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* gnu: r-vim: Update to 5.1.1.Ricardo Wurmus2020-03-12
| | | | * gnu/packages/cran.scm (r-vim): Update to 5.1.1.
* gnu: r-vctrs: Update to 0.2.4.Ricardo Wurmus2020-03-12
| | | | | * gnu/packages/cran.scm (r-vctrs): Update to 0.2.4. [native-inputs]: Add r-knitr.
* gnu: r-cicero: Update to 1.4.4.Ricardo Wurmus2020-03-12
| | | | | * gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.4. [native-inputs]: Add r-knitr.
* gnu: r-ggcyto: Update to 1.14.1.Ricardo Wurmus2020-03-12
| | | | | * gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.14.1. [native-inputs]: Add r-knitr.
* gnu: r-mlinterfaces: Update to 1.66.5.Ricardo Wurmus2020-03-12
| | | | * gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.5.
* gnu: r-qtl: Update to 1.46-2.Ricardo Wurmus2020-03-12
| | | | * gnu/packages/bioinformatics.scm (r-qtl): Update to 1.46-2.
* gnu: Add hyperledger-iroha.base-for-series-3149Pierre Neidhardt2020-03-12
| | | | | | This package was co-authored with Efraim Flashner <efraim@flashner.co.il> * gnu/packages/hyperledger.scm (hyperledger-iroha): New variable.
* gnu: Add boost-1.69.Efraim Flashner2020-03-12
| | | | * gnu/packages/boost.scm (boost-1.69): New hidden package.
* gnu: Add hyperledger-iroha-ed25519.Pierre Neidhardt2020-03-12
| | | | * gnu/packages/hyperledger.scm (hyperledger-iroha-ed25519): New variable.
* gnu: grpc: Build shared libraries.Efraim Flashner2020-03-12
| | | | | | | | * gnu/packages/machine-learning.scm (grpc)[outputs]: Add static. [arguments]: Copy configure-flags from cmake-build-system. Add custom phases 'configure-shared, 'install-shared-libraries and 'move-static-libs to build shared libs and move static libs to their own output. (tensorflow)[native-inputs]: Add grpc:static.
* gnu: python2-jupyter-console: Build with python2.Efraim Flashner2020-03-12
| | | | | * gnu/packages/python-xyz.scm (python2-jupyter-console)[arguments]: Add python keyword, set to python-2.
* gnu: python-jupyter-console: Specify python2 variant.Efraim Flashner2020-03-12
| | | | | * gnu/packages/python-xyz.scm (python-jupyter-console)[properties]: New field. Specify python2-jupyter-console as python2 variant.
* services: mumi-service-type: Update to latest version of mumi.Ricardo Wurmus2020-03-12
| | | | | * gnu/services/web.scm (%mumi-activation): Create /var/mumi/db. (mumi-shepherd-services): Add service for mumi worker.
* gnu: mumi: Update to 0.0.0-7.6653e2d.Ricardo Wurmus2020-03-12
| | | | | * gnu/packages/mail.scm (mumi): Update to 0.0.0-7.6653e2d. [inputs]: Add guile-sqlite3.
* gnu: r-cairo: Update to 1.5-11.Ricardo Wurmus2020-03-12
| | | | * gnu/packages/statistics.scm (r-cairo): Update to 1.5-11.
* gnu: dune-istl: Build with suitesparseFelix Gruber2020-03-12
| | | | | | | * gnu/packages/maths.scm (dune-istl)[inputs]: Add suitesparse to build additional solvers in dune-istl. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add dune-subgridFelix Gruber2020-03-12
| | | | | | * gnu/packages/maths.scm (dune-subgrid): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add dune-uggrid.Felix Gruber2020-03-12
| | | | | | | | | | | * gnu/packages/maths.scm (dune-uggrid): New variable. (dune-grid)[propagated-inputs]: Add dune-uggrid dependency, so that the UGGrid class in dune-grid can be used by packages that have dune-grid as input. (dune-functions)[arguments]: Enable tests that previously weren't built as they require dune-uggrid. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: dune-*: set up MPI for testsFelix Gruber2020-03-12
| | | | | | | | * gnu/packages/maths.scm (dune-common, dune-grid, dune-istl, dune-alugrid): [arguments]: correctly set up MPI instead of disabling tests that require MPI. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* inferior: Distinguish inferior exceptions.Ludovic Courtès2020-03-12
| | | | | | | | | | | | This avoids ambiguities when looking at a backtrace where the exception was actually thrown by an inferior in a very different context. * guix/inferior.scm (&inferior-exception): New condition type. (read-repl-response): Add optional 'inferior' parameter. Raise '&inferior-exception' instead of rethrowing to KEY when receiving an 'exception' message. (read-inferior-response): Pass INFERIOR to 'read-repl-response'. * tests/inferior.scm ("&inferior-exception"): New test.
* import: cpan: Gracefully handle missing projects.Ludovic Courtès2020-03-12
| | | | * guix/import/cpan.scm (cpan-fetch): Check whether 'json-fetch' returns #f.
* import: utils: Remove 'assoc-ref*'.Ludovic Courtès2020-03-12
| | | | * guix/import/utils.scm (assoc-ref*): Remove.
* import: pypi: Rewrite to use 'define-json-mapping'.Ludovic Courtès2020-03-12
| | | | | | | | | | * guix/import/pypi.scm (non-empty-string-or-false): New procedure. (<pypi-project>, <project-info>, <distribution>): New record types. (pypi-fetch): Call 'json->pypi-project'. (latest-source-release, latest-wheel-release): Use the new record accessors instead of 'assoc-ref*'. (pypi->guix-package, latest-release): Likewise. * tests/pypi.scm (test-json): Add mandatory fields.
* gnu: guile-next: Enable JIT on ARMv7.Ludovic Courtès2020-03-12
| | | | | | JIT support on ARMv7 is fixed by "guile-3.0-crash.patch". * gnu/packages/guile.scm (guile-3.0)[arguments]: Remove.
* gnu: Add virtualpg.Guillaume Le Vaillant2020-03-12
| | | | * gnu/packages/geo.scm (virtualpg): New variable.
* gnu: jgmenu: Update to 4.1.0.Guillaume Le Vaillant2020-03-12
| | | | * gnu/packages/xdisorg.scm (jgmenu): Update to 4.1.0.
* gnu: udiskie: Update to 2.1.0.Guillaume Le Vaillant2020-03-12
| | | | * gnu/packages/freedesktop.scm (udiskie): Update to 2.1.0.
* gnu: txr: Update to 233.Guillaume Le Vaillant2020-03-12
| | | | * gnu/packages/lisp.scm (txr): Update to 233.
* doc: Fix description for "guix package -A".Danny Milosavljevic2020-03-12
| | | | * doc/guix.texi (Invoking guix package): Fix description for "guix package -A".
* gnu: python2-ipython: Fix build.Efraim Flashner2020-03-12
| | | | | * gnu/packages/python-xyz.scm (python2-ipython)[arguments]: Adjust skipped tests.
* gnu: xlockmore: Update to 5.62.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/xdisorg.scm (xlockmore): Update to 5.62.
* gnu: xlockmore: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/xdisorg.scm (xlockmore)[home-page]: Use HTTPS.
* gnu: mame: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/emulators.scm (mame)[home-page]: Use HTTPS.
* gnu: dosbox: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/emulators.scm (dosbox)[home-page]: Use HTTPS.
* gnu: Add gitless.Tobias Geerinckx-Rice2020-03-12
| | | | | | * gnu/packages/version-control.scm (gitless): New public variable. Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: faust: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/audio.scm (faust)[home-page]: Use HTTPS.
* gnu: rsound: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/audio.scm (rsound)[home-page]: Use HTTPS.
* gnu: libgme: Update to 0.6.3.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/music.scm (libgme): Update to 0.6.3.
* gnu: xmobar: Update to 0.33.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/wm.scm (xmobar): Update to 0.33.
* gnu: gptfdisk: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/disk.scm (gptfdisk)[home-page]: Use HTTPS.
* gnu: ephoto: Update source and home page URIs.Tobias Geerinckx-Rice2020-03-12
| | | | | * gnu/packages/enlightenment.scm (ephoto)[source]: Remove dead URI. [home-page]: Follow (HTTPS) redirection.
* gnu: s6: Update to 2.9.1.0.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/skarnet.scm (s6): Update to 2.9.1.0.
* gnu: simple-scan: Update to 3.36.0.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/gnome.scm (simple-scan): Update to 3.36.0.
* gnu: picprog: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/embedded.scm (picprog)[home-page]: Use HTTPS.
* gnu: java-snappy: Don't use unstable tarball.Tobias Geerinckx-Rice2020-03-12
| | | | | | * gnu/packages/java-compression.scm (java-snappy)[source]: Use GIT-FETCH and GIT-FILE-NAME. [arguments]: Add ‘make-git-checkout-writable’ phase.
* gnu: java-snappy: Update to 1.1.7.3.Tobias Geerinckx-Rice2020-03-12
| | | | * gnu/packages/java-compression.scm (java-snappy): Update to 1.1.7.3.
* gnu: Borg: Update to 1.1.11.base-for-series-3140Leo Famulari2020-03-11
| | | | * gnu/packages/backup.scm (borg): Update to 1.1.11.
* gnu: xxHash: Update to 0.7.3.Leo Famulari2020-03-11
| | | | * gnu/packages/digest.scm (xxhash): Update to 0.7.3.
* gnu: Remove year range from copyright header.Marius Bakke2020-03-11
| | | | | * gnu/packages/python-xyz.scm: List years explicitly instead of range in copyright line.
* gnu: Remove duplicate copyright line.Marius Bakke2020-03-11
| | | | * gnu/packages/python-xyz.scm: Remove duplicate copyright.
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