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* gnu: r-writexl: Update to 1.3.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-writexl): Update to 1.3.
* gnu: r-sjlabelled: Update to 1.1.4.Ricardo Wurmus2020-05-12
| | | | | | * gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.4. [propagated-inputs]: Remove r-haven. [native-inputs]: Add r-knitr.
* gnu: r-officer: Update to 0.3.9.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-officer): Update to 0.3.9.
* gnu: r-ggpubr: Update to 0.3.0.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/cran.scm (r-ggpubr): Update to 0.3.0. [propagated-inputs]: Add r-rstatix and r-tibble.
* gnu: Add r-rstatix.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-rstatix): New variable.
* gnu: r-renv: Update to 0.10.0.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/cran.scm (r-renv): Update to 0.10.0. [native-inputs]: Add r-knitr.
* gnu: r-openxlsx: Update to 4.1.5.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/cran.scm (r-openxlsx): Update to 4.1.5. [native-inputs]: Add r-knitr.
* gnu: r-vim: Update to 6.0.0.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/cran.scm (r-vim): Update to 6.0.0. [native-inputs]: Add r-knitr.
* gnu: r-pillar: Update to 1.4.4.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-pillar): Update to 1.4.4.
* gnu: r-vctrs: Update to 0.3.0.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-vctrs): Update to 0.3.0.
* gnu: r-recipes: Update to 0.1.12.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-recipes): Update to 0.1.12.
* gnu: r-extremes: Update to 2.0-12.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-extremes): Update to 2.0-12.
* gnu: r-circlize: Update to 0.4.9.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/cran.scm (r-circlize): Update to 0.4.9. [native-inputs]: Add r-knitr.
* gnu: r-pkgbuild: Update to 1.0.8.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.8.
* gnu: r-ps: Update to 1.3.3.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-ps): Update to 1.3.3.
* gnu: r-modelr: Update to 0.1.7.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-modelr): Update to 0.1.7.
* gnu: r-scales: Update to 1.1.1.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/cran.scm (r-scales): Update to 1.1.1.
* gnu: epiphany: Enable tests.Leo Prikler2020-05-12
| | | | | | | | * gnu/packages/gnome.scm (epiphany)[arguments]<#:tests?>: Drop it. <#:phases>: Add disable-failing-tests and pre-check. [inputs]: Add xorg-server-for-tests. Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
* gnu: epiphany: Update to 3.34.4.Leo Prikler2020-05-12
| | | | | | * gnu/packages/gnome.scm (epiphany): Update to 3.34.4. Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
* gnu: guile-dsv: Update to 0.3.0.Alex Sassmannshausen2020-05-12
| | | | * gnu/packages/guile-xyz.scm (guile-dsv): Update to 0.3.0.
* gnu: Add julia-compat.base-for-series-3932nixo2020-05-12
| | | | | | | * gnu/packages/julia-xyz.scm: New file. * gnu/local.mk: Add packages/julia-xyz.scm to it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: julia: Update to 1.4.1.nixo2020-05-12
| | | | | | | * gnu/packages/julia.scm (julia): Update to 1.4.1. * gnu/packages/julia.scm (julia-llvm): Update to 8. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add libwhich.nixo2020-05-12
| | | | | | * gnu/packages/julia.scm (libwhich): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: julia: Fix patch.nixo2020-05-12
| | | | | | | | | * gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch: replaced with actual patch. It was a patch creating the patch. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: julia: Fix patch URL.nixo2020-05-12
| | | | | | * gnu/packages/julia.scm (julia-patch-url): Add ".patch". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: cuirass: Update to 0.0.1-30.9559fd1.Ricardo Wurmus2020-05-12
| | | | * gnu/packages/ci.scm (cuirass): Update to 0.0.1-30.9559fd1.
* gnu: mumi: Update to 0.0.1-1.75d34d4.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/mail.scm (mumi): Update to 0.0.1-1.75d34d4. [inputs]: Remove guile-debbugs and gnutls; replace guile-2.2 with guile-3.0.
* gnu: guile-debbugs: Build with Guile 3.0.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/guile-xyz.scm (guile-debbugs)[native-inputs]: Replace guile-2.2 with guile-3.0.
* gnu: guile-pfds: Remove obsolete build phase.Ricardo Wurmus2020-05-12
| | | | | * gnu/packages/guile-xyz.scm (guile-pfds)[arguments]: Remove phase "work-around-guile-bug".
* gnu: terminology: Update to 1.7.0.Efraim Flashner2020-05-12
| | | | * gnu/packages/enlightenment.scm (terminology): Update to 1.7.0.
* gnu: evisum: Update to 0.4.1.Efraim Flashner2020-05-12
| | | | * gnu/packages/enlightenment.scm (evisum): Update to 0.4.1.
* gnu: guile-redis: Build with Guile 3.0.base-for-series-3926Ricardo Wurmus2020-05-12
| | | | | | * gnu/packages/guile-xyz.scm (guile-redis)[native-inputs]: Replace guile-2.2 with guile-3.0. (guile2.2-redis): New variable.
* gnu: guile-lens: Build with Guile 3.0.Ricardo Wurmus2020-05-12
| | | | | | * gnu/packages/guile-xyz.scm (guile-lens)[native-inputs]: Replace guile-2.2 with guile-3.0. (guile2.2-lens): New variable.
* gnu: guile-webutils: Build with Guile 3.0.Ricardo Wurmus2020-05-12
| | | | | | | * gnu/packages/guile-xyz.scm (guile-webutils)[source]: Add snippet to patch configure.ac. [inputs]: Replace guile-2.2 with guile-3.0. (guile2.2-webutils): New variable.
* gnu: guile-ncurses: Build with Guile 3.0.Ricardo Wurmus2020-05-12
| | | | | | | * gnu/packages/guile-xyz.scm (guile-ncurses)[inputs]: Replace guile-2.2 with guile-3.0. (guile3.0-ncurses): Deprecate in favor of guile-ncurses. (guile2.2-ncurses): New variable.
* gnu: guile-sjson: Build with Guile 3.0.Ricardo Wurmus2020-05-12
| | | | | | | * gnu/packages/guile-xyz.scm (guile-sjson)[source]: Add snippet to patch configure file. [inputs]: Replace guile-2.2 with guile-3.0. (guile2.2-sjson): New variable.
* gnu: Remove openimageio@1.7.Marius Bakke2020-05-11
| | | | * gnu/packages/graphics.scm (openimageio-1.7): Remove variable.
* gnu: Remove boost@1.69.Marius Bakke2020-05-11
| | | | * gnu/packages/boost.scm (boost-1.69): Remove variable.
* gnu: guix: Update to bdc801e1cf.Marius Bakke2020-05-11
| | | | * gnu/packages/package-management.scm (guix): Update to 1.1.0-4.bdc801e.
* news: Add entry for 'guix graph --path'.Ludovic Courtès2020-05-11
| | | | * etc/news.scm: Add entry.
* guix graph: Add '--path'.Ludovic Courtès2020-05-11
| | | | | | | | | * guix/scripts/graph.scm (display-path): New procedure. (%options, show-help): Add '--path'. (guix-graph): Handle it. * tests/guix-graph.sh: Add tests. * doc/guix.texi (Invoking guix graph): Document it. (Invoking guix size): Mention it.
* graph: Add 'shortest-path'.Ludovic Courtès2020-05-11
| | | | | | | * guix/graph.scm (shortest-path): New procedure. * tests/graph.scm ("shortest-path, packages + derivations") ("shortest-path, reverse packages") ("shortest-path, references"): New tests.
* graph: reference/referrer node types work with graph traversal.Ludovic Courtès2020-05-11
| | | | | | | | | | | | The graph traversal procedures in (guix graph) assume that nodes can be compared with 'eq?', which was not the case for nodes of %REFERENCE-NODE-TYPE and %REFERRER-NODE-TYPE (strings). * guix/scripts/graph.scm (intern): New procedure. (ensure-store-items, references*) (%reference-node-type, non-derivation-referrers) (%referrer-node-type): Use it on all store items. * tests/graph.scm ("node-transitive-edges, references"): New test.
* doc: Mention xdot.Ludovic Courtès2020-05-11
| | | | | | | * doc/guix.texi (Invoking guix graph): Mention xdot. Remove a couple of "| dot -Tpdf" in examples and add "| xdot". (Invoking guix system): Likewise. (Preparing to Use the Bootstrap Binaries): Likewise.
* tests: Test 'guix show' with multiple packages.Ludovic Courtès2020-05-11
| | | | * tests/guix-package-aliases.sh: Test 'guix show' with multiple packages.
* guix package, show: Support multiple queries.zimoun2020-05-11
| | | | | | | * guix/scripts/package.scm (process-query): Show multiple queries. * guix/scripts/show.scm (guix-show): Reverse to display in order. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: waylandpp: Update to 0.2.7.Marius Bakke2020-05-11
| | | | * gnu/packages/freedesktop.scm (waylandpp): Update to 0.2.7.
* gnu: wl-clipboard: Update to 2.0.0.Marius Bakke2020-05-11
| | | | | * gnu/packages/xdisorg.scm (wl-clipboard): Update to 2.0.0. [source](uri): Add "v" prefix in tag reference.
* gnu: capnproto: Update to 0.8.0.Marius Bakke2020-05-11
| | | | * gnu/packages/serialization.scm (capnproto): Update to 0.8.0.
* gnu: rng-tools: Update to 6.10.Marius Bakke2020-05-11
| | | | | | * gnu/packages/linux.scm (rng-tools): Update to 6.10. [arguments]: Add --without-rtlsdr in #:configure-flags. [inputs]: Add OPENSSL, which is no longer optional.
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