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* gnu: libzip: Update to 1.3.0 (fixes CVE-2017-14107).Efraim Flashner2017-09-06
| | | | | | | | * gnu/packages/compression.scm (libzip): Update to 1.3.0. [source]: Remove patch. [arguments]: Remove custom 'patch-perl phase. * gnu/packages/patches/libzip-CVE-2017-12858.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: openjpeg: Fix CVE-2017-14151, CVE-2017-14152.Efraim Flashner2017-09-06
| | | | | | | * gnu/packages/image.scm (openjpeg)[source]: Add patches. * gnu/packages/patches/openjpeg-CVE-2017-14151.patch, gnu/packages/patches/openjpeg-CVE-2017-14152.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
* gnu: csound: Update to 6.09.1.Nicolas Goaziou2017-09-06
| | | | | | * gnu/packages/audio.scm (csound): Update to 6.09.1. Change source URI. * gnu/packages/patches/csound-header-ordering.patch: Remove patch. * gnu/local.mk (dist_patch_DATA): Remove reference to patch above.
* gnu: Update calibre to 3.6.0.Roel Janssen2017-09-06
| | | | | | | * gnu/local.mk: Remove calibre-drop-unrar.patch * gnu/packages/ebook.scm (calibre): Update to 3.6.0. Add python-html5-parser input. * gnu/packages/patches/calibre-drop-unrar.patch: Remove file.
* gnu: file: Fix CVE-2017-1000249.Efraim Flashner2017-09-05
| | | | | | | | * gnu/packages/file.scm (file)[replacement]: New field. (file/fixed): New variable. * gnu/packages/commencement.scm (file-boot0): Use package/inherit. * gnu/packages/patches/file-CVE-2017-1000249.patch. * gnu/local.mk (dist_patch_DATA): Register it.
* gnu: tcpdump: Fix CVE-2017-[11541,11542,11543].Leo Famulari2017-09-05
| | | | | | | | * gnu/packages/patches/tcpdump-CVE-2017-11541.patch, gnu/packages/patches/tcpdump-CVE-2017-11542.patch gnu/packages/patches/tcpdump-CVE-2017-11543.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/admin.scm (tcpdump)[source]: Use them.
* gnu: node: Update to 8.4.0.Jelle Licht2017-09-02
| | | | | | | * gnu/packages/patches/node-9077.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/node.scm (node): Update to 8.4.0. (node)[arguments]: Removed broken linter test. Removed dns test.
* gnu: openjpeg: Fix CVE-2017-{14040,14041}.Kei Kebreau2017-09-02
| | | | | | | * gnu/packages/image.scm (openjpeg)[source]: Add patches. * gnu/packages/patches/openjpeg-CVE-2017-14040.patch, gnu/packages/patches/openjpeg-CVE-2017-14041.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
* gnu: metabat: Update to 2.12.1.Ben Woodcroft2017-09-01
| | | | | | | * gnu/packages/patches/metabat-remove-compilation-date.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/bioinformatics.scm (metabat): Update to 2.12.1. [source]: Remove it. Use url-fetch.
* gnu: python2-larch: Enable tests.Arun Isaac2017-09-01
| | | | | | | | * gnu/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python2-larch)[source]: Use it. [arguments]: Move 'check' phase to before 'build' phase.
* gnu: graphicsmagick: Fix CVE-2017-{13775,13776,13777}.Efraim Flashner2017-09-01
| | | | | | | | * gnu/packages/imagemagick.scm (graphicsmagick)[source]: Add patches. * gnu/packages/patches/graphicsmagick-CVE-2017-13775.patch, gnu/packages/patches/graphicsmagick-CVE-2017-13776+CVE-2017-13777.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
* gnu: libxml2: Fix CVE-2017-{0663,7375,7376,9047,9048,9049,9050}.Alex Vong2017-08-31
| | | | | | | | | | | | | * gnu/packages/patches/libxml2-CVE-2017-0663.patch, gnu/packages/patches/libxml2-CVE-2017-7375.patch, gnu/packages/patches/libxml2-CVE-2017-7376.patch, gnu/packages/patches/libxml2-CVE-2017-9047+CVE-2017-9048.patch, gnu/packages/patches/libxml2-CVE-2017-9049+CVE-2017-9050.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xml.scm (libxml2)[replacement]: New field. (libxml2/fixed): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: ruby-2.2.7: Fix CVE-2017-{0899,0900,0901,0902}.Ben Woodcroft2017-08-31
| | | | | | * gnu/packages/patches/ruby-2.2.7-rubygems-2613-ruby22.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ruby.scm (ruby-2.2.7)[source]: Use it.
* gnu: ruby-2.3.4: Fix CVE-2017-{0899,0900,0901,0902}.Ben Woodcroft2017-08-31
| | | | | | * gnu/packages/patches/ruby-2.3.4-rubygems-2613-ruby23.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ruby.scm (ruby-2.3.4)[source]: Use it.
* gnu: ruby-2.4.1: Fix CVE-2017-{0899,0900,0901,0902}.Ben Woodcroft2017-08-31
| | | | | | | * gnu/packages/patches/ruby-rubygems-2612-ruby24.patch, gnu/packages/patches/ruby-rubygems-2613-ruby24.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/ruby.scm (ruby-2.4.1)[source]: Use them.
* gnu: metabat: Update to 2.11.3.Ben Woodcroft2017-08-31
| | | | | | | * gnu/packages/bioinformatics.scm (metabat): Update to 2.11.3. [source]: Use git-fetch. Remove boost-related patch. * gnu/packages/patches/metabat-fix-boost-issue.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: gd: Replace with 2.2.5.Marius Bakke2017-08-31
| | | | | | | | | | | Fixes CVE-2017-6362 and CVE-2017-7890. * gnu/packages/gd.scm (gd)[replacement]: New field. (gd-2.2.5): New variable. * gnu/packages/php.scm (gd-for-php): Remove variable (php)[inputs]: Replace GD-FOR-PHP with GD-2.2.5. * gnu/packages/patches/gd-CVE-2017-7890.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: qemu: Update to 2.10.0.Marius Bakke2017-08-30
| | | | | | | | | | | | | | | | | | * gnu/packages/patches/qemu-CVE-2017-10664.patch, gnu/packages/patches/qemu-CVE-2017-10806.patch, gnu/packages/patches/qemu-CVE-2017-10911.patch, gnu/packages/patches/qemu-CVE-2017-11334.patch, gnu/packages/patches/qemu-CVE-2017-11434.patch, gnu/packages/patches/qemu-CVE-2017-12809.patch: gnu/packages/patches/qemu-CVE-2017-7493.patch, gnu/packages/patches/qemu-CVE-2017-8112.patch, gnu/packages/patches/qemu-CVE-2017-8309.patch, gnu/packages/patches/qemu-CVE-2017-8379.patch, gnu/packages/patches/qemu-CVE-2017-8380.patch, gnu/packages/patches/qemu-CVE-2017-9524.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/virtualization.scm (qemu): Update to 2.10.0. [source](patches): Remove.
* gnu: multiqc: Update to 1.2.Ricardo Wurmus2017-08-30
| | | | | | | | | | * gnu/packages/bioinformatics.scm (multiqc): Update to 1.2. [source]: Remove patches. [arguments]: Remove to enable tests. [propagated-inputs]: Add python-spectra, python-requests, python-markdown, python-lzstring. * gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* Update e-mail for Kei Kebreau.Kei Kebreau2017-08-29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * .mailmap: Map kei@openmailbox.org to current address. * gnu/local.mk: Replace kei@openmailbox.org to current address. * gnu/packages/backup.scm: Likewise. * gnu/packages/calendar.scm: Likewise. * gnu/packages/check.scm: Likewise. * gnu/packages/compression.scm: Likewise. * gnu/packages/documentation.scm: Likewise. * gnu/packages/emacs.scm: Likewise. * gnu/packages/fltk.scm: Likewise. * gnu/packages/freedesktop.scm: Likewise. * gnu/packages/game-development.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/gnustep.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/hexedit.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/xfce.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/textutils.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/web-browsers.scm: Likewise. * gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
* gnu: libzip: Fix CVE-2017-12858.Leo Famulari2017-08-27
| | | | | | * gnu/packages/patches/libzip-CVE-2017-12858.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/compression.scm (libzip)[source]: Use it.
* gnu: wxwidgets: Update to 3.0.3.Leo Famulari2017-08-27
| | | | | | | * gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.0.3. [source]: Remove 'wxwidgets-fix-windowGTK.patch'. * gnu/packages/patches/wxwidgets-fix-windowGTK.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* Merge branch 'core-updates'Marius Bakke2017-08-26
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| * Merge branch 'master' into core-updatesMarius Bakke2017-08-21
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| * \ Merge branch 'master' into core-updatesMark H Weaver2017-08-15
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| * \ \ Merge branch 'master' into core-updatesMark H Weaver2017-08-11
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| * \ \ \ Merge branch 'master' into core-updatesMark H Weaver2017-08-09
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| * \ \ \ \ Merge branch 'master' into core-updatesMark H Weaver2017-08-07
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| * | | | | | gnu: texlive: Update to 2017.Leo Famulari2017-08-07
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/tex.scm (texlive, texlive-texmf): Update to 2017. (texlive-texmf-src): Update to 20170524. Remove 'texlive-texmf-CVE-2016-10243.patch'. (texlive-bin, texlive-extra-src): Update to 20170524. * gnu/packages/patches/texlive-texmf-CVE-2016-10243.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * | | | | | Merge branch 'master' into core-updatesMark H Weaver2017-08-06
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| * | | | | | | gnu: libtasn1: Add replacement to fix CVE-2017-10790.Mark H Weaver2017-08-06
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Based on commit 01a61d7040b1794f36547b107abce6e967d59f21 by Leo Famulari <leo@famulari.name>. * gnu/packages/patches/libtasn1-CVE-2017-10790.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tls.scm (libtasn1)[replacement]: New field. (libtasn1/fixed): New variable.
| * | | | | | | Merge branch 'master' into core-updatesMarius Bakke2017-08-01
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| * \ \ \ \ \ \ \ Merge branch 'master' into core-updatesMarius Bakke2017-07-28
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| * | | | | | | | | gnu: metabat: Fix boost-related compilation issue.Ben Woodcroft2017-07-23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Reported by Leo Famulari. * gnu/packages/patches/metabat-fix-boost-issue.patch: New file. * gnu/packages/bioinformatics.scm (metabat): Use it. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | | | | | Merge branch 'master' into core-updatesLeo Famulari2017-07-23
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| * | | | | | | | | | gnu: guile-static-stripped: Update to 2.2.Ludovic Courtès2017-07-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/make-bootstrap.scm (%guile-static): Replace GUILE-2.0 with GUILE-2.2. Use "guile-2.2-default-utf8.patch" instead of "guile-default-utf8.patch". * gnu/packages/patches/guile-2.2-default-utf8.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | | | | | | Merge branch 'master' into core-updatesLeo Famulari2017-07-10
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| * | | | | | | | | | | gnu: ghostscript: Make "/CreationDate", "/ModDate" optional, depending on ↵Danny Milosavljevic2017-07-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | environment variable. * gnu/packages/patches/ghostscript-no-header-creationdate.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ghostscript.scm (ghostscript): Use it.
| * | | | | | | | | | | gnu: ghostscript: Make XMP UUID headers optional, depending on environment ↵Danny Milosavljevic2017-07-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | variable. * gnu/packages/patches/ghostscript-no-header-uuid.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ghostscript.scm (ghostscript): Use it.
| * | | | | | | | | | | gnu: ghostscript: Make "/ID" optional, depending on environment variable.Danny Milosavljevic2017-07-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/ghostscript-no-header-id.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it * gnu/packages/ghostscript.scm (ghostscript): Use it.
| * | | | | | | | | | | gnu: groff: Remove timestamps.Danny Milosavljevic2017-07-10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/27593>. * gnu/packages/patches/groff-source-date-epoch.patch: New file. * gnu/local.mk: Add it. * gnu/packages/groff.scm (groff)[source]: Add it.
| * | | | | | | | | | | gnu: wget: Fix compilation with Perl 5.26; skip faulty tests.Ludovic Courtès2017-07-07
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/wget.scm (wget)[arguments]: New field. [source](patches): Add "wget-perl-5.26.patch". * gnu/packages/patches/wget-perl-5.26.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * | | | | | | | | | | gnu: shishi: Build with latest libgcrypt.Leo Famulari2017-06-30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/shishi-fix-libgcrypt-detection.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/kerberos.scm (shishi)[source]: Use it. [inputs]: Use libgcrypt instead of libgcrypt-1.5. [arguments]: Set 'ac_cv_libgcrypt=yes' in #:configure-flags. * gnu/packages/gnupg.scm (libgcrypt-1.5): Remove variable.
| * | | | | | | | | | | Merge branch 'master' into core-updatesLeo Famulari2017-06-29
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| * | | | | | | | | | | | gnu: intltool: Fix a compatibility issue with Perl 5.26.0.Leo Famulari2017-06-29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/intltool-perl-compatibility.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/glib.scm (intltool)[source]: Use it.
| * | | | | | | | | | | | Merge branch 'master' into core-updatesMark H Weaver2017-06-26
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| * \ \ \ \ \ \ \ \ \ \ \ \ Merge branch 'master' into core-updatesMark H Weaver2017-06-20
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| * | | | | | | | | | | | | | gnu: expat: Eliminate graft.Mark H Weaver2017-06-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/xml.scm (expat): Update to 2.2.1. [source]: Remove patch. [replacement]: Remove field. (expat-2.2.1): Remove variable. * gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * | | | | | | | | | | | | | Merge branch 'master' into core-updatesMark H Weaver2017-06-18
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| * | | | | | | | | | | | | | | gnu: libtiff: Fix several bugs related to improper codec usage [security fixes].Leo Famulari2017-06-15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This commit applies the patch to the libtiff package, not the grafting replacement. * gnu/packages/patches/libtiff-tiffgetfield-bugs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libtiff)[source]: Use it.
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