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* gnu: julia: Upgrade to 1.3.1.Nicolò Balzarotti2020-04-07
| | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/julia.scm (libuv-julia): Upgrade to 2.0.0-1.35b1504. (libunwind-julia): New variable. (llvm-patch): Rename to ... (julia-patch): ... this. Update to 1.3.1. (llvm-julia): Adjust patch-set based on above change. Adjust indent. (julia): Update to 1.3.1. [source]: Add patch. [arguments]: Adjust custom 'prepare-deps (llvm-patch): Rename to ... (julia-patch): ... this. Update to 1.3.1. (llvm-julia): Adjust patch-set based on above change. (julia): Upgrade to 1.3.1. [arguments]: Adjust custom 'prepare-deps phase based on changed inputs. Remove most of 'hardcode-soname-map. Adjust 'fix-include-and-link-paths. Add new 'fix-precompile phase. Adjust custom 'disable-broken-tests phase. Add new 'make-wrapper phase. Adjust make-flags. [inputs]: Add p7zip, mbedtls-apache, curl libssh2. Remove openspecfun, fftw, fftwf, python2-virtualenv, rmath. Replace libunwind with libunwind-julia, custom suitesparse with system suitesparse, custom dsfmt with system dsfmt. [native-search-paths]: Add JULIA_DEPOT_PATH. * gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: julia.scm: Fix indentaion.Efraim Flashner2020-04-07
| | | | * gnu/packages/julia.scm: Re-indent file.
* gnu: julia: Set search path.nixo2019-09-04
| | | | | | | * gnu/packages/julia.scm (julia)[native-search-paths]: Add specification for JULIA_LOAD_PATH. Signed-off-by: Julien Lepiller <julien@lepiller.eu>
* gnu: julia: Update to 1.1.1.Nicolò Balzarotti2019-07-24
| | | | | | | | | | | | | | | | | | | * gnu/packages/julia.scm (libuv-julia): Update to commit 26dbe56. (libunwind-for-julia): Remove. (llvm-patch-url, llvm-patch): New procedures. (llvm-julia): New variable. (julia): Update to 1.1.1. [arguments]: Adjust 'prepare-deps' to new set of dependencies. Adjust 'hardcode-soname-map': remove openlibm and libfftw handling. Update file names in 'fix-include-and-link-paths' and 'hardcode-paths'. Adjust 'disable-broken-tests'. Pass PREFIX, LIBFLAS, and LIBBLASNAME in #:make-flags; update other flags. [inputs]: Replace LLVM-3.9.1 with LLVM-JULIA. Replace LIBUNWIND-FOR-JULIA with LIBUNWIND. Add "rmath" and "libwhich". [native-inputs]: Remove "unicode-data". Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* Remove traces of "GuixSD".Ludovic Courtès2019-03-13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/bootloader/extlinux.scm (extlinux-configuration-file): Remove mentions of "GuixSD". * gnu/bootloader/grub.scm (install-grub-efi): Likewise. * gnu/build/vm.scm (make-iso9660-image): Change default #:volume-id to "Guix_image". (initialize-hard-disk): Search for the "Guix_image" label. * gnu/ci.scm (system-test-jobs, tarball-jobs): Remove "GuixSD". * gnu/installer/newt/welcome.scm (run-welcome-page): Likewise. * gnu/packages/audio.scm (supercollider)[description]: Likewise. * gnu/packages/curl.scm (curl): Likewise. * gnu/packages/emacs.scm (emacs): Likewise. * gnu/packages/gnome.scm (network-manager): Likewise. * gnu/packages/julia.scm (julia): Likewise. * gnu/packages/linux.scm (alsa-plugins): Likewise. (powertop, wireless-regdb): Likewise. * gnu/packages/package-management.scm (guix): Likewise. * gnu/packages/polkit.scm (polkit): Likewise. * gnu/packages/tex.scm (texlive-bin): Likewise. * gnu/services/base.scm (file-systems->fstab): Likewise. * gnu/services/cups.scm (%cups-activation): Likewise. * gnu/services/mail.scm (%dovecot-activation): Likewise. * gnu/services/messaging.scm (prosody-configuration)[log]: Likewise. * gnu/system/examples/vm-image.tmpl (vm-image-motd): Likewise. * gnu/system/install.scm (installation-os)[file-systems]: Change root file system label to "Guix_image". * gnu/system/mapped-devices.scm (check-device-initrd-modules): Remove "GuixSD". * gnu/system/vm.scm (system-docker-image): Likewise. (system-disk-image)[root-label]: Change to "Guix_image". * gnu/tests/install.scm (run-install): Remove "GuixSD". * guix/modules.scm (guix-module-name?): Likewise. * nix/libstore/optimise-store.cc: Likewise.
* gnu: Separate Python core packages from the rest.Ricardo Wurmus2019-01-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm: Move hundreds of package definitions from here... * gnu/packages/python-xyz.scm: ...to this new module. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/ada.scm, gnu/packages/admin.scm, gnu/packages/android.scm, gnu/packages/audio.scm, gnu/packages/backup.scm, gnu/packages/benchmark.scm, gnu/packages/bioinformatics.scm, gnu/packages/bittorrent.scm, gnu/packages/calendar.scm, gnu/packages/check.scm, gnu/packages/chemistry.scm, gnu/packages/cluster.scm, gnu/packages/compression.scm, gnu/packages/connman.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm, gnu/packages/databases.scm, gnu/packages/dav.scm, gnu/packages/direct-connect.scm, gnu/packages/disk.scm, gnu/packages/django.scm, gnu/packages/dlang.scm, gnu/packages/docker.scm, gnu/packages/ebook.scm, gnu/packages/elf.scm, gnu/packages/emacs.scm, gnu/packages/emulators.scm, gnu/packages/engineering.scm, gnu/packages/enlightenment.scm, gnu/packages/finance.scm, gnu/packages/fltk.scm, gnu/packages/fontutils.scm, gnu/packages/freedesktop.scm, gnu/packages/game-development.scm, gnu/packages/games.scm, gnu/packages/geo.scm, gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm, gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm, gnu/packages/graph.scm, gnu/packages/graphics.scm, gnu/packages/graphviz.scm, gnu/packages/gtk.scm, gnu/packages/ham-radio.scm, gnu/packages/image-processing.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/julia.scm, gnu/packages/kde-frameworks.scm, gnu/packages/key-mon.scm, gnu/packages/libffi.scm, gnu/packages/libreoffice.scm, gnu/packages/libusb.scm, gnu/packages/lirc.scm, gnu/packages/logging.scm, gnu/packages/machine-learning.scm, gnu/packages/mail.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/medical.scm, gnu/packages/messaging.scm, gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/mpd.scm, gnu/packages/music.scm, gnu/packages/networking.scm, gnu/packages/nutrition.scm, gnu/packages/openldap.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/password-utils.scm, gnu/packages/patchutils.scm, gnu/packages/pdf.scm, gnu/packages/photo.scm, gnu/packages/polkit.scm, gnu/packages/protobuf.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/qt.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm, gnu/packages/search.scm, gnu/packages/selinux.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/simulation.scm, gnu/packages/ssh.scm, gnu/packages/statistics.scm, gnu/packages/storage.scm, gnu/packages/sync.scm, gnu/packages/terminals.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/virtualization.scm, gnu/packages/vpn.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm, gnu/packages/wicd.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm: Update module references.
* gnu: julia: Update objconv input to 2018-10-07.Tobias Geerinckx-Rice2018-11-01
| | | | * gnu/packages/julia.scm (julia)[input]: Update objconf to 2018-10-07.
* gnu: julia: Update objconv input.Marius Bakke2018-09-09
| | | | | * gnu/packages/julia.scm (julia)[inputs]: Update the hash of "objconv", which does not have a stable URL. Add a file name and use HTTPS while at it.
* gnu: julia: Fix 'llvm' version.Rouby Pierre-Antoine2018-07-19
| | | | | | | | | Fixes a build failure with LLVM 6.0.x. * gnu/packages/julia.scm (julia)[inputs]: Use LLVM-3.9.1 instead of LLVM. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Use HTTPS for julialang.org home pages.Tobias Geerinckx-Rice2018-04-29
| | | | | * gnu/packages/textutils.scm (utf8proc)[home-page]: Use HTTPS. * gnu/packages/julia.scm (julia)[home-page]: Likewise
* gnu: arpack-ng: Update to 3.5.0; use 3.3.0 for julia.Ludovic Courtès2018-03-12
| | | | | | | | | Partly fixes <https://bugs.gnu.org/30282>. * gnu/packages/maths.scm (arpack-ng): Update to 3.5.0. [native-inputs]: New field. (arpack-ng-3.3.0): New variable. * gnu/packages/julia.scm (julia)[inputs]: Use ARPACK-NG-3.3.0.
* gnu: julia: Don't invoke /sbin/ldconfig.Ludovic Courtès2018-02-06
| | | | | | | | Reported by Marco van Hulten <marco@hulten.org> in <https://bugs.gnu.org/30282>. * gnu/packages/julia.scm (julia)[arguments] <'hardcode-soname-map>: Patch out 'ldconfig' invocations.
* gnu: julia: Adjust libgit2 tests.Ludovic Courtès2018-02-06
| | | | | * gnu/packages/julia.scm (julia)[arguments] <'disable-broken-tests>: Patch libgit2.jl.
* gnu: julia: Add support for aarch64-linux.Efraim Flashner2017-07-05
| | | | | | * gnu/packages/julia.scm (julia)[arguments]: Add make-flag argument for aarch64-linux. [supported-systems]: Add aarch64-linux.
* gnu: julia: Update to 0.6.0.Ricardo Wurmus2017-06-22
| | | | | | | | | * gnu/packages/julia.scm (libuv-julia): Update to 1.9.0-5.52d72a52. (julia): Update to 0.6.0. [arguments]: Remove phase "fix-llvm-flag"; add phase "disable-documentation"; use threaded fftw variant in phase "hardcode-soname-map"; disable "file" tests in phase "disable-broken-tests"; add "USE_LLVM_SHLIB=0" to make flags. [native-inputs]: Add "unicode-data".
* gnu: julia: Update to 0.5.1.Ricardo Wurmus2017-04-14
| | | | * gnu/packages/julia.scm (julia): Update to 0.5.1.
* gnu: julia: Update to 0.5.0.Ricardo Wurmus2016-10-01
| | | | | | | | | | | | | | | | | | * gnu/packages/julia.scm (libuv-julia): Update to commit 8d5131b6c1595920dd30644cd1435b4f344b46c8. (libunwind-for-julia): New variable. (julia): Update to 0.5.0. [arguments]: Disable stripping of binaries; modify "prepare-deps" phase; add "fix-llvm-flag" phase; add "set-home" phase; adjust "hardcode-soname-map" phase; remove fix for "double-conversion" from "fix-include-and-link-paths" phase; enable "repl" and "replcompletions" tests; disable "backtrace", "compile", "replutil", and "cmdlineargs" tests; remove USE_SYSTEM_RMATH flag; remove USE_SYSTEM_GRISU flag. [inputs]: Replace "llvm-3.5" with "llvm"; replace "libunwind" with "libunwind-for-julia"; remove "double-conversion"; remove "rmath-julia"; update "suitesparse" origin; replace "virtualenv" origin with "python2-virtualenv". [native-inputs]: Add "openssl".
* gnu: julia: Build with zlib.Efraim Flashner2016-07-20
| | | | * gnu/packages/julia.scm (julia)[inputs]: Add zlib.
* gnu: julia: Use unbundled release tarball.Ricardo Wurmus2016-06-14
| | | | | | | | | * gnu/packages/julia.scm (julia)[source]: Use smaller tarball without bundled sources. [inputs]: Add inputs for rmath-julia, suitesparse, objconv, dsfmt, and virtualenv. [arguments]: Add phase "prepare-deps" to copy tarballs to their expected locations.
* gnu: julia: Update to 0.4.5.Ricardo Wurmus2016-05-31
| | | | | * gnu/packages/julia.scm (julia): Update to 0.4.5. (libuv-julia): Update commit.
* gnu: julia: Update to 0.4.3.Ricardo Wurmus2016-01-13
| | | | | * gnu/packages/julia.scm (julia): Update to 0.4.3. (libuv-julia): Update to 07730c4bd595.
* gnu: julia: Update to 0.4.2.Ricardo Wurmus2016-01-04
| | | | | | | | | | | | * gnu/packages/patches/julia-0.3.10-fix-empty-array.patch: Remove file. * gnu-system.am (dist_patch_DATA): Remove it. * gnu/packages/julia.scm (julia): Update to 0.4.2. [arguments]: Remove phase "fix-building-with-mcjit-llvm"; replace phase "patch-include-path" with "fix-include-and-link-paths"; add phase "hardcode-paths"; add missing make-flags. [inputs]: Replace "pcre" with "pcre2"; replace "git" with "libgit2"; add "coreutils"; add "libuv-julia"; add "wget"; add "which". [native-inputs]: Remove "which".
* gnu: Add libuv-julia.Ricardo Wurmus2016-01-04
| | | | * gnu/packages/julia.scm (libuv-julia): New variable.
* gnu: julia: Update to 0.3.10.Ricardo Wurmus2015-07-21
| | | | | | * gnu/packages/julia.scm (julia): Update to 0.3.10. * gnu/packages/patches/julia-0.3.10-fix-empty-array.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
* gnu: Replace versioned gfortran inputs with just "gfortran".Ricardo Wurmus2015-06-25
| | | | | | | | | | | | | | | * gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with "gfortran". * gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise. * gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu) (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise. (octave)[native-inputs]: Likewise. (gmsh)[propagated-inputs]: Likewise. * gnu/packages/mpi.scm (openmpi)[inputs]: Likewise. * gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise. * gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise. * gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with "gfortran".
* gnu: julia: Use modify-phases syntax and add return values.Ricardo Wurmus2015-06-24
| | | | | * gnu/packages/julia.scm (julia)[arguments]: Use modify-phases syntax for build phases and add missing return values.
* gnu: julia: Fix make-flags on non-Intel platforms.Mark H Weaver2015-04-22
| | | | * gnu/packages/julia.scm (julia)[arguments]: Add default case in 'match' form.
* gnu: Disable RUNPATH validation for packages that use $ORIGIN.Ludovic Courtès2015-04-14
| | | | | | * gnu/packages/haskell.scm (ghc)[arguments]: Add #:validate-runpath?. * gnu/packages/julia.scm (julia)[arguments]: Likewise. * gnu/packages/java.scm (icedtea6)[arguments]: Likewise.
* gnu: julia: Pass MARCH make flag.Ricardo Wurmus2015-04-08
| | | | | * gnu/packages/julia.scm (julia)[arguments]: Pass "MARCH" flag for supported architectures.
* gnu: julia: Mark as unsupported on ARM and MIPS.Ricardo Wurmus2015-04-08
| | | | * gnu/packages/julia.scm (julia): Add 'supported-systems' field.
* gnu: Add Julia.Ricardo Wurmus2015-03-23
* gnu/packages/julia.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it.
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