| Commit message (Collapse) | Author | Age |
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* guix/ssh.scm (open-ssh-session): Fall back to GSSAPI if public key
authentication does not work
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/ssh.scm (libssh)[inputs]: Depend on mit-krb5
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* build-aux/build-self.scm (build): Add 'setenv' call for "COLUMNS".
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* gnu/packages/tls.scm (certbot, python-acme): Update to 1.2.0.
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.21.
(linux-libre-5.4-pristine-source): Update hash.
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* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.105.
(linux-libre-4.19-pristine-source): Update hash.
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This removes python and its dependencies from the libevent closure,
reducing it from 180MB to 70MB.
* gnu/packages/libevent.scm (libevent): Add bin output.
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* gnu/packages/javascript.scm (js-selectize)[home-page]: Use HTTPS.
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* gnu/packages/python-science.scm (python-scikit-image)[home-page]: Use HTTPS.
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* gnu/packages/xorg.scm (transset-df)[home-page]: Use HTTPS.
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* gnu/packages/admin.scm (munge): Update to 0.5.14.
[source]: Expand snippet.
[arguments]: Continue installing pkg-config file.
Add new ‘skip-failing-tests’ for the new test suite.
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* gnu/packages/crypto.scm (crypto++): Update to 8.2.0.
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* gnu/packages/crypto.scm (crypto++)[arguments]: Return #t from
‘install-pkg-config’.
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* gnu/packages/crypto.scm (crypto++)[arguments]: Make ‘build-shared’
the main ‘build’ phase. Respect MAKE-FLAGS and PARALLEL-JOB-COUNT.
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* gnu/packages/crypto.scm (crypto++)[arguments]: Use package VERSION.
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* gnu/packages/c.scm (libbytesize): Update to 2.2.
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* gnu/packages/bioinformatics.scm (r-scran): Update to 1.14.6.
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* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.2.
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* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.30.3.
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* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.18.1.
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.38.2.
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* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.2.2.
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* gnu/packages/bioinformatics.scm (r-limma): Update to 3.42.2.
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* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.3.
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* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.1.
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* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.8.
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* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.0.1.
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* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.2.
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* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.32.1.
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* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.2.
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* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.3.
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* gnu/packages/cran.scm (r-biclust): Update to 2.0.2.
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* gnu/packages/cran.scm (r-tolerance): Update to 2.0.0.
[propagated-inputs]: Add r-mass.
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* gnu/packages/cran.scm (r-imager): Update to 0.42.1.
[propagated-inputs]: Remove r-cairo and r-plyr.
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* gnu/packages/cran.scm (r-actigraphy): Update to 1.4.0.
[propagated-inputs]: Remove r-sdmtools.
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* gnu/packages/cran.scm (r-actfrag): Update to 0.1.1.
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* gnu/packages/cran.scm (r-gamlss): Update to 5.1-6.
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* gnu/packages/cran.scm (r-randtoolbox): Update to 1.30.1.
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* gnu/packages/cran.scm (r-showtext): Update to 0.7-1.
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* gnu/packages/cran.scm (r-abcrlda): Update to 1.0.2.
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* gnu/packages/cran.scm (r-bios2cor): Update to 2.1.
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* gnu/packages/cran.scm (r-parameters): Update to 0.5.0.
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* gnu/packages/cran.scm (r-assertr): Update to 2.7.
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* gnu/packages/cran.scm (r-leiden): Update to 0.3.3.
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* gnu/packages/cran.scm (r-styler): Update to 1.3.1.
[propagated-inputs]: Add r-r-cache.
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* gnu/packages/cran.scm (r-lintr): Update to 2.0.1.
[propagated-inputs]: Remove r-stringdist.
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* gnu/packages/cran.scm (r-ggraph): Update to 2.0.1.
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* gnu/packages/cran.scm (r-rmetasim): Update to 3.1.14.
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* gnu/packages/cran.scm (r-sf): Update to 0.8-1.
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* gnu/packages/cran.scm (r-deldir): Update to 0.1-25.
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