-08-08
| | | | * gnu/packages/libreoffice.scm (hunspell)[home-page]: Update it.
* gnu: aspell-dict-en: Update to 2017.01.22-0.Tobias Geerinckx-Rice2017-08-08
| | | | | | Add missing copyright line for 2016. * gnu/packages/aspell.scm (aspell-dict-en): Update to 2017.01.22-0.
* gnu: moreutils: Update to 0.61.Tobias Geerinckx-Rice2017-08-08
| | | | * gnu/packages/moreutils.scm (moreutils): Update to 0.61.
* gnu: sudo: Use ‘modify-phases’ syntax.Tobias Geerinckx-Rice2017-08-08
| | | | * gnu/packages/admin.scm (sudo)[arguments]: Use ‘modify-phases’.
* gnu: linux-libre: Update to 4.12.5.Mark H Weaver2017-08-07
| | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.5. (%linux-libre-hash): Update hash.
* gnu: linux-libre@4.9: Update to 4.9.41.Mark H Weaver2017-08-07
| | | | * gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.41.
* gnu: linux-libre@4.4: Update to 4.4.80.Mark H Weaver2017-08-07
| | | | * gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.80.
* gnu: linux-libre@4.1: Update to 4.1.43.Mark H Weaver2017-08-07
| | | | * gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.43.
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