| Commit message (Collapse) | Author | Age |
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* gnu/packages/maths.scm (make-blis): New procedure.
(blis, ignorance): New variables.
(blis/x86_64): New macro.
(blis-sandybridge, blis-haswell, blis-knl): New variables.
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*gnu/packages/maths.scm (pt-scotch32) [arguments]: substitute keyword
arguments from "scotch32" package, ensuring that the INTSIZE32 macro is
set
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (netcdf) [arguments]: Add phase to fix the embedded
'Configured On' date; truncate reference to compiler store item.
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* gnu/packages/maths.scm (hdf4) [arguments]: Add phase 'patch-settings to
truncate hashes of compiler store items.
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* gnu/packages/maths.scm (hdf5) [arguments]: Add phase to patch
"libhdf5.settings", removing references to the C/C++/Fortran compilers.
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* gnu/packages/maths.scm (hdf5) [native-inputs]: Add gfortran.
[outputs]: Add "fortran".
[arguments]: Enable Fortran compilation; add "/lib" directory of the fortran
output to the runpath of the Fortran libs; add a 'split phase to move
all Fortran-related files to the the Fortran output store location.
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* gnu/packages/maths.scm (pt-scotch32): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (scotch32): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (coda): Update to 2.18.2.
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* .mailmap: Map kei@openmailbox.org to current address.
* gnu/local.mk: Replace kei@openmailbox.org to current address.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/calendar.scm: Likewise.
* gnu/packages/check.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/fltk.scm: Likewise.
* gnu/packages/freedesktop.scm: Likewise.
* gnu/packages/game-development.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gnustep.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/hexedit.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/xfce.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/textutils.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/web-browsers.scm: Likewise.
* gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
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This merge commit includes a fix for CVE-2017-6512 in Perl 5.26.0.
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* gnu/packages/flex.scm (flex-2.6.1): Remove variable.
* gnu/packages/bootloaders.scm (grub, dtc): Use flex instead of flex-2.6.1.
* gnu/packages/embedded.scm (propeller-binutils, binutils-vc4): Likewise.
* gnu/packages/maths.scm (scotch): Likewise.
* gnu/packages/wine.scm (wine): Likewise.
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* gnu/packages/maths.scm (z3): Add python bindings.
[build-system]: Change to cmake-build-system.
[arguments]: Remove "changedir" phase. Add "bootstrap" and
"make-test-z3" phases; replace the "check" phase.
Add #:configure-flags. Remove #:test-target.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (hdf4)[arguments]: Add a phase to improve
detection and support for aarch64-linux.
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* gnu/packages/maths.scm (wxmaxima): Update to 17.05.1.
[arguments]: Put "autoconf" phase after the "unpack" phase. Fix
indentation.
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* gnu/packages/maths.scm (dealii): Update to 8.5.0.
[arguments]: Delete 'hint-example-prefix phase, which would need adjusting for
this version. Users can use e.g. 'export DEAL_II_DIR=$GUIX_ENVIRONMENT'.
Adjust configuration flags.
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* gnu/packages/maths.scm (suitesparse): Update to 4.5.5.
[source]: Add 'modules' and 'snippet' field to remove bundled source.
[arguments]: Remove 'prepare-out' phase. Adjust #:make-flags for metis.
Make build parallel, since it now appears to be safe.
[inputs]: Add metis.
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* gnu/packages/maths.scm (suitesparse)[arguments]: Use modify-phases.
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* gnu/packages/maths.scm (petsc, slepc)[arguments]: Set #:make-flags to
override default unlimited '-j'.
(petsc)[arguments]: Scrub build machine cores from installed files in
'clean-local-references' phase.
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* gnu/packages/maths.scm (slepc): Update to 3.7.4.
[source]: Use direct source link. Remove 'file-name' field.
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* gnu/packages/maths.scm (petsc): Update to 3.7.6.
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* gnu/packages/maths.scm (cubicle)[native-inputs]: Retrieve WHICH from
(gnu packages base).
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* gnu/packages/maths.scm (cubicle): New variable.
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* gnu/packages/maths.scm (r-pracma): Update to 2.0.7.
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* gnu/packages/maths.scm (vc)[supported-systems]: New field.
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* gnu/packages/maths.scm (hdf4): Update to 4.12.13.
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* gnu/packages/maths.scm (z3): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (glpk): Update to 4.63.
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* gnu/packages/maths.scm (maxima)[arguments]: Use modify-phases syntax.
Modify 'post-install' phase.
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This reverts commit f2fa86cc82b5941bde63b666337eea59aa609e55.
Commit 5ea8dbf0c906d51779ba0cf775ec9967f5f42382 fixes the underlying
issue in GNU Common Lisp.
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Apparently the release was modified (cleaned-up) in-place. An issue was opened
at https://github.com/Reference-LAPACK/lapack-release/issues/4.
* gnu/packages/maths.scm (lapack): Fix sha256 hash.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* gnu/packages/maths.scm (wxmaxima): Update to 17.05.0.
[source]: Update URL and add file-name.
[native-inputs]: Add autoconf, automake and gettext-minimal.
[arguments]: Add 'autoconf' phase.
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* gnu/packages/maths.scm (maxima)[inputs]: Add gcc.
[arguments]: Use modify-phases syntax. Add 'set-gcc-path' phase.
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* gnu/packages/maths.scm (itpp)[native-inputs]: Replace texlive-minimal with
texlive-tiny; add ghostscript.
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* gnu/packages/maths.scm (gnuplot)[native-inputs]: Replace texlive-minimal
with texlive-tiny.
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This fixes a regression introduced in
ef39a17717a10a7f406730258acfdb07934c7255, which would break
python-scipy ("undefined reference to `zungqr_'").
* gnu/packages/maths.scm (lapack)[arguments]: Add
"-DCMAKE_INSTALL_LIBDIR" to #:configure-flags.
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