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| * gnu: r-qtl: Update to 1.41-6.Ricardo Wurmus2017-08-03
| * gnu: r-seqinr: Update to 3.4-5.Ricardo Wurmus2017-08-03
| * gnu: r-optparse: Update to 1.4.4.Ricardo Wurmus2017-08-03
| * gnu: r-bookdown: Update to 0.4.Ricardo Wurmus2017-08-03
| * gnu: htseq: Use PyPI URI.Ben Woodcroft2017-08-03
| * gnu: htseq: Update to 0.9.1.Ben Woodcroft2017-08-03
| * gnu: r-deseq2: Update to 1.16.1.Roel Janssen2017-08-02
| * gnu: r-annotationforge: Update to 1.18.1.Roel Janssen2017-08-02
| * gnu: r-category: Update to 2.42.1.Roel Janssen2017-08-02
| * gnu: r-biocstyle: Update to 2.4.1.Roel Janssen2017-08-02
| * gnu: r-dnacopy: Update to 1.50.1.Roel Janssen2017-08-02
| * gnu: r-iranges: Update to 2.10.2.Roel Janssen2017-08-02
| * gnu: r-genomeinfodb: Update to 1.12.2.Roel Janssen2017-08-02
| * gnu: r-variantannotation: Update to 1.22.3.Roel Janssen2017-08-02
| * gnu: r-limma: Update to 3.32.5.Roel Janssen2017-08-02
| * gnu: r-biobase: Update to 2.36.2.Roel Janssen2017-08-02
| * gnu: r-annotationdbi: Update to 1.38.2.Roel Janssen2017-08-02
| * gnu: r-biomart: Update to 2.32.1.Roel Janssen2017-08-02
| * gnu: r-biocparallel: Update to 1.10.1.Roel Janssen2017-08-02
| * gnu: r-biostrings: Update to 2.44.2.Roel Janssen2017-08-02
| * gnu: r-delayedarray: Update to 0.2.7.Roel Janssen2017-08-02
| * gnu: r-summarizedexperiment: Update to 1.6.3.Roel Janssen2017-08-02
| * gnu: r-genomicalignments: Update to 1.12.1.Roel Janssen2017-08-02
| * gnu: r-rtracklayer: Update to 1.36.4.Roel Janssen2017-08-02
| * gnu: r-genomicfeatures: Update to 1.28.4.Roel Janssen2017-08-02
| * gnu: r-copywriter: Update to 2.8.1.Roel Janssen2017-08-02
| * gnu: r-sva: Update to 3.24.4.Roel Janssen2017-08-02
* | gnu: perl: Work around more "dotless @INC" build issues.Ludovic Courtès2017-08-05
* | Merge branch 'master' into core-updatesMarius Bakke2017-08-01
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| * gnu: metabat: Limit to x86_64 and i686 only.Efraim Flashner2017-08-01
| * gnu: metabat: Update to 2.11.2.Ben Woodcroft2017-07-29
* | gnu: metabat: Fix boost-related compilation issue.Ben Woodcroft2017-07-23
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* gnu: metabat: Update to 2.11.1.Ben Woodcroft2017-07-23
* gnu: python-plastid: Update to 0.4.8.Ben Woodcroft2017-07-23
* gnu: bcftools: Update to 1.5.Ben Woodcroft2017-07-23
* gnu: samtools: Update to 1.5.Ben Woodcroft2017-07-23
* gnu: htslib: Update to 1.5.Ben Woodcroft2017-07-23
* gnu: python-pysam: Update to 0.11.2.2.Ben Woodcroft2017-07-23
* gnu: bamm: Use htslib-1.3.Ben Woodcroft2017-07-23
* gnu: bcftools: Update to 1.4.1.Ben Woodcroft2017-07-23
* gnu: samtools: Update to 1.4.1.Ben Woodcroft2017-07-23
* gnu: htslib: Update to 1.4.1.Ben Woodcroft2017-07-23
* gnu: samtools: Use "modify-phases" syntax.Ben Woodcroft2017-07-23
* gnu: r-s4vectors: Update to 0.14.3.Ricardo Wurmus2017-07-22
* gnu: r-genomicranges: Update to 1.28.4.Ricardo Wurmus2017-07-22
* gnu: r-bsgenome-hsapiens-ucsc-hg19: Update hash.Ricardo Wurmus2017-07-19
* gnu: sortmerna: Limit support to x86_64 and i686 only.Efraim Flashner2017-07-19
* gnu: raxml: Limit to x86_64 and i686 only.Efraim Flashner2017-07-18
* gnu: bowtie: Use 'modify-phases'.Ben Woodcroft2017-07-14
* gnu: bowtie: Update to 2.3.2.Ben Woodcroft2017-07-14
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