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* gnu: python-pandas: Move to (gnu packages python-science).Ricardo Wurmus2019-12-04
| | | | | | | | | * gnu/packages/python-xyz.scm (python-pandas, python2-pandas): Move from here... * gnu/packages/python-science.scm (python-pandas, python2-pandas): ...to here. * gnu/packages/benchmark.scm, gnu/packages/databases.scm, gnu/packages/graph.scm, gnu/packages/parallel.scm, gnu/packages/serialization.scm: Import (gnu packages python-science).
* gnu: parallel: Update to 20191122.Tobias Geerinckx-Rice2019-11-23
| | | | * gnu/packages/parallel.scm (parallel): Update to 20191122.
* gnu: slurm: Allow builds on 32-bit platforms.Ludovic Courtès2019-11-17
| | | | | | | | | | Fixes a regression introduced in 7c96befa52ba127f68a066162258e600afbc73fb whereby ./configure would fail on 32-bit platforms due to 32-bit support being "deprecated". * gnu/packages/parallel.scm (slurm)[arguments]: Pass "--enable-deprecated" configure flag unless 'target-64bit?' returns true.
* gnu: openmpi, slurm: Switch to hwloc 2.x.Ludovic Courtès2019-11-15
| | | | | * gnu/packages/mpi.scm (openmpi)[inputs]: Switch to HWLOC-2. * gnu/packages/parallel.scm (slurm)[inputs]: Likewise.
* gnu: slurm: Build shared libraries only.Ludovic Courtès2019-11-15
| | | | * gnu/packages/parallel.scm (slurm)[arguments]: Pass "--disable-static".
* gnu: slurm: Update to 19.05.3-2.Ludovic Courtès2019-11-15
| | | | | | | | * gnu/packages/parallel.scm (slurm): Update to 19.05.3-2. [source](snippet): Keep "contribs/mpi" and its reference in 'Makefile.am'. [inputs]: Remove OPENSSL. [arguments]: Remove "--with-ssl". Add 'install-libpmi' phase.
* gnu: parallel: Update to 20191022.Tobias Geerinckx-Rice2019-10-22
| | | | * gnu/packages/parallel.scm (parallel): Update to 20191022.
* gnu: parallel: Update to 20190922.Tobias Geerinckx-Rice2019-09-22
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190922.
* gnu: parallel: Update to 20190822.Tobias Geerinckx-Rice2019-08-23
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190822.
* gnu: Add python-slurm-magic.Ludovic Courtès2019-06-18
| | | | * gnu/packages/parallel.scm (python-slurm-magic): New variable.
* gnu: parallel: Update to 20190522.Tobias Geerinckx-Rice2019-05-23
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190522.
* gnu: parallel: Update to 20190422.Tobias Geerinckx-Rice2019-04-22
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190422.
* gnu: slurm: Configure with a "standard" syslogdir.Ludovic Courtès2019-04-16
| | | | | | | | | | Until now, we were using syslogdir=$prefix/etc, which did not exist. Thus, commands would always fail like this: $ guix environment --ad-hoc slurm --pure -- squeue -u $USER squeue: error: s_p_parse_file: unable to status file /gnu/store/…-slurm-17.11.3/etc/slurm.conf: No such file or directory, retrying in 1sec up to 60sec * gnu/packages/parallel.scm (slurm)[arguments]: Pass --sysconfdir.
* gnu: parallel: Update to 20190322.Tobias Geerinckx-Rice2019-03-22
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190322.
* gnu: parallel: Update to 20190222.Tobias Geerinckx-Rice2019-02-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190222.
* gnu: parallel: Update to 20190122.Tobias Geerinckx-Rice2019-02-12
| | | | * gnu/packages/parallel.scm (parallel): Update to 20190122.
* gnu: parallel: Update to 20181222.Rutger Helling2018-12-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20181222.
* gnu: parallel: Update to 20181122.Efraim Flashner2018-11-28
| | | | * gnu/packages/parallel.scm (parallel): Update to 20181122.
* gnu: parallel: Update to 20181022.Tobias Geerinckx-Rice2018-10-27
| | | | * gnu/packages/parallel.scm (parallel): Update to 20181022.
* gnu: parallel: Update to 20180922.Tobias Geerinckx-Rice2018-09-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180922.
* gnu: parallel: Update to 20180822.Ludovic Courtès2018-08-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180822.
* gnu: parallel: Update to 20180722.Efraim Flashner2018-07-30
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180722.
* gnu: parallel: Remove 'bash' input.Clément Lassieur2018-06-22
| | | | | | Because it's implicit. * gnu/packages/parallel.scm (parallel)[inputs]: Remove 'bash'.
* gnu: parallel: Wrap program instead of substituting 'ps' and 'perl'.Clément Lassieur2018-06-22
| | | | | | | * gnu/packages/parallel.scm (parallel)[arguments]: Replace 'ps' and 'perl' substitutions with a 'wrap-program' phase. Move the 'post-install-test' phase after it. [inputs]: Add bash.
* gnu: parallel: Update to 20180622.Clément Lassieur2018-06-21
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180622.
* gnu: parallel: Update to 20180522.Tobias Geerinckx-Rice2018-05-23
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180522.
* gnu: parallel: Update to 20180422.Rutger Helling2018-04-25
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180422.
* gnu: parallel: Update to 20180322.Tobias Geerinckx-Rice2018-03-23
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180322.
* gnu: slurm: Update to 17.11.3.Tobias Geerinckx-Rice2018-03-08
| | | | * gnu/packages/parallel.scm (slurm): Update to 17.11.3.
* gnu: parallel: Update to 20180222.Tobias Geerinckx-Rice2018-02-23
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180222.
* gnu: parallel: Update source hash.Tobias Geerinckx-Rice2018-01-23
| | | | | | | The upstream tarball changed almost immediately after release. See https://lists.gnu.org/archive/html/guix-devel/2018-01/msg00319.html. * gnu/packages/parallel.scm (parallel)[source]: Update hash.
* gnu: parallel: Don't end phase with #<undefined>.Tobias Geerinckx-Rice2018-01-22
| | | | * gnu/packages/parallel.scm (parallel)[arguments]: Use INVOKE.
* gnu: parallel: Update to 20180122.Tobias Geerinckx-Rice2018-01-22
| | | | * gnu/packages/parallel.scm (parallel): Update to 20180122.
* gnu: slurm: Add detailed licence information.Tobias Geerinckx-Rice2018-01-18
| | | | * gnu/packages/parallel.scm (slurm)[license]: Add more licences.
* gnu: slurm: Use HTTPS for home page.Tobias Geerinckx-Rice2018-01-18
| | | | * gnu/packages/parallel.scm (slurm)[home-page]: Use HTTPS.
* gnu: slurm: Update to 17.11.2.Tobias Geerinckx-Rice2018-01-18
| | | | | | | | | * gnu/packages/parallel.scm (slurm): Update to 17.11.2. [source]: Replace patch with less fragile SUBSTITUTE* in a snippet. [arguments]: Rename ‘autogen’ phase to ‘autoconf’. Use INVOKE. * gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: parallel: Update to 20171222.Rutger Helling2017-12-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20171222.
* gnu: parallel: Update to 20171122.Rutger Helling2017-11-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20171122.
* gnu: slurm: Update to 16.05.11 [fixes CVE-2017-15566].Leo Famulari2017-11-08
| | | | | * gnu/packages/parallel.scm (slurm): Update to 16.05.11. [source]: Use the recommended download URL.
* gnu: parallel: Update to 20171022.Efraim Flashner2017-10-25
| | | | * gnu/packages/parallel.scm (parallel): Update to 20171022.
* gnu: parallel: Update to 20170922.Efraim Flashner2017-09-24
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170922.
* gnu: Put autoconf-related phases immediately after the 'unpack phase.Kei Kebreau2017-09-04
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/audio.scm (audacity, rtmidi)[arguments]: Correct phases accordingly. * gnu/packages/bioinformatics.scm (mash, seek, vsearch, emboss, htslib-for-sambamba)[arguments]: Likewise. * gnu/packages/ci.scm (cuirass)[arguments]: Likewise. * gnu/packages/compression.scm (minizip, xdelta)[arguments]: Likewise. * gnu/packages/cpp.scm (libzen)[arguments]: Likewise. * gnu/packages/crypto.scm (opendht)[arguments]: Likewise. * gnu/packages/databases.scm (4store, mdbtools)[arguments]: Likewise. * gnu/packages/debug.scm (stress-make)[arguments]: Likewise. * gnu/packages/dns.scm (dnscrypt-proxy, dnscrypt-wrapper)[arguments]: Likewise. * gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Likewise. * gnu/packages/embedded.scm (libjaylink, openocd)[arguments]: Likewise. * gnu/packages/engineering.scm (gerbv)[arguments]: Likewise. * gnu/packages/erlang.scm (erlang)[arguments]: Likewise. * gnu/packages/ftp.scm (weex)[arguments]: Likewise. * gnu/packages/gnome.scm (dia)[arguments]: Likewise. * gnu/packages/gnunet.scm (gnurl, guile-gnunet)[arguments]: Likewise. * gnu/packages/gtk.scm (guile-rsvg, graphene)[arguments]: Likewise. * gnu/packages/guile.scm (guildhall, guile-ics, guile-sqlite3)[arguments]: Likewise. * gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Likewise. * gnu/packages/irc.scm (weechat)[arguments]: Likewise. * gnu/packages/java.scm (classpath-devel)[arguments]: Likewise. * gnu/packages/libreoffice.scm (libetonyek)[arguments]: Likewise. * gnu/packages/libusb.scm (hidapi)[arguments]: Likewise. * gnu/packages/linux.scm (gpm)[arguments]: Likewise. * gnu/packages/logging.scm (glog)[arguments]: Likewise. * gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise. * gnu/packages/mail.scm (dovecot-trees, dovecot-libsodium-plugin, esmtp) [arguments]: Likewise. * gnu/packages/messaging.scm (freetalk, libmesode, libstrophe)[arguments]: Likewise. * gnu/packages/microcom.scm (microcom)[arguments]: Likewise. * gnu/packages/ocaml.scm (ocaml-ssl)[arguments]: Likewise. * gnu/packages/parallel.scm (slurm)[arguments]: Likewise. * gnu/packages/pdf.scm (libharu)[arguments]: Likewise. * gnu/packages/samba.scm (cifs-utils)[arguments]: Likewise. * gnu/packages/serialization.scm (msgpack)[arguments]: Likewise. * gnu/packages/shells.scm (scsh)[arguments]: Likewise. * gnu/packages/telephony.scm (libiax2)[arguments]: Likewise. * gnu/packages/textutils.scm (dotconf)[arguments]: Likewise. * gnu/packages/version-control.scm (findnewest)[arguments]: Likewise. * gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Likewise.
* gnu: parallel: Update to 20170822.Efraim Flashner2017-08-25
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170822.
* gnu: parallel: Update to 20170722.Tobias Geerinckx-Rice2017-07-22
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170722.
* gnu: hwloc: Add "lib" and "debug" outputs.Ludovic Courtès2017-06-30
| | | | | | | * gnu/packages/mpi.scm (hwloc)[outputs]: New field. [arguments]: Add 'avoid-circular-references' phase. (openmpi)[inputs]: Use the "lib" output of HWLOC. * gnu/packages/parallel.scm (slurm)[inputs]: Likewise.
* gnu: parallel: Update to 20170522.Marius Bakke2017-05-28
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170522.
* gnu: parallel: Update to 20170422.Ludovic Courtès2017-05-02
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170422.
* gnu: parallel: Update to 20170322.Tobias Geerinckx-Rice2017-03-31
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170322.
* gnu: slurm: Update to 16.05.9.1.Carolili2017-02-11
| | | | | | | | * gnu/packages/parallel.scm (slurm): Update to 16.05.9.1. * gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch: Removing two contribs which are added in the new version. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: parallel: Update to 20170122.Ludovic Courtès2017-01-31
| | | | * gnu/packages/parallel.scm (parallel): Update to 20170122.
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