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* gnu: umockdev: Fix test.Brice Waegeneire2020-05-01
| | | | | | | | * gnu/packages/check.scm (umockdev)[inputs]: Remove 'gobject-introspection'. [arguments]: Replace phase 'skip-broken-test' by 'fix-test'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add apt-mirror.Jean-Baptiste Note2020-05-01
| | | | | | * gnu/packages/debian.scm (apt-mirror): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: balsa: Update to 2.6.0.Rene Saavedra2020-05-01
| | | | | | | * gnu/packages/mail.scm (balsa): Update to 2.6.0. [inputs]: Replace gmime-2.6 with gmime; add libical and libsecret. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* profiles: Mark manual database as non-substitutable.Ludovic Courtès2020-05-01
| | | | | | | Fixes <https://bugs.gnu.org/40381>. Reported by pkill9 <pkill9@runbox.com>. * guix/profiles.scm (manual-database): Pass #:substitutable? #f.
* gnu: emacs-toml-mode: Fix syntax error in description.Marius Bakke2020-04-30
| | | | | * gnu/packages/emacs-xyz.scm (emacs-toml-mode)[description]: Replace usage of @acronym with @dfn to work around a Guile Texinfo limitation.
* doc: Bootloader Configuration: Fix an obsolete example.Leo Famulari2020-04-30
| | | | | | | Reported by rawmat on #guix. * doc/guix.texi (Bootloader Configuration): Replace 'grub-configuration' with 'bootloader-configuration'.
* gnu: diffoscope: Update to 143.Vagrant Cascadian2020-04-30
| | | | | | | * gnu/packages/diffoscope (diffoscope): Update to 143. [native-inputs]: Add openssl and python-h5py. [arguments] Add openssl to add-known-tools phase. [arguments] Remove hdf5 from add-known-tools phase, added upstream.
* gnu: MPD: Update to 0.21.23.Leo Famulari2020-04-30
| | | | * gnu/packages/mpd.scm (mpd): Update to 0.21.23.
* gnu: libntlm: Update to 1.6 [fixes CVE-2019-17455].Simon Josefsson2020-04-30
| | | | | | * gnu/packages/gsasl.scm (libntlm): Update to 1.6. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: sbcl-osicat: Fix library path.Pierre Neidhardt2020-04-30
| | | | | | * gnu/packages/lisp-xyz.scm (sbcl-osicat)[arguments]: Replace 'cleanup phase to preserve the location of libosicat.so so that it can be found when loading the system.
* gnu: r-vgam: Update to 1.1-3.Ricardo Wurmus2020-04-30
| | | | | | * gnu/packages/statistics.scm (r-vgam): Update to 1.1-3. [inputs]: Move gfortran from here... [native-inputs]: ...to here.
* gnu: r-rcpparmadillo: Update to 0.9.870.2.0.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.870.2.0.
* gnu: r-spatial: Update to 7.3-12.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-spatial): Update to 7.3-12.
* gnu: r-nnet: Update to 7.3-14.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-nnet): Update to 7.3-14.
* gnu: r-kernsmooth: Update to 2.23-17.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-17.
* gnu: r-foreign: Update to 0.8-79.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-foreign): Update to 0.8-79.
* gnu: r-class: Update to 7.3-17.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-class): Update to 7.3-17.
* gnu: r-mass: Update to 7.3-51.6.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-mass): Update to 7.3-51.6.
* gnu: r-boot: Update to 1.3-25.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/statistics.scm (r-boot): Update to 1.3-25.
* gnu: r-kutils: Update to 1.70.Ricardo Wurmus2020-04-30
| | | | | * gnu/packages/cran.scm (r-kutils): Update to 1.70. [propagated-inputs]: Remove r-lavaan.
* gnu: r-univoutl: Update to 0.2.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-univoutl): Update to 0.2.
* gnu: r-graphlayouts: Update to 0.7.0.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-graphlayouts): Update to 0.7.0.
* gnu: r-systemfonts: Update to 0.2.1.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-systemfonts): Update to 0.2.1.
* gnu: r-ggfortify: Update to 0.4.10.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-ggfortify): Update to 0.4.10.
* gnu: r-dalex: Update to 1.2.1.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-dalex): Update to 1.2.1.
* gnu: r-arm: Update to 1.11-1.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-arm): Update to 1.11-1.
* gnu: r-usethis: Update to 1.6.1.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-usethis): Update to 1.6.1.
* gnu: r-rootsolve: Update to 1.8.2.1.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.1.
* gnu: r-proxy: Update to 0.4-24.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-proxy): Update to 0.4-24.
* gnu: r-pkgbuild: Update to 1.0.7.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.7.
* gnu: Add miniasm.Roel Janssen2020-04-30
| | | | * gnu/packages/bioinformatics.scm (miniasm): New variable.
* gnu: Add one more missing module import.Ricardo Wurmus2020-04-30
| | | | | | This is a follow-up to commit 61fc72d3ac949d0c65690ee25bb1daf01f39bb42. * gnu/packages/backup.scm: Add missing import of (gnu packages protobuf).
* gnu: Add missing module import.Ricardo Wurmus2020-04-30
| | | | | | This is a follow-up to commit 61fc72d3ac949d0c65690ee25bb1daf01f39bb42. * gnu/packages/backup.scm: Add missing import of (guix build-system cmake).
* gnu: Add zbackup.Nicolas Goaziou2020-04-30
| | | | * gnu/packages/backup.scm (zbackup): New variable.
* gnu: python2-pysnptools: Update to 0.4.11.Ricardo Wurmus2020-04-30
| | | | | | | * gnu/packages/python-xyz.scm (python2-pysnptools): Update to 0.4.11; implement in terms of... (python-pysnptools): ...this new variable. [propagated-inputs]: Add python-dill, python-h5py, and python-psutil.
* gnu: kaldi-gstreamer-server: Fix bug.Ricardo Wurmus2020-04-30
| | | | | * gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[arguments]: Patch master_server.py before build.
* gnu: kaldi-gstreamer-server: Use Tornado 6.Ricardo Wurmus2020-04-30
| | | | | * gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[inputs]: Replace python-tornado with python-tornado-6.
* gnu: Add python-tornado-6.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/python-web.scm (python-tornado-6): New variable.
* gnu: python2-warpedlmm: Fix build.Ricardo Wurmus2020-04-30
| | | | | | * gnu/packages/bioinformatics.scm (python2-warpedlmm)[propagated-inputs]: Add python2-weave. [arguments]: Disable tests and add "use-weave" phase.
* gnu: Add python2-weave.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/python-science.scm (python2-weave): New variable.
* gnu: Add r-rserve.Eric Brown2020-04-30
| | | | | | * gnu/packages/cran.scm (r-rserve): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: gnuradio: Fix runtime python environment for plugins.Guillaume Le Vaillant2020-04-30
| | | | | | * gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add PYTHONPATH. [native-inputs]: Move python ... [inputs]: ... here.
* gnu: linux-libre: Update to 5.4.36.Mark H Weaver2020-04-29
| | | | | * gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.36. (linux-libre-5.4-pristine-source): Update hash.
* gnu: linux-libre@5.6: Update to 5.6.8.Mark H Weaver2020-04-29
| | | | | * gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.8. (linux-libre-5.6-pristine-source): Update hash.
* gnu: linux-libre@4.19: Update to 4.19.119.Mark H Weaver2020-04-29
| | | | | * gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.119. (linux-libre-4.19-pristine-source): Update hash.
* gnu: python-hacking: Update to 1.1.0.Ricardo Wurmus2020-04-30
| | | | | | * gnu/packages/openstack.scm (python-hacking): Update to 1.1.0. [arguments]: Add "delete-broken-test" phase. [propagated-inputs]: Replace python-flake8-2.5 with python-flake8-2.6.
* gnu: python-flake8-2.5: Update to 2.6.2.Ricardo Wurmus2020-04-30
| | | | | | | | | | * gnu/packages/python-xyz.scm (python-flake8-2.5): Update to 2.6.2; rename it... (python-flake8-2.6): ...to this. [arguments]: Add phase "use-later-pycodestyles", and move "check" phase after "install". [propagated-inputs]: Explicitly list python-pycodestyle, python-entrypoints, python-pyflakes-1.2, and python-mccabe.
* gnu: Remove python2-flake8-2.5.Ricardo Wurmus2020-04-30
| | | | | * gnu/packages/python-xyz.scm (python2-flake8-2.5): Remove variable. (python-flake8-2.5)[properties]: Remove.
* gnu: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.Ricardo Wurmus2020-04-30
| | | | | | | * gnu/packages/python-xyz.scm (python-pyflakes-0.8.1): Remove variable. (python-pyflakes-1.2): New variable. * gnu/packages/openstack.scm (python-hacking)[propagated-inputs]: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.
* gnu: Remove python2-pyflakes-0.8.1.Ricardo Wurmus2020-04-30
| | | | * gnu/packages/python-xyz.scm (python2-pyflakes-0.8.1): Remove variable.
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