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* gnu: r-limsolve: Update to 1.5.6.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/cran.scm (r-limsolve): Update to 1.5.6.
* gnu: r-prodlim: Update to 2019.11.13.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/cran.scm (r-prodlim): Update to 2019.11.13.
* gnu: r-webshot: Update to 0.5.2.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/cran.scm (r-webshot): Update to 0.5.2.
* gnu: r-insight: Update to 0.7.0.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/cran.scm (r-insight): Update to 0.7.0.
* gnu: Add r-effectsize.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/cran.scm (r-effectsize): New variable.
* gnu: r-rcppeigen: Update to 0.3.3.7.0.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.7.0.
* gnu: r-rlang: Update to 0.4.2.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/statistics.scm (r-rlang): Update to 0.4.2.
* gnu: r-digest: Update to 0.6.23.Ricardo Wurmus2019-11-25
| | | | * gnu/packages/statistics.scm (r-digest): Update to 0.6.23.
* gnu: r-pheatmap: Move to (gnu packages cran).Ricardo Wurmus2019-11-25
| | | | | * gnu/packages/statistics.scm (r-pheatmap): Move from here... * gnu/packages/cran.scm (r-pheatmap): ...to here.
* gnu: r-scales: Update to 1.1.0.Ricardo Wurmus2019-11-25
| | | | | * gnu/packages/cran.scm (r-scales): Update to 1.1.0. [propagated-inputs]: Remove r-rcpp; add r-farver and r-lifecycle.
* gnu: r-scales: Move to (gnu packages cran).Ricardo Wurmus2019-11-25
| | | | | * gnu/packages/statistics.scm (r-scales): Move variable from here... * gnu/packages/cran.scm (r-scales): ...to here.
* gnu: sdsl-lite: Don't use bundled libraries.Efraim Flashner2019-11-25
| | | | | | | * gnu/packages/datastructures.scm (sdsl-lite)[source]: Remove bundled libraries in a snippet. Add patch to link to external libraries. [arguments]: Add phase to install static library. [native-inputs]: Add libdivsufsort.
* gnu: sdsl-lite: Remove unused inputs.Efraim Flashner2019-11-25
| | | | | | | | Documentation also wants graphviz, which drastically increases 'guiz size sdsl-lite'. * gnu/packages/datastructures.scm (sdsl-lite)[native-inputs]: Remove doxygen.
* gnu: libdivsufsort: Move to datastructures.scm.Efraim Flashner2019-11-25
| | | | | * gnu/packages/bioinformatics.scm (libdivsufsort): Move to ... * gnu/packages/datastructures.scm: ... here.
* gnu: Add boost-static.Efraim Flashner2019-11-25
| | | | * gnu/packages/boost.scm (boost-static): New variable.
* gnu: coq-bignums: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | * gnu/pacakges/coq.scm (coq-bignums)[source]: Download using git-fetch.
* gnu: bioperl-minimal: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/bioinformatics.scm (bioperl-minimal)[source]: Download using git-fetch.
* gnu: innoextract: Update to 1.8.Efraim Flashner2019-11-25
| | | | * gnu/packages/compression.scm (innoextract): Update to 1.8.
* gnu: innoextract: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/compression.scm (innoextract)[source]: Download the release tarball.
* gnu: unshield: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/compression.scm (unshield)[source]: Download using git-fetch.
* gnu: snappy: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/compression.scm (snappy)[source]: Download using git-fetch.
* gnu: sfarklib: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/compression.scm (sfarklib)[source]: Download using git-fetch.
* gnu: cinnamon-desktop: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/cinnamon.scm (cinnamon-desktop)[source]: Download using git-fetch.
* gnu: sparsehash: Don't use unstable tarball.Efraim Flashner2019-11-25
| | | | | * gnu/packages/datastructures.scm (sparsehash)[source]: Download using git-fetch.
* gnu: imlib2: Sort inputs alphabetically.Efraim Flashner2019-11-25
| | | | * gnu/packages/image.scm (imlib2)[inputs]: Sort alphabetically.
* gnu: imlib2: Update to 1.6.0.Efraim Flashner2019-11-25
| | | | | * gnu/packages/image.scm (imlib2): Update to 1.6.0. [inputs]: Add libwebp, libid3tag.
* gnu: gnunet-gtk: Sort inputs alphabetically.Efraim Flashner2019-11-25
| | | | * gnu/packages/gnunet.scm (gnunet-gtk)[inputs]: Sort alphabetically.
* gnu: gnunet-gtk: Update to 0.11.7.Efraim Flashner2019-11-25
| | | | | | * gnu/packages/gnunet.scm (gnunet-gtk): Update to 0.11.7. [version]: Don't inherit version from gnutls. [inputs]: Add gnutls/dane.
* gnu: gnunet: Update to 0.11.8.Efraim Flashner2019-11-25
| | | | | | | | | * gnu/packages/gnunet.scm: Update to 0.11.8. [inputs]: Add libidn2, miniupnpc, zbar. Remove glib, gmp, gst-plugins-base, libidn, nss, openssl, perl, python-2. [native-inputs]: Add python, xxd, which. [arguments]: Remove configure-flags. Add phase to remove network dependent tests. Re-arrange location of new 'check phase.
* gnu: gnunet-gtk: Set upstream ftp-directory.Efraim Flashner2019-11-25
| | | | | * gnu/packages/gnunet.scm (gnunet-gtk)[properties]: New field. Set ftp-directory.
* gnu: bambam: Update to 1.0.0.Tobias Geerinckx-Rice2019-11-24
| | | | | | * gnu/packages/games.scm (bambam): Update to 1.0.0. [arguments]: Use default Python (3). Delete obsolete ‘patch-data-dir-location’ phase.
* gnu: perl-test-simple: Update to 1.302169.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302169.
* gnu: restic: Update to 0.9.6.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/backup.scm (restic): Update to 0.9.6.
* gnu: Add shell-functools.Oleg Pykhalov2019-11-24
| | | | * gnu/packages/shellutils.scm (shell-functools): New variable.
* gnu: diffoscope: Update to 131.Vagrant Cascadian2019-11-23
| | | | * gnu/packages/diffoscope (diffoscope): Update to 131.
* gnu: jo: Update to 1.3.Oleg Pykhalov2019-11-24
| | | | * gnu/packages/web.scm (jo): Update to 1.3.
* gnu: sdl2: Add libxcursor to inputs.Oleg Pykhalov2019-11-24
| | | | * gnu/packages/sdl.scm (sdl2)[inputs]: Add libxcursor.
* gnu: vte: Update to 0.58.3.Tobias Geerinckx-Rice2019-11-24
| | | | | * gnu/packages/gnome.scm (vte): Update to 0.58.3. [build-system]: Switch to Meson.
* gnu: vte: Don't use NAME in source URI.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/gnome.scm (vte)[source]: Hard-code NAME.
* gnu: ruby-jaro-winkler: Update to 1.5.4.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-jaro-winkler): Update to 1.5.4.
* gnu: ruby-mimemagic: Update to 0.3.3.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-mimemagic): Update to 0.3.3.
* gnu: ruby-notiffany: Update to 0.1.3.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-notiffany): Update to 0.1.3.
* gnu: ruby-oauth2: Update to 1.4.2.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-oauth2): Update to 1.4.2.
* gnu: ruby-simplecov: Update to 0.17.1.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-simplecov): Update to 0.17.1.
* gnu: ruby-progressbar: Update to 1.10.1.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-progressbar): Update to 1.10.1.
* gnu: ruby-websocket-driver: Update to 0.7.1.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-websocket-driver): Update to 0.7.1.
* gnu: ruby-useragent: Update to 0.16.10.Tobias Geerinckx-Rice2019-11-24
| | | | * gnu/packages/ruby.scm (ruby-useragent): Update to 0.16.10.
* compile: Adjust for Guile 2.9.5.Ludovic Courtès2019-11-23
| | | | | | * guix/build/compile.scm (optimizations-for-level): New procedure. Include '%lightweight-optimizations' and '%default-optimizations'. (optimization-options): Use 'optimizations-for-level'.
* tests: Use (ice-9 threads).Ludovic Courtès2019-11-23
| | | | | | | 'call-with-new-thread' as a core binding is deprecated in 2.2 and removed in 3.0. * tests/publish.scm: Use (ice-9 threads).
* gnu: guile-sqlite3: Add "guile3.0-sqlite3" variant.Ludovic Courtès2019-11-23
| | | | | | * gnu/packages/guile.scm (guile-sqlite3)[source](modules, snippet): New fields. (guile3.0-sqlite3): New variable.
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