| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): ...to here.
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* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.
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* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
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* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): ...to here.
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* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Move from here...
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
...to here.
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* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
...to here.
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* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.
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* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
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* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.
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* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
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* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.
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bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
...to here.
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* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move
from here...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to
here.
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* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here...
* gnu/packages/bioconductor.scm (r-geneplotter): ...to here.
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* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
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This is a follow-up to commit 1fe9a36173335b559c695357bc8d884f1d4b144a.
* gnu/packages/bioconductor.scm: Update copyright header to account for moved
package.
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* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
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* gnu/packages/bioconductor.scm (r-htscluster): New variable.
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* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
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* gnu/packages/bioinformatics.scm (r-biocgenerics): Move from here...
* gnu/packages/bioconductor.scm (r-biocgenerics): ...to here.
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* gnu/packages/bioinformatics.scm (r-annotate): Move from here...
* gnu/packages/bioconductor.scm (r-annotate): ...to here.
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* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.1.
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* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.1.
[propagated-inputs]: Add r-deseq2, r-plgem, r-shiny, r-summarizedexperiment,
and r-txdb-mmusculus-ucsc-mm9-knowngene.
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* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene): New
variable.
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* gnu/packages/bioconductor.scm (r-plgem): New variable.
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* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.1.
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* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.1.
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* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.1.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.1.
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* gnu/packages/bioconductor.scm (r-chipexoqual): New variable.
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* gnu/packages/bioconductor.scm (r-destiny): New variable.
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* gnu/packages/bioconductor.scm (r-savr): New variable.
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* gnu/packages/bioconductor.scm (r-regioner): Update to 1.14.0.
[propagated-inputs]: Add r-biostrings.
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* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-biocneighbors): New variable.
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* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-ctc): Update to 1.56.0.
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* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.16.0.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.0.
[propagated-inputs]: Remove r-biocinstaller; add r-biocmanager.
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* gnu/packages/bioconductor.scm (r-graph): Update to 1.60.0.
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