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* Merge branch 'master' into core-updatesMarius Bakke2020-03-27
|\ | | | | | | | | | | | | | | | | | | | | | | Conflicts: gnu/packages/icu4c.scm gnu/packages/man.scm gnu/packages/python-xyz.scm guix/scripts/environment.scm guix/scripts/pack.scm guix/scripts/package.scm guix/scripts/pull.scm guix/store.scm
| * gnu: gnupg: Use ~/.guix-profile/bin/pinentry by default.Ludovic Courtès2020-03-26
| | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/24076>. Reported by Danny Milosavljevic <dannym@scratchpost.org>. * gnu/packages/patches/gnupg-default-pinentry.patch: New file. * gnu/packages/gnupg.scm (gnupg)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: linux-libre-5.4-source: Add patch to support pinebook pro.Vagrant Cascadian2020-03-25
| | | | | | | | | | | | | | * gnu/packages/patches/linux-libre-support-for-Pinebook-Pro.patch: New file. * gnu/local.mk (dist_patch_DATA): Update accordingly. * gnu/packages/linux (linux-libre-5.4-source): Add patch.
| * gnu: icu4c: Fix CVE-2020-10531.Leo Famulari2020-03-25
| | | | | | | | | | | | | | * gnu/packages/patches/icu4c-CVE-2020-10531.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/icu4c.scm (icu4c)[replacement]: New field. (icu4c/fixed): New variable.
| * gnu: Add circos.Roel Janssen2020-03-23
| | | | | | | | | | | | * gnu/local.mk: Register circos-remove-findbin.patch. * gnu/packages/patches/circos-remove-findbin.patch: New file. * gnu/packages/perl.scm: New variable.
| * system: Add kernel-loadable-modules to operating-system.Danny Milosavljevic2020-03-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/system.scm (<operating-system>): Add kernel-loadable-modules. (operating-system-directory-base-entries): Use it. * doc/guix.texi (operating-system Reference): Document KERNEL-LOADABLE-MODULES. * gnu/build/linux-modules.scm (depmod): New procedure. (make-linux-module-directory): New procedure. Export it. * guix/profiles.scm (linux-module-database): New procedure. Export it. * gnu/tests/linux-modules.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/linux.scm (make-linux-libre*)[arguments]<#:phases>[install]: Disable depmod. Remove "build" and "source" symlinks. [native-inputs]: Remove kmod.
* | gnu: OpenSSL: Add upstream patch to preserve compatibility in EOF handling.Marius Bakke2020-03-26
| | | | | | | | | | | | | | | | | | This is a follow-up to ad8254c23a86c3ca4ca32bc68fc8d76954aa80fd, which unexpectedly caused a test failure in the Python test suite. * gnu/packages/patches/openssl-1.1.1e-revert-detect-eof.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/tls.scm (openssl)[source](patches): Add it.
* | gnu: potrace: Update to 1.16.Marius Bakke2020-03-26
| | | | | | | | | | | | | | * gnu/packages/patches/potrace-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/fontutils.scm (potrace): Update to 1.16. [source](patches): Remove.
* | gnu: gd: Update to 2.3.0.Marius Bakke2020-03-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/gd-fix-tests-on-i686.patch: Adjust context. * gnu/packages/patches/gd-CVE-2018-1000222.patch, gnu/packages/patches/gd-CVE-2018-5711.patch, gnu/packages/patches/gd-CVE-2019-6977.patch, gnu/packages/patches/gd-CVE-2019-6978.patch, gnu/packages/patches/gd-freetype-test-failure.patch: Delete files. * gnu/packages/patches/gd-brect-bounds.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly * gnu/packages/gd.scm (gd): Update to 2.3.0. [source](patches): Remove obsolete. * gnu/packages/gd.scm (gd): [propagated-inputs]: Move LIBJPEG-TURBO and FONTCONFIG ... [inputs]: ... here.
* | gnu: mit-krb5: Supprt for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | * gnu/packages/patches/mit-krb5-hurd.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kerberos.scm (mit-krb5): Use it.
* | gnu: shadow: Build fix for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | * gnu/packages/patches/shadow-hurd-pctrl.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (shadow): Use it.
* | gnu: screen: Build fix for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | * gnu/packages/patches/screen-hurd-path-max.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/screen.scm (screen): Use it.
* | gnu: inetutils: Support for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | | | | | | | * gnu/packages/linux.scm (net-tools)[supported-systems]: Remove the Hurd. * gnu/packages/patches/inetutils-hurd.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (inetutils): Use it. Disable some features on the Hurd. [native-inputs]: Include net-tools only on supported systems
* | gnu: shepherd: Build fix for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | * gnu/packages/patches/shepherd-hurd.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (shepherd): Use it.
* | gnu: pciutils: Build fixes for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | | | | | * gnu/packages/linux.scm (kmod)[supported-systems]: Remove the Hurd. * gnu/packages/patches/pciutils-hurd-configure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pciutils.scm (pciutils): Use it. [inputs]: Include kmod only for supported systems.
* | gnu: fontconfig: Build fix for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | * gnu/packages/patches/fontconfig-hurd-path-max.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/fontutils.scm (fontconfig): Use it.
* | gnu: less: Build fix for the Hurd.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | * gnu/packages/patches/less-hurd-path-max.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/less.scm (less): Use it.
* | gnu: hurd: Update to hurd-headers version: 0.9-91a51672.Jan Nieuwenhuizen2020-03-26
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/hurd-cross.patch: New file. * gnu/packages/patches/hurd-fix-eth-multiplexer-dependency.patch: Remove unused file. * gnu/local.mk (dist_patch_DATA): Update admin. * gnu/packages/hurd.scm (hurd): Update to latest git master: version and source from hurd-headers; Add hurd-cross patch.
* | gnu: bootstrap: gcc-static: Use gcc-5.Jan Nieuwenhuizen2020-03-24
| | | | | | | | | | | | | | | | | | | | * gnu/packages/make-bootstrap.scm (gcc-static): Use gcc-5. This fixes building libstdc++-boot0 with a newly built %bootstrap-gcc. (%gcc-stripped): Likewise. (gcc-for-bootstrap): Likewise. * gnu/packages/patches/gcc-5-hurd.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gcc.scm (gcc-5): Use it.
* | Revert "gnu: guile-static-stripped: Update to 2.2."Jan Nieuwenhuizen2020-03-24
| | | | | | | | | | | | | | | | | | | | | | | | As discussed on IRC, keeping bootstrap Guile on 2.0 simplifies adding new architectures and removes the need for parameterizing gnu/packages/bootstrap.scm. This reverts commit 2acfe022a740f79b593348cc6362cc4ee8f33bb4. * gnu/packages/make-bootstrap.scm (%guile-static): Revert to guile-2.0. Retain build recipe. * gnu/packages/patches/guile-relocatable.patch: Update for Guile 2.0.14.
* | gnu: glibc: Add signal SA_SIGINFO support for the Hurd.Jan Nieuwenhuizen2020-03-24
| | | | | | | | | | | | * gnu/packages/patches/glibc-hurd-signal-sa-siginfo.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (glibc): Use it.
* | gnu: glibc: Add clock patches for the Hurd.Jan Nieuwenhuizen2020-03-24
| | | | | | | | | | | | | | * gnu/packages/patches/glibc-hurd-clock_t_centiseconds.patch: New file. * gnu/packages/patches/glibc-hurd-clock_gettime_monotonic.patch: New file. * gnu/local.mk (dist_patch_DATA): Update them. * gnu/packages/base.scm (glibc): Use them.
* | gnu: grub: Support for the Hurd.Jan Nieuwenhuizen2020-03-24
| | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/virtualization.scm (qemu)[supported-systems]: Remove the Hurd. * gnu/packages/linux.scm (mdadm)[supported-systems]: Likewise. (lvm2)[supported-systems]: Likewise. (fuse)[supported-systems]: Likewise. * gnu/packages/patches/grub-verifiers-Blocklist-fallout-cleanup.patch: New file * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bootloaders.scm (grub): Use it. [inputs, native-inputs]: Remove non-supported dependencies on non-supported systems. Fixes build for the Hurd.
* | gnu: ghc@8.0: Remove obsolete patch.Marius Bakke2020-03-24
| | | | | | | | | | | | | | * gnu/packages/patches/ghc-dont-pass-linker-flags-via-response-files.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/haskell.scm (ghc-8.0)[source](patches): Remove it.
* | gnu: ghc: Really disable test that fails with glibc 2.30 and later.Marius Bakke2020-03-24
| | | | | | | | | | | | | | | | | | | | | | | | This follows up commit 2e9c43aa9adac2bd6bcf92373d1cf9f322afa5a3, which was incomplete. Fixes <https://bugs.gnu.org/39358>. * gnu/packages/patches/ghc-testsuite-dlopen-pie.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Also use tabs instead of spaces on surrounding patches. * gnu/packages/haskell.scm (ghc-8.6)[native-inputs]: Add patch for "ghc-testsuite". [arguments]: Remove incomplete workaround for the same issue.
* | gnu: cross-gcc: Add a "lib" output.Mathieu Othacehe2020-03-24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add a "lib" output to cross-gcc. This requires an upstream GCC patch adding support for --with-toolexeclibdir configure option. This option allows to install cross-built GCC libraries in a specific location. This also fixes the computation of TOOLDIR_BASE_PREFIX, that fails when /gnu/store/... directories are involved. * gnu/packages/patches/gcc-7-cross-toolexeclibdir.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/cross-base.scm (cross-gcc)[source]: Apply it, [outputs]: add a "lib" output, (cross-gcc-snippet): fix TOOLDIR_BASE_PREFIX.
* | Merge branch 'master' into core-updatesMarius Bakke2020-03-21
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| * gnu: blktrace: Update to db4f634.base-for-series-3238Vincent Legoll2020-03-21
| | | | | | | | | | | | | | | | | | | | * gnu/packages/linux.scm (blktrace): Update to db4f634. [revision]: Increment variable. [patches]: Remove variable. * gnu/packages/patches/blktrace-use-rmtree.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
| * gnu: Add hash-extender.Jakub Kądziołka2020-03-21
| | | | | | | | | | | | * gnu/packages/crypto.scm (hash-extender): New variable. * gnu/packages/patches/hash-extender-test-suite.patch: New file. * gnu/local.mk (dist_patch_DATA): Register the new file.
| * gnu: gRPC: Move to (gnu packages rpc).Marius Bakke2020-03-21
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (grpc): Move to ... * gnu/packages/rpc.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly. * gnu/packages/hyperledger.scm: Adjust module imports.
| * gnu: FFmpeg: Prefer dav1d over libaom.Leo Famulari2020-03-20
| | | | | | | | | | | | * gnu/packages/patches/ffmpeg-prefer-dav1d.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/video.scm (ffmpeg)[source]: Use it.
| * gnu: Update python-faker to to 4.0.2, python2-faker to 3.0.1.Marius Bakke2020-03-20
| | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-faker-fix-build-32bit.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python-xyz.scm (python-faker): Update to 4.0.2. [source](patches, modules, snippet): Remove. [arguments]: Adjust check phase. [native-inputs]: Remove PYTHON-EMAIL-VALIDATOR and PYTHON-MOCK. Add PYTHON-FREEZEGUN, PYTHON-PYTEST, PYTHON-RANDOM2, and PYTHON-VALIDATORS. [propagated-inputs]: Remove PYTHON-SIX. Add PYTHON-TEXT-UNIDECODE. (python2-faker): Update to 3.0.1. [native-inputs]: Add PYTHON2-MOCK.
| * gnu: Add blktrace.Vincent Legoll2020-03-20
| | | | | | | | | | | | | | | | * gnu/packages/linux.scm (blktrace): New variable. * gnu/packages/patches/blktrace-use-rmtree.patch: Add file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: Add foobillard++.Nicolas Goaziou2020-03-19
| | | | | | | | | | | | * gnu/packages/games.scm (foobillard++): New variable. * gnu/packages/patches/foobillard++-pkg-config.patch: New file. * gnu/local.mk: Reference new file.
| * gnu: Add date.Brendan Tildesley2020-03-19
| | | | | | | | | | | | | | | | * gnu/packages/wm.scm (date): New variable. * gnu/packages/patches/date-output-pkg-config-files.patch: New file. * gnu/local.mk: Add patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: Fix typo.Efraim Flashner2020-03-19
| | | | | | | | | | | | This is a follow-up to 83a4ab4e4213eaf10289f0abd8a43979178701d7. * gnu/local.mk (dist_patch_DATA): Fix typo in patch name.
| * gnu: Add kdiagram.Hartmut Goebel2020-03-19
| | | | | | | | | | | | * gnu/packages/kde.scm (kdiagram): New variable. * packages/patches/kdiagram-Fix-missing-link-libraries.patch: New file. * gnu/local.mk: Add it.
| * gnu: Add kmail.Hartmut Goebel2020-03-19
| | | | | | | | | | | | | | * gnu/packages/kde-pim.scm (kmail): New variable. * gnu/packages/patches/kmail-Fix-missing-link-libraries.patch: New file. * gnu/local.mk: Add it.
| * gnu: Add kdepim-runtime.Hartmut Goebel2020-03-19
| | | | | | | | | | | | | | * gnu/packages/kde-pim.scm (kdepim-runtime): New variable. * gnu/packages/patches/kdepim-runtime-Fix-missing-link-libraries.patch: New file. * gnu/local.mk: Add it.
| * gnu: Add libksieve.Hartmut Goebel2020-03-19
| | | | | | | | | | | | | | * gnu/packages/kde-pim.scm (libksieve): New variable. * gnu/packages/patches/libksieve-Fix-missing-link-libraries.patch: New file. * gnu/local.mk: Add it.
* | gnu: GCC@9: Remove obsolete patch.Marius Bakke2020-03-18
| | | | | | | | | | | | | | | | This patch became obsolete when the update to 9.3.0 was merged (commit 3dade1d59e7b4caa641670a76c0c48b4c90f6b3c). * gnu/packages/patches/gcc-9-libsanitizer-mode-size.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/gcc.scm (gcc-9)[source](patches): Remove it.
* | Merge branch 'master' into core-updatesMarius Bakke2020-03-18
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| * gnu: eigen: Update to 3.3.7.Tobias Geerinckx-Rice2020-03-17
| | | | | | | | | | | | | | * gnu/packages/algebra.scm (eigen): Update to 3.3.7. [source]: Add a patch to fix a test failure. * gnu/packages/patches/eigen-stabilise-sparseqr-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: beets: Fix build with newer Werkzeug.Marius Bakke2020-03-16
| | | | | | | | | | | | * gnu/packages/patches/beets-werkzeug-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/music.scm (beets)[source](patches): New field.
| * gnu: python-flask-restful: Update to 0.3.8.Marius Bakke2020-03-16
| | | | | | | | | | | | | | | | * gnu/packages/patches/python-flask-restful-werkzeug-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python-web.scm (python-flask-restful): Update to 0.3.8. [source](patches): New field. [native-inputs]: Remove PYTHON-SPHINX.
| * Revert "gnu: BlueZ: Update to 5.54."Leo Famulari2020-03-15
| | | | | | | | | | | | This reverts commit f24aaa81de8c709adfda2e89271c562a5ca8d959. This change caused too many rebuilds for the master branch.
| * gnu: BlueZ: Update to 5.54.Vincent Legoll2020-03-15
| | | | | | | | | | | | | | | | | | | | * gnu/packages/linux.scm (bluez): Update to 5.54. [replacement]: Remove field. (bluez/fixed): Remove variable. * gnu/packages/patches/bluez-CVE-2020-0556.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Leo Famulari <leo@famulari.name>
| * gnu: python-alembic: Update to 1.4.1.Marius Bakke2020-03-15
| | | | | | | | | | | | | | | | * gnu/packages/patches/python-alembic-exceptions-cause.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/databases.scm (python-alembic): Update to 1.4.1. [source](patches): New field. [arguments]: New field, override check phase.
| * gnu: python-jedi: Update to 0.16.Marius Bakke2020-03-15
| | | | | | | | | | | | | | * gnu/packages/patches/python-jedi-deleted-variables.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python-xyz.scm (python-jedi): Update to 0.16. [source](patches): New field.
| * gnu: Add bidiv.Efraim Flashner2020-03-15
| | | | | | | | | | | | * gnu/packages/fribidi.scm (bidiv): New variable. * gnu/packages/patches/bidiv-update-fribidi.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
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