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* gnu: r-caret: Update to 6.0-76.Ricardo Wurmus2017-04-22
| | | | | * gnu/packages/statistics.scm (r-caret): Update to 6.0-76. [propagated-inputs]: Add r-lattice and r-nlme.
* gnu: r-lme4: Update to 1.1-13.Ricardo Wurmus2017-04-22
| | | | | * gnu/packages/statistics.scm (r-lme4): Update to 1.1-13. [propagated-inputs]: Add r-lattice and r-matrix.
* gnu: r-quantreg: Update to 5.33.Ricardo Wurmus2017-04-22
| | | | | * gnu/packages/statistics.scm (r-quantreg): Update to 5.33. [propagated-inputs]: Add r-matrix.
* gnu: r-compquadform: Update to 1.4.3.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-compquadform): Update to 1.4.3.
* gnu: r-zoo: Update to 1.8-0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-zoo): Update to 1.8-0.
* gnu: r-matrixstats: Update to 0.52.2.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-matrixstats): Update to 0.52.2.
* gnu: r-r-rsp: Update to 0.41.0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-r-rsp): Update to 0.41.0.
* gnu: r-rtsne: Update to 0.13.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-rtsne): Update to 0.13.
* gnu: r-rcpparmadillo: Update to 0.7.800.2.0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.800.2.0.
* gnu: r-memoise: Update to 1.1.0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-memoise): Update to 1.1.0.
* gnu: r-markdown: Update to 0.8.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-markdown): Update to 0.8.
* gnu: r-assertthat: Update to 0.2.0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-assertthat): Update to 0.2.0.
* gnu: r-rpart: Update to 4.1-11.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-rpart): Update to 4.1-11.
* gnu: r-mass: Update to 7.3-47.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-mass): Update to 7.3-47.
* gnu: r-boot: Update to 1.3-19.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/statistics.scm (r-boot): Update to 1.3-19.
* gnu: r-curl: Update to 2.5.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/web.scm (r-curl): Update to 2.5.
* gnu: r-seqminer: Update to 5.9.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/bioinformatics.scm (r-seqminer): Update to 5.9.
* gnu: Add nss-pam-ldapd.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/openldap.scm (nss-pam-ldapd): New variable.
* gnu: Add the Hurd.Manolis Ragkousis2017-04-22
| | | | | | * gnu/packages/hurd.scm (hurd): New variable. * gnu/packages/patches/hurd-fix-eth-multiplexer-dependency.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: hurd: Add hurd-source-url procedure.Manolis Ragkousis2017-04-22
| | | | | * gnu/packages/hurd.scm (hurd-source-url): New procedure. (hurd-headers)[source]: Adjust accordingly.
* system: Rename operating-system-parameters-file to ↵Danny Milosavljevic2017-04-22
| | | | | | | | operating-system-boot-parameters-file. * gnu/system.scm (operating-system-parameters-file): Rename to ... (operating-system-boot-parameters-file): ... this. (operating-system-directory-base-entries): Adapt call site.
* system: Rename operating-system-kernel-arguments to ↵Danny Milosavljevic2017-04-22
| | | | | | | | | | | | operating-system-user-kernel-arguments. * gnu/system.scm (operating-system-kernel-arguments): Rename to ... (operating-system-user-kernel-arguments): ... this. (<operating-system>): Adapt accordingly. (operating-system-bootcfg): Adapt accordingly. (operating-system-parameters-file): Adapt accordingly. * gnu/system/vm.scm (system-qemu-image/shared-store-script): Adapt accordingly.
* gnu: weechat: Update to 1.7.1.Tobias Geerinckx-Rice2017-04-22
| | | | | * gnu/packages/irc.scm (weechat): Update to 1.7.1. [source, home-page]: Use HTTPS.
* gnu: weechat: Mention ‘IRC’.Tobias Geerinckx-Rice2017-04-22
| | | | | * gnu/packages/irc.scm (weechat)[description]: Mention the search term ‘IRC’, split into paragraphs, and other small tweaks.
* gnu: hyperrogue: Update to 9.4g.Kei Kebreau2017-04-22
| | | | * gnu/packages/games.scm (hyperrogue): Update to 9.4g.
* gnu: gnuplot: Update to 5.0.6.Kei Kebreau2017-04-22
| | | | * gnu/packages/maths.scm (gnuplot): Update to 5.0.6.
* cache: Work around 'time-monotonic' bug in Guile 2.2.2.Ludovic Courtès2017-04-22
| | | | | | | * guix/cache.scm (time-monotonic) [guile-2.2]: New variable. * tests/cache.scm (time-monotonic) [guile-2.2]: Likewise. * guix/build/download.scm (time-monotonic) [guile-2.2]: Adjust comment: it's a 2.2.2 bug.
* derivations: Adjust builder encoding test.Ludovic Courtès2017-04-22
| | | | | | | This is a followup to 9231ef12f2a595b8f1e677dbe50cc499555302b6. * tests/derivations.scm ("build-expression->derivation and builder encoding"): Set '%default-port-encoding' to "UTF-8".
* gnu: xf86-video-nouveau: Update to 1.0.15.Marius Bakke2017-04-22
| | | | | * gnu/packages/xorg.scm (xf86-video-nouveau): Update to 1.0.15. [home-page]: Use HTTPS.
* gnu: emacs: Update to 25.2.Marius Bakke2017-04-22
| | | | | * gnu/packages/emacs.scm (emacs, emacs-minimal, emacs-no-x, emacs-no-x-toolkit): Update to 25.2.
* gnu: xdg-utils: Update to 1.1.1.Marius Bakke2017-04-22
| | | | | | | | | * gnu/packages/freedesktop.scm (xdg-utils): Update to 1.1.1. [source]: Adjust file name. [native-inputs]: Add DOCBOOK-XSL, DOCBOOK-XML-4.1.2, LIBXSLT, W3M and XMLTO. [arguments]<#:phases>: Add 'patch-hardcoded-paths' and 'locate-catalog-files' phases. New parameter. [home-page]: Update to new home.
* gnu: linux-libre: Update to 4.10.12.Mark H Weaver2017-04-21
| | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 4.10.12. (%linux-libre-hash): Update hash.
* gnu: linux-libre@4.9: Update to 4.9.24.Mark H Weaver2017-04-21
| | | | * gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.24.
* gnu: linux-libre@4.4: Update to 4.4.63.Mark H Weaver2017-04-21
| | | | * gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.63.
* gnu: Add guile2.2-ssh.Ludovic Courtès2017-04-22
| | | | * gnu/packages/ssh.scm (guile2.2-ssh): New variable.
* download: Work around Guile 2.2 bug with 'time-monotonic' objects.Ludovic Courtès2017-04-22
| | | | * guix/build/download.scm (time-monotonic) [guile-2.2]: New variable.
* gnu: Add policycoreutils.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (policycoreutils): New variable.
* gnu: Add python-setools.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (python-setools): New variable.
* gnu: Add python-ipy.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/networking.scm (python-ipy): New variable.
* gnu: Add python-sepolgen.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (python-sepolgen): New variable.
* gnu: Add secilc.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (secilc): New variable.
* gnu: Add libsemanage.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (libsemanage): New variable.
* gnu: Add libselinux.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (libselinux): New variable.
* gnu: Add checkpolicy.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/selinux.scm (checkpolicy): New variable.
* gnu: Add libsepol.Ricardo Wurmus2017-04-22
| | | | | * gnu/packages/selinux.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu: ibus-libpinyin: Update to 1.9.0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/ibus.scm (ibus-libpinyin): Update to 1.9.0.
* gnu: libpinyin: Adjust indentation.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/ibus.scm (libpinyin)[arguments]: Adjust indentation.
* gnu: libpinyin: Update to 2.0.0.Ricardo Wurmus2017-04-22
| | | | * gnu/packages/ibus.scm (libpinyin): Update to 2.0.0.
* gnu: Remove unused patches.Leo Famulari2017-04-21
| | | | | | | | | | | | | | * gnu/packages/patches/gcc-libiberty-printf-decl.patch, gnu/packages/patches/grub-CVE-2015-8370.patch, gnu/packages/patches/grub-freetype.patch, gnu/packages/patches/grub-gets-undeclared.patch, gnu/packages/patches/guile-arm-fixes.patch, gnu/packages/patches/mplayer2-theora-fix.patch, gnu/packages/patches/soprano-find-clucene.patch, gnu/packages/patches/util-linux-CVE-2017-2616.patch, gnu/packages/patches/xf86-video-intel-compat-api.patch, gnu/packages/patches/xf86-video-intel-glibc-2.20.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
* tests: Adjust to the addition of a new Coreutils version.Ludovic Courtès2017-04-21
| | | | | | * tests/scripts-build.scm ("options->transformation, with-input"): Use 'specification->package' rather than refer to Coreutils by its variable. This is a followup to e162050dfc0dee708a7ac5bfcf37d2afd6081604.
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