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* gnu: r-multiassayexperiment: Update to 1.12.6.Ricardo Wurmus2020-03-27
| | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.6.
* gnu: r-mast: Add r-knitr to native inputs.Ricardo Wurmus2020-03-25
| | | | * gnu/packages/bioconductor.scm (r-mast)[native-inputs]: Add r-knitr.
* gnu: r-multiassayexperiment: Update to 1.12.5.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.5. [native-inputs]: Add r-knitr.
* gnu: r-bigpint: Update to 1.2.2.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioconductor.scm (r-bigpint): Update to 1.2.2. [native-inputs]: Add r-knitr.
* gnu: r-biosigner: Update to 1.14.4.Ricardo Wurmus2020-03-24
| | | | * gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.4.
* gnu: r-gosemsim: Update to 2.12.1.Ricardo Wurmus2020-03-24
| | | | | * gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.12.1. [native-inputs]: Add r-knitr.
* gnu: r-biocpkgtools: Update to 1.4.6.Ricardo Wurmus2020-03-19
| | | | | | | * gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.4.6. [propagated-inputs]: Add r-biocfilecache, r-rappdirs, r-rlang, and r-tidyselect. [native-inputs]: Add r-knitr.
* gnu: r-biosigner: Update to 1.14.2.Ricardo Wurmus2020-03-19
| | | | | * gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.2. [native-inputs]: Remove r-rmarkdown, pandoc, and pandoc-citeproc.
* gnu: r-htqpcr: Update home page.Tobias Geerinckx-Rice2020-03-17
| | | | | * gnu/packages/bioconductor.scm (r-htqpcr)[home-page]: Use HTTPS link to PDF paper.
* gnu: r-cicero: Update to 1.4.4.Ricardo Wurmus2020-03-12
| | | | | * gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.4. [native-inputs]: Add r-knitr.
* gnu: r-ggcyto: Update to 1.14.1.Ricardo Wurmus2020-03-12
| | | | | * gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.14.1. [native-inputs]: Add r-knitr.
* gnu: r-mlinterfaces: Update to 1.66.5.Ricardo Wurmus2020-03-12
| | | | * gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.5.
* gnu: r-atacseqqc: Update to 1.10.3.Ricardo Wurmus2020-03-08
| | | | | * gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.3. [native-inputs]: Add r-knitr.
* gnu: r-multiassayexperiment: Update to 1.12.4.Ricardo Wurmus2020-03-07
| | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.4.
* gnu: r-depecher: Update to 1.2.2.Ricardo Wurmus2020-03-07
| | | | | * gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.2. [native-inputs]: Add r-knitr.
* gnu: r-xcms: Update to 3.8.2.Ricardo Wurmus2020-03-07
| | | | * gnu/packages/bioconductor.scm (r-xcms): Update to 3.8.2.
* gnu: r-yamss: Update to 1.12.1.Ricardo Wurmus2020-03-07
| | | | * gnu/packages/bioconductor.scm (r-yamss): Update to 1.12.1.
* gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.10.0.Tobias Geerinckx-Rice2020-03-02
| | | | * gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Update to 3.10.0.
* gnu: r-multiassayexperiment: Update to 1.12.3.Ricardo Wurmus2020-03-01
| | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.3.
* gnu: r-cicero: Update to 1.4.2.Ricardo Wurmus2020-03-01
| | | | * gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.2.
* gnu: r-mlinterfaces: Update to 1.66.4.Ricardo Wurmus2020-03-01
| | | | * gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.4.
* gnu: r-biocneighbors: Update to 1.4.2.Ricardo Wurmus2020-03-01
| | | | * gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.4.2.
* gnu: r-chippeakanno: Update to 3.20.1.Ricardo Wurmus2020-03-01
| | | | * gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.20.1.
* gnu: r-gkmsvm: Update to 0.80.0.Ricardo Wurmus2020-03-01
| | | | | | * gnu/packages/bioconductor.scm (r-gkmsvm): Update to 0.80.0. [propagated-inputs]: Remove r-biocgenerics, r-biostrings, r-genomeinfodb, r-iranges, r-rtracklayer, and r-s4vectors.
* gnu: Add r-bsgenome-hsapiens-ncbi-grch38.Mădălin Ionel Patrașcu2020-02-25
| | | | | | * gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ncbi-grch38): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-genomicinteractions: Update to 1.20.1.Ricardo Wurmus2020-02-22
| | | | * gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.20.1.
* gnu: r-cicero: Update to 1.4.1.Ricardo Wurmus2020-02-22
| | | | | * gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.1. [propagated-inputs]: Add r-tidyr.
* gnu: r-ggm: Move to (gnu packages bioconductor).Ricardo Wurmus2020-02-22
| | | | | * gnu/packages/cran.scm (r-ggm): Move this variable from here... * gnu/packages/bioconductor.scm (r-ggm): ...to here.
* gnu: r-depecher: Update to 1.2.1.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.1.
* gnu: r-mixomics: Update to 6.10.8.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.8.
* gnu: r-rsubread: Update to 2.0.1.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-rsubread): Update to 2.0.1.
* gnu: r-atacseqqc: Update to 1.10.2.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.2.
* gnu: r-heatplus: Update to 2.32.1.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-heatplus): Update to 2.32.1.
* gnu: r-biocsingular: Update to 1.2.2.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.2.
* gnu: r-inspect: Update to 1.16.3.Ricardo Wurmus2020-02-19
| | | | * gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.3.
* gnu: r-nmf: Update to 0.22.0.Ricardo Wurmus2020-02-19
| | | | | * gnu/packages/bioconductor.scm (r-nmf): Update to 0.22.0. [propagated-inputs]: Add r-biobase and r-biocmanager.
* gnu: r-nmf: Move to (gnu packages bioconductor).Ricardo Wurmus2020-02-19
| | | | | * gnu/packages/statistics.scm (r-nmf): Move this variable from here... * gnu/packages/bioconductor.scm (r-nmf): ...to here.
* gnu: r-lpsymphony: Use HTTPS home page.Tobias Geerinckx-Rice2020-02-11
| | | | * gnu/packages/bioconductor.scm (r-lpsymphony)[home-page]: Use HTTPS.
* gnu: r-codedepends: Use HTTPS home page.Tobias Geerinckx-Rice2020-02-11
| | | | * gnu/packages/bioconductor.scm (r-codedepends)[home-page]: Use HTTPS.
* gnu: r-multiassayexperiment: Use HTTPS home page.Tobias Geerinckx-Rice2020-02-11
| | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment)[home-page]: Use HTTPS.
* gnu: Add r-deconstructsigs.Roel Janssen2020-01-27
| | | | | | * gnu/packages/bioconductor.scm (r-deconstructsigs): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: r-multiassayexperiment: Update to 1.12.2.Ricardo Wurmus2020-01-27
| | | | * gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.2.
* gnu: r-ropls: Update to 1.18.8.Ricardo Wurmus2020-01-27
| | | | * gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.8.
* gnu: r-destiny: Update to 3.0.1.Ricardo Wurmus2020-01-27
| | | | * gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.1.
* gnu: r-metap: Update to 1.3.Ricardo Wurmus2020-01-27
| | | | * gnu/packages/bioconductor.scm (r-metap): Update to 1.3.
* gnu: r-biocset: Fix spelling of "ability".base-for-series-2714Vagrant Cascadian2020-01-24
| | | | * gnu/packages/bioconductor (r-biocset)[description]: Fix typo.
* gnu: Use HTTPS for bioconductor.org.Tobias Geerinckx-Rice2020-01-21
| | | | | | | | * gnu/packages/bioinformatics.scm (r-homo-sapiens)[source]: Use HTTPS. * gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked, r-cghcall, r-diffbind, r-cghbase, r-ripseeker, r-chippeakanno, r-qdnaseq, r-marray, r-multtest)[home-page]: Likewise. * gnu/packages/graph.scm (r-rgraphviz)[home-page]: Likewise.
* gnu: r-variancepartition: Update to 1.16.1.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.16.1.
* gnu: r-flowworkspace: Update to 3.34.1.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/bioconductor.scm (r-flowworkspace): Update to 3.34.1.
* gnu: r-ropls: Update to 1.18.6.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.6.
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