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* gnu: r-rcas: Update to 1.1.1.Ricardo Wurmus2016-12-27
* gnu: diamond: Update to 0.8.30.Ben Woodcroft2016-12-27
* gnu: cutadapt: Use ‘modify-phases’ syntax.Tobias Geerinckx-Rice2016-12-20
* gnu: cutadapt: Update to 1.12.Tobias Geerinckx-Rice2016-12-19
* gnu: Add attribution line for Raoul Bonnal.Ben Woodcroft2016-12-18
* gnu: star: Update to 2.5.2b.Raoul Bonnal2016-12-17
* gnu: Update more dead Google Code home pages.Tobias Geerinckx-Rice2016-12-14
* gnu: diamond: Update to 0.8.29.Ben Woodcroft2016-12-13
* gnu: orfm: Update to 0.6.1.Ben Woodcroft2016-12-13
* gnu: orfm: Update to 0.6.0.Ben Woodcroft2016-12-12
* gnu: vsearch: Update to 2.3.4.Ben Woodcroft2016-12-10
* gnu: pardre: Update to 1.1.5-1.Ben Woodcroft2016-12-10
* gnu: vsearch: Update to 2.3.3.Ben Woodcroft2016-12-08
* gnu: aragorn: Update to 1.2.38.Ben Woodcroft2016-12-04
* Merge branch 'master' into python-build-systemHartmut Goebel2016-11-29
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| * gnu: Add r-gkmsvm.Ricardo Wurmus2016-11-28
| * gnu: Add r-seqgl.Ricardo Wurmus2016-11-28
| * gnu: Add r-chipkernels.Ricardo Wurmus2016-11-28
| * gnu: Add r-wgcna.Ricardo Wurmus2016-11-28
| * gnu: Add r-r4rna.Ricardo Wurmus2016-11-28
| * gnu: Add newick-utils.Ben Woodcroft2016-11-28
| * gnu: roary: Update to 3.7.0.Ben Woodcroft2016-11-26
| * gnu: Add proteinortho.Ben Woodcroft2016-11-26
* | Merge branch 'master' into python-build-systemLeo Famulari2016-11-25
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| * gnu: diamond: Update to 0.8.27.Ben Woodcroft2016-11-22
| * gnu: Remove redundancy where mkdir-p <dir> is followed by install-file <file>...Petter2016-11-21
| * gnu: hisat: Fix typo.Ricardo Wurmus2016-11-15
* | gnu: python2-pbcore: Fix inputs:Hartmut Goebel2016-11-15
* | gnu: python2-warpedlmm: Remove phase remove-bin-directory.Hartmut Goebel2016-11-15
* | gnu: Fix python inputs, part 7: Ensure python-cython is a native-input.Hartmut Goebel2016-11-15
* | gnu: Fix python inputs, part 1: all inputs become propagated-inputs.Hartmut Goebel2016-11-15
* | gnu: Remove work-arounds for bug 20765 (ensure uncompressed eggs).Hartmut Goebel2016-11-15
* | gnu: Remove python-setuptools and python2-setuptools from inputs (part 4a)Hartmut Goebel2016-11-15
* | gnu: Remove python-setuptools and python2-setuptools from inputs (part 3)Hartmut Goebel2016-11-15
* | gnu: Remove python-setuptools and python2-setuptools from inputs (part 2)Hartmut Goebel2016-11-15
* | gnu: Remove python-setuptools and python2-setuptools from inputs (part 1b)Hartmut Goebel2016-11-15
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* gnu: r-org-mm-eg-db: Update to 3.4.0.Ricardo Wurmus2016-11-11
* gnu: r-org-dm-eg-db: Update to 3.4.0.Ricardo Wurmus2016-11-11
* gnu: r-org-ce-eg-db: Update to 3.4.0.Ricardo Wurmus2016-11-11
* gnu: r-org-hs-eg-db: Update to 3.4.0.Ricardo Wurmus2016-11-11
* gnu: diamond: Update to 0.8.26.Ben Woodcroft2016-11-07
* gnu: r-rcas: Update to 1.0.0.Ricardo Wurmus2016-11-03
* gnu: r-rtracklayer: Update to 1.34.1.Ricardo Wurmus2016-11-03
* gnu: r-biocparallel: Update to 1.8.1.Ricardo Wurmus2016-11-03
* gnu: r-limma: Update to 3.30.2.Ricardo Wurmus2016-11-03
* gnu: r-edger: Update to 3.16.1.Ricardo Wurmus2016-11-03
* gnu: python-twobitreader: Update to 3.1.4.Leo Famulari2016-10-28
* gnu: python-twobitreader: Disable the test suite.Leo Famulari2016-10-28
* gnu: Add r-mutationalpatterns.Roel Janssen2016-10-27
* gnu: r-seqinr: Update to 3.3-3.Ricardo Wurmus2016-10-26
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