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* list-runtime-roots: Canonicalize store items.Ludovic Courtès2017-11-12
| | | | | | | | | | Looking at 'addAdditionalRoots' in libstore/gc.cc, it looks like it should always have been this way. In practice it probably doesn't make much of a difference. * nix/scripts/list-runtime-roots.in (canonicalize-store-item): New procedure. <top level>: Use it.
* list-runtime-roots: Do not use 'lsof'.Ludovic Courtès2017-11-12
| | | | | | | | | This makes things a bit faster (0.8s instead of 1.4s on my laptop). * nix/scripts/list-runtime-roots.in (lsof-roots): Remove. (proc-fd-roots): Return the empty list when 'scandir' returns #f. (referenced-files): New procedure. Use it at the top level.
* doc: Better explain GC roots.Ludovic Courtès2017-11-12
| | | | | | | | | | | Fixes <https://bugs.gnu.org/24194>. Reported by J. Eppler <j.eppler@openmailbox.org>. * doc/guix.texi (Invoking guix-daemon): Add index entries for GC roots. Add xref to "Invoking guix gc". (Invoking guix gc): Add the string "GC roots"; mention /var/guix/gcroots. (Additional Build Options): Add index entries. Better explain --root. (Invoking guix environment): Add xref to "Invoking guix gc".
* gnu: Remove unrar.Leo Famulari2017-11-12
| | | | | | | | | | | This package is abandoned upstream and contains serious bugs: http://seclists.org/oss-sec/2017/q3/329 https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14120 https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14121 https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14122 * gnu/packages/compression.scm (unrar): Remove variable.
* gnu: linux-libre: Change URL to HTTPS.Rutger Helling2017-11-12
| | | | | | * gnu/packages/linux.scm (linux-libre): Change URL to HTTPS. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: mupdf: Unbundle mujs.Efraim Flashner2017-11-12
| | | | | * gnu/packages/pdf.scm (mupdf)[source]: Remove bundled mujs. [inputs]: Add mujs.
* gnu: Add mujs.Efraim Flashner2017-11-12
| | | | * gnu/packages/javascript.scm (mujs): New variable.
* gnu: mupdf: Use https.Efraim Flashner2017-11-12
| | | | | * gnu/packages/pdf.scm (mupdf)[source]: Use https. [home-page]: Same.
* gnu: pdf.scm: Arrange modules alphabetically.Efraim Flashner2017-11-12
| | | | * gnu/packages/pdf.scm: Arrange modules alphabetically.
* gnu: lash: Don't build static libraries.Efraim Flashner2017-11-12
| | | | | * gnu/packages/audio.scm (lash)[arguments]: Add configure-flag to disable static libraries.
* gnu: lash: Don't build lashd.Efraim Flashner2017-11-12
| | | | | | This fixes bug#28174. * gnu/packages/audio.scm (lash)[arguments]: Add phase to skip building lashd.
* gnu: glib-networking: Update to 2.54.1.Kei Kebreau2017-11-12
| | | | * gnu/packages/gnome.scm (glib-networking): Update to 2.54.1.
* gnu: ffmpeg: Reduce the size of the closure.Efraim Flashner2017-11-12
| | | | | * gnu/packages/video.scm (ffmpeg)[arguments]: Add new configure flags to disable the html man pages and the static libraries.
* gnu: mupdf: Use Texinfo for the description.Efraim Flashner2017-11-12
| | | | | * gnu/packages/pdf.scm (mupdf)[description]: Use Texinfo to mark up the description.
* gnu: w3m: Find an editor in the environment.Leo Famulari2017-11-11
| | | | | | * gnu/packages/w3m.scm (w3m)[arguments]: Pass an empty value for --with-editor in #:configure-flags. [source]: Use git-file-name.
* gnu: mupdf: Actually fix CVE-2017-15587.Leo Famulari2017-11-11
| | | | | | The original fix could be removed by an optimizing compiler. * gnu/packages/patches/mupdf-CVE-2017-15587.patch: Revise patch.
* gnu: libusb-compat: Use the same home page as libusb.Tobias Geerinckx-Rice2017-11-12
| | | | * gnu/packages/libusb.scm (libusb-compat)[home-page]: Update.
* gnu: fcgi: Fix typo in description.Tobias Geerinckx-Rice2017-11-12
| | | | * gnu/packages/web.scm (fcgi)[description]: Fix typo.
* gnu: fcgi: Use archived home page fork.Tobias Geerinckx-Rice2017-11-12
| | | | * gnu/packages/web.scm (fcgi)[home-page]: Use archived version.
* gnu: lynx: Use new home page.Tobias Geerinckx-Rice2017-11-12
| | | | * gnu/packages/web-browsers.scm (lynx)[home-page]: Update.
* gnu: perl-mime-types: Update to 2.14.Tobias Geerinckx-Rice2017-11-12
| | | | * gnu/packages/perl.scm (perl-mime-types): Update to 2.14.
* gnu: mailutils: Update to 3.4.Ludovic Courtès2017-11-11
| | | | * gnu/packages/mail.scm (mailutils): Update to 3.4.
* gnu: emacs-emms: Update to 4.4.Ludovic Courtès2017-11-11
| | | | * gnu/packages/emacs.scm (emms): Update to 4.4.
* gnu: nyacc: Update to 0.82.4.Jan Nieuwenhuizen2017-11-11
| | | | * gnu/packages/mes.scm (nyacc): Update to 0.82.4.
* git: Check whether 'clone-init-options' is defined.Ludovic Courtès2017-11-11
| | | | | | | This is a followup to 195f0d05c3f64e17e84b2683a7045a14ec578d61. * guix/git.scm (clone*): Check whether 'clone-init-options' is defined before using it.
* gnu: nvi: Build with support for Unicode text.Leo Famulari2017-11-11
| | | | | * gnu/packages/nvi.scm (nvi)[arguments]: Pass '--enable-widechar' to #:configure-flags.
* tests: Adjust to new unbound-variable error message.Ludovic Courtès2017-11-11
| | | | | | This is a followup to dc856223f5eab57d8a4881782ec0f50abd12afa3. * tests/guix-package.sh: Adjust unbound-variable message regexp.
* tests: Refer to "time@1.8".Ludovic Courtès2017-11-11
| | | | | | This is a followup to dd00e0919fcecd895ff4e5a646cf068f46ff8d12. * tests/guix-build.sh: Refer to "time@1.8".
* download: Work around more bogus HTTP handling in Guile 2.2 <= 2.2.2.Ludovic Courtès2017-11-11
| | | | | | | | Reported by Mark H Weaver <mhw@netris.org> at <https://lists.gnu.org/archive/html/guix-devel/2017-11/msg00190.html>. * guix/build/download.scm (guile-2.2) [write-request-line]: Backport Guile commit 6ad28ae3bc6a6d9e95ab7d70510d12c97673a143.
* gnu: lvm2: Update to 2.02.176.Marius Bakke2017-11-11
| | | | * gnu/packages/linux.scm (lvm2): Update to 2.02.176.
* gnu: libstaroffice: Update to 0.0.5.Marius Bakke2017-11-11
| | | | * gnu/packages/libreoffice.scm (libstaroffice): Update to 0.0.5.
* gnu: libvisio: Update to 0.1.6.Marius Bakke2017-11-11
| | | | | | | * gnu/packages/libreoffice.scm (libvisio): Update to 0.1.6. [source](patches): Remove. * gnu/packages/patches/libvisio-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: libetonyek: Update to 0.1.7.Marius Bakke2017-11-11
| | | | | | | | | * gnu/packages/libreoffice.scm (libetonyek): Update to 0.1.7. [source](patches): Remove. [arguments]<#:phases>: Remove. [native-inputs]: Remove AUTOCONF and AUTOMAKE. * gnu/packages/patches/libetonyek-build-with-mdds-1.2.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: libreoffice: Update to 5.3.7.2 and enable GTK3.Rutger Helling2017-11-11
| | | | | | | | | * gnu/packages/libreoffice.scm (libreoffice): Update to 5.3.7.2 [source]: Change URL to HTTPS. [inputs]: Add gtk+. [configure-flags]: Remove "--disable-gtk3". Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: python2-rpython: Update to 0.2.1.Alex Vong2017-11-11
| | | | | | * gnu/packages/python.scm (python2-rpython): Update to 0.2.1. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: python-sympy: Update to 1.1.1.Alex Vong2017-11-11
| | | | | | * gnu/packages/python.scm (python-sympy, python2-sympy): Update to 1.1.1. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: python-sqlparse: Fix syntax error.Marius Bakke2017-11-11
| | | | | | This is a follow-up to commit 8d688cd27f267f4d143d0f20ed3c352188151302. * gnu/packages/python.scm (python-sqlparse)[arguments]: Add missing lambda.
* gnu: python-sqlparse: Update to 0.2.4.Tobias Geerinckx-Rice2017-11-11
| | | | | | * gnu/packages/python.scm (python-sqlparse, python2-sqlparse): Update to 0.2.4. [arguments]: Don't invoke ‘2to3’.
* install: Fix typo.Tobias Geerinckx-Rice2017-11-11
| | | | * gnu/system/install.scm (installation-os): Fix typo in comment.
* gnu: cyrus-sasl: Use new home page.Tobias Geerinckx-Rice2017-11-11
| | | | * gnu/packages/cyrus-sasl.scm (cyrus-sasl)[home-page]: Update.
* gnu: methylkit: Use new home page.Tobias Geerinckx-Rice2017-11-11
| | | | * gnu/packages/bioinformatics.scm (methylkit)[home-page]: Update.
* gnu: vsearch: Update to 2.6.0.Ben Woodcroft2017-11-11
| | | | * gnu/packages/bioinformatics.scm (vsearch): Update to 2.6.0.
* download: Work around bogus HTTP handling in Guile 2.2 <= 2.2.2.Ludovic Courtès2017-11-10
| | | | | | | | Reported by Konrad Hinsen <konrad.hinsen@fastmail.net> at <https://lists.gnu.org/archive/html/guix-devel/2017-11/msg00070.html>. * guix/build/download.scm (write-request-line) [guile-2.2]: New procedure.
* gnu: webkitgtk: Update to 2.18.3 [fixes CVE-2017-{13788,13798,13803}].Leo Famulari2017-11-10
| | | | * gnu/packages/webkit.scm (webkitgtk): Update to 2.18.3.
* gnu: qemu: Fix CVE-2017-{15038,15268,15289}.Leo Famulari2017-11-10
| | | | | | | | * gnu/packages/patches/qemu-CVE-2017-15038.patch, gnu/packages/patches/qemu-CVE-2017-15268.patch, gnu/packages/patches/qemu-CVE-2017-15289.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them.
* gnu: Fix hunspell-dict-en-* dictionary installation.Kei Kebreau2017-11-10
| | | | | * gnu/packages/aspell.scm (aspell-word-list)[arguments]: Install the .dic file for all hunspell dictionaries.
* gnu: cutadapt: Update to 1.14.Ricardo Wurmus2017-11-10
| | | | * gnu/packages/bioinformatics.scm (cutadapt): Update to 1.14.
* gnu: synergy: Fix minor problems with the package definitions.Ricardo Wurmus2017-11-10
| | | | | | | * gnu/packages/synergy.scm (synergy)[source]: Return #t in the snippet. [arguments]: Let build phases return #t; fix typo in comment. [home-page]: Change to redirection target. [description]: Fix typo.
* gnu: password-store: Install passmenu script.Jelle Licht2017-11-10
| | | | | | | * gnu/packages/password-utils (password-store) [inputs]: Add dmenu and xdotool. [arguments]<#:phases>['patch-passmenu-path']: New phase. [arguments]<#:phases>['install-passmenu']: New phase.
* gnu: Add Epson escpr printer driver.Diego Nicola Barbato2017-11-10
| | | | | | * gnu/packages/cups.scm (escpr): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>