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* gnu: z3: Build the Python bindingsJakub Kądziołka2020-02-23
| | | | | | * gnu/packages/maths.scm (z3)[arguments]: Add the --python and --pypkgdir flags to configure. To facilitate the latter, add (guix build python-build-system) to #:modules and #:imported-modules.
* gnu: Add vinci.Andreas Enge2020-02-21
| | | | * gnu/packages/maths.scm (vinci): New variable.
* gnu: octave, octave-cli: Update to 5.2.0.Kei Kebreau2020-02-10
| | | | | * gnu/packages/maths.scm (octave, octave-cli): Update to 5.2.0. [inputs]: Add bdb.
* gnu: superlu-dist: Update to 6.2.0.Eric Bavier2020-01-31
| | | | | | | * gnu/packages/maths.scm (superlu-dist): Update to 6.2.0. [source]: Update upstream url. Remove mpi deprecations patch. * gnu/packages/patches/superlu-dist-fix-mpi-deprecations.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: superlu: Update upstream url.Eric Bavier2020-01-31
| | | | * gnu/packages/maths.scm (superlu)[source,home-page]: Update url.
* gnu: wxmaxima: Update to 20.01.3.base-for-series-2712Kei Kebreau2020-01-23
| | | | | * gnu/packages/maths.scm (wxmaxima): Update to 20.01.3. [home-page]: Update URL.
* gnu: elemental: Update home page.Tobias Geerinckx-Rice2020-01-19
| | | | | * gnu/packages/maths.scm (elemental)[home-page]: Use repository home page.
* gnu: petsc: Use HTTPS home page.Tobias Geerinckx-Rice2020-01-19
| | | | * gnu/packages/maths.scm (petsc)[home-page, license]: Use HTTPS.
* gnu: Use HTTPS for www.hdfgroup.org.Tobias Geerinckx-Rice2020-01-17
| | | | | * gnu/packages/maths.scm (hdf5)[home-page, license]: Use HTTPS. (hdf-java, h5check)[source]: Likewise.
* gnu: netcdf: Use HTTPS home page.Tobias Geerinckx-Rice2020-01-17
| | | | * gnu/packages/maths.scm (netcdf)[home-page]: Use HTTPS.
* gnu: scotch: Use HTTPS home page.Tobias Geerinckx-Rice2020-01-17
| | | | * gnu/packages/maths.scm (scotch)[home-page]: Use HTTPS.
* Update email address for Amin Bandali.Amin Bandali2020-01-17
| | | | | | | | | * .mailmap: Add name and email addresses for Amin Bandali. * gnu/local.mk, gnu/packages/emacs-xyz.scm, gnu/packages/emacs.scm, gnu/packages/fpga.scm, gnu/packages/lean.scm, gnu/packages/maths.scm: Update email address for Amin Bandali. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: python-slepc4py: Update to 3.11.0.Paul Garlick2020-01-14
| | | | * gnu/packages/maths.scm (python-slepc4py): Update to 3.11.0.
* gnu: python-petsc4py: Update to 3.11.0.Paul Garlick2020-01-14
| | | | * gnu/packages/maths.scm (python-petsc4py): Update to 3.11.0.
* gnu: hdf5@1.10: Update to 1.10.6.Tobias Geerinckx-Rice2020-01-10
| | | | * gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.6.
* gnu: lapack: Update to 3.9.0.Konrad Hinsen2020-01-07
| | | | | | * gnu/packages/maths.scm (lapack): Update to 3.9.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: hdf5@1.10: Update to 1.10.5.Ludovic Courtès2019-12-13
| | | | | | | * gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.5. Remove "hdf5-mpi-deprecations.patch". * gnu/packages/patches/hdf5-mpi-deprecations.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: Add lrslib.Andreas Enge2019-12-06
| | | | * gnu/packages/maths.scm (lrslib): New variable.
* Merge branch 'staging'Marius Bakke2019-12-04
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| * Merge branch 'master' into stagingMarius Bakke2019-11-28
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| * \ Merge branch 'master' into stagingMarius Bakke2019-11-21
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| * \ \ Merge branch 'master' into stagingMarius Bakke2019-10-21
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| * \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-18
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| * \ \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-13
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| * | | | | | gnu: OpenBLAS: Update to 0.3.7.Marius Bakke2019-10-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (openblas): Update to 0.3.7.
| * | | | | | gnu: OpenBLAS: Incorporate grafted changes.Marius Bakke2019-10-08
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (openblas)[replacement]: Remove. [arguments]: Add NUM_THREADS in #:make-flags. (openblas/fixed-num-threads): Remove variable.
* | | | | | | gnu: z3: Update to 4.8.7.Tobias Geerinckx-Rice2019-12-01
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (z3): Update to 4.8.7.
* | | | | | | gnu: nauty: Update to 2.6r12.Tobias Geerinckx-Rice2019-12-01
| |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (nauty): Update to 2.6r12.
* | | | | | gnu: Remove obsolete import of R build system module.Ricardo Wurmus2019-11-27
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm: Remove import of (guix build-system r).
* | | | | | gnu: r-subplex: Move to (gnu packages cran).zimoun2019-11-27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (r-subplex): Move from here... * gnu/packages/cran.scm (r-subplex): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* | | | | | gnu: r-pracma: Move to (gnu packages cran).zimoun2019-11-27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (r-pracma): Move from here... * gnu/packages/cran.scm (r-pracma): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* | | | | | gnu: r-desolve: Move to (gnu packages cran).zimoun2019-11-27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (r-desolve): Move from here... * gnu/packages/cran.scm (r-desolve): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* | | | | | gnu: r-quadprog: Move to (gnu packages cran).zimoun2019-11-27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (r-quadprog): Move from here... * gnu/packages/cran.scm (r-quadprog): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* | | | | | gnu: wxmaxima: Update to 19.11.1.Kei Kebreau2019-11-23
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (wxmaxima): Update to 19.11.1.
* | | | | | gnu: r-quadprog: Update to 1.5-8.Tobias Geerinckx-Rice2019-11-23
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (r-quadprog): Update to 1.5-8.
* | | | | | gnu: r-desolve: Update to 1.25.Tobias Geerinckx-Rice2019-11-23
| |_|_|_|/ |/| | | | | | | | | | | | | | * gnu/packages/maths.scm (r-desolve): Update to 1.25.
* | | | | gnu: Add minisat.Robert Smith2019-11-19
| |_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/minisat-friend-declaration.patch: New file. * gnu/packages/patches/minisat-install.patch: New file. * gnu/local.mk (dist_patch_DATA): Add both files above. * gnu/packages/maths.scm (minisat): New exported variable. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
* | | | gnu: vc: Update to 1.4.1.Marius Bakke2019-10-20
| |_|/ |/| | | | | | | | | | | | | | * gnu/packages/maths.scm (vc): Update to 1.4.1. [native-inputs]: Add VIRTEST and a test data origin. [arguments]: Add phase to copy test data.
* | | gnu: mumps: Build and install shared libraries.Maurice Brémond2019-10-14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/mumps-shared-libseq.patch, gnu/packages/patches/mumps-shared-mumps.patch, gnu/packages/patches/mumps-shared-pord.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/maths.scm (mumps)[source](patches): Add them. [arguments]: In 'configure' phase, adjust "Makefile.inc" for shared library support. In 'install' phase, install libmpiseq.so when it exists. Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
* | | gnu: mumps: Update to 5.2.1.Maurice Brémond2019-10-14
| |/ |/| | | | | | | | | * gnu/packages/maths.scm (mumps): Update to 5.2.1. Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
* | gnu: mcrl2: Update source url.Jan Nieuwenhuizen2019-10-08
|/ | | | * gnu/packages/maths.scm (mcrl2): Update source url.
* Merge branch 'core-updates'Ludovic Courtès2019-10-08
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| * Merge branch 'master' into core-updatesLudovic Courtès2019-10-01
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| * \ Merge branch 'master' into core-updatesMarius Bakke2019-09-27
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| * \ \ Merge branch 'master' into core-updatesLudovic Courtès2019-09-24
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| * \ \ \ Merge branch 'master' into core-updatesLudovic Courtès2019-09-17
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| * \ \ \ \ Merge branch 'master' into core-updatesMark H Weaver2019-09-06
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| * | | | | | gnu: hdf-eos2: Add libtirpc input.Marius Bakke2019-09-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/maths.scm (hdf-eos2)[inputs]: Add LIBTIRPC.
| * | | | | | gnu: hdf4: Build with libtirpc.Marius Bakke2019-09-03
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/hdf4-tirpc.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/maths.scm (hdf4)[source](patches): Use it. [inputs]: Add LIBTIRPC. [arguments]: Adjust #:configure-flags accordingly.
| * | | | | | Merge branch 'master' into core-updatesMark H Weaver2019-08-29
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