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* gnu: Add git-lfs.Kei Kebreau2019-04-20
| | | | * gnu/packages/version-control.scm (git-lfs): New variable.
* gnu: ibus-libpinyin: Add missing runtime input.Ricardo Wurmus2019-04-20
| | | | * gnu/packages/ibus.scm (ibus-libpinyin)[inputs]: Add python-pygobject.
* gnu: libpinyin: Update to 2.3.0.Ricardo Wurmus2019-04-20
| | | | * gnu/packages/ibus.scm (libpinyin): Update to 2.3.0.
* gnu: ibus-libpinyin: Update to 1.11.0.Ricardo Wurmus2019-04-20
| | | | * gnu/packages/ibus.scm (ibus-libpinyin): Update to 1.11.0.
* gnu: ibus: Update to 1.5.20.Ricardo Wurmus2019-04-20
| | | | | | | * gnu/packages/ibus.scm (ibus): Update to 1.5.20. [arguments]: Remove make-flags; remove "--disable-python2" from configure-flags; add build phase "patch-python-target-directories". [inputs]: Replace intltool with gnu-gettext.
* gnu: rct: Be more idiomatic.Leo Famulari2019-04-19
| | | | | | | * gnu/packages/cpp.scm (rct): Move the call to 'git-version' into the package definition. [source]: Explicitly include the source URI rather than using 'home-page'.
* gnu: linux-libre: Update to 5.0.8.Mark H Weaver2019-04-19
| | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.8. (%linux-libre-hash): Update hash.
* gnu: linux-libre@4.19: Update to 4.19.35.Mark H Weaver2019-04-19
| | | | | * gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.35. (%linux-libre-4.19-hash): Update hash.
* gnu: linux-libre@4.14: Update to 4.14.112.Mark H Weaver2019-04-19
| | | | | * gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.112. (%linux-libre-4.14-hash): Update hash.
* gnu: linux-libre@4.9: Update to 4.9.169.Mark H Weaver2019-04-19
| | | | * gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.169.
* gnu: Add r-styler.Nicolò Balzarotti2019-04-19
| | | | | | * gnu/packages/cran.scm (r-styler): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: grammalecte: Update to 1.0.1.Nicolas Goaziou2019-04-19
| | | | | * gnu/packages/dictionaries.scm (grammalecte): Update to 1.0.1. [source]: Update URL.
* gnu: linkchecker: Shorten patch file name.Ludovic Courtès2019-04-19
| | | | | | | | | | This file name was too long for 'tar', as reported by 'guix lint'. * gnu/packages/patches/linkchecker-mark-more-tests-that-require-the-network.patch: Rename to... * gnu/packages/patches/linkchecker-tests-require-network.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/web.scm (linkchecker)[source]: Likewise.
* gnu: ocaml-dose3: Shorten patch file name.Ludovic Courtès2019-04-19
| | | | | | | | | | This file name was too long for 'tar', as reported by 'guix lint'. * gnu/packages/patches/ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch: Rename to... * gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/ocaml.scm (ocaml-dose3)[source]: Adjust accordingly.
* build: Show completion percentage while building.Ludovic Courtès2019-04-19
| | | | | * build-aux/compile-all.scm (%): New procedure. (command-line): Use it to report completion.
* maint: Build all the 'guix' packages in parallel.Ludovic Courtès2019-04-19
| | | | | | | | | | | Until now, the 'guix' package shipped in binary tarballs and system images would be built sequentially for each system type, one at a time. Now all of them can potentially be built in parallel. * Makefile.am (system_flags): New function. (release): Run "guix build guix" before "make binary-tarballs" and before "guix system disk-image" to build all the 'guix' packages in parallel.
* maint: 'release' clears gettext-induced changes in doc/.Ludovic Courtès2019-04-19
| | | | * Makefile.am (release): Run "git checkout ." in doc/
* guix build: Accept multiple '-s' options.Ludovic Courtès2019-04-19
| | | | | | | | | | | * guix/scripts/build.scm (%default-options): Remove 'system'. (%options) <--system>: Keep previous occurrences of 'system in RESULT. (options->derivations)[system]: Remove. [systems, things-to-build]: New variables. [compute-derivation]: New procedure. Iterate on all of SYSTEMS to compute the derivations of THINGS-TO-BUILD. * tests/guix-build.sh: Add test for one and multiple '-s' flags. * doc/guix.texi (Additional Build Options): Document this behavior.
* gnu: r-seurat: Update to 3.0.0.Ricardo Wurmus2019-04-19
| | | | | | | | * gnu/packages/bioinformatics.scm (r-seurat): Update to 3.0.0. [propagated-inputs]: Remove r-dosnow, r-dplyr, r-dtw, r-foreach, r-fpc, r-gplots, r-hdf5r, r-hmisc, r-httr, r-lars, r-mixtools, r-reshape2, and r-tidyr; add r-future, r-future-apply, r-ggrepel, r-kernsmooth, r-rlang, r-rsvd, r-scales, and r-sctransform.
* gnu: Add r-sctransform.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/cran.scm (r-sctransform): New variable.
* gnu: r-urltools: Update to 1.7.3.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/cran.scm (r-urltools): Update to 1.7.3.
* gnu: r-rdpack: Update to 0.11-0.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/cran.scm (r-rdpack): Update to 0.11-0.
* gnu: r-sdmtools: Update to 1.1-221.1.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/cran.scm (r-sdmtools): Update to 1.1-221.1.
* gnu: r-hardyweinberg: Update to 1.6.2.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.2.
* gnu: r-clipr: Update to 0.6.0.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/cran.scm (r-clipr): Update to 0.6.0.
* gnu: r-caret: Update to 6.0-83.Ricardo Wurmus2019-04-19
| | | | * gnu/packages/statistics.scm (r-caret): Update to 6.0-83.
* gnu: klick: Fix build with latest scons.Ricardo Wurmus2019-04-19
| | | | | * gnu/packages/music.scm (klick)[arguments]: Patch "SConstruct" file to make it compatible with the current version of scons.
* gnu: perl-datetime-timezone: Fix missing timezone data.Christopher Baines2019-04-19
| | | | | | | | | I noticed this when using Sqitch, on systems without /usr/share/zoneinfo, actions like deploy fail. * gnu/packages/perl.scm (perl-datetime-timezone)[arguments]: Add 'patch-tzdata phase to replace /usr/share/zoneinfo with a reference to the tzdata package. [inputs]: Add the tzdata package.
* gnu: python2-send2trash: Don't inherit properties from python-send2trash.Marius Bakke2019-04-19
| | | | | | | This is a follow-up to commit 20b3fde7763a14f605ac8a0aba1abfa73a6e7dda. Commits and beer do not mix well. * gnu/packages/python-xyz.scm (python2-send2trash): Inherit using STRIP-PYTHON2-VARIANT.
* gnu: python-send2trash: Really delay Python2 variant.Marius Bakke2019-04-19
| | | | | | | | This is a follow-up to commit 4782a06f45d515eebc4d1ee8e958def409a0ef9f, which somehow solved my problem, but did so incorrectly. * gnu/packages/python-xyz.scm (python-send2trash)[properties]: Refer to PYTHON2-SEND2TRASH.
* gnu: gpgme: Update to 1.13.0.Marius Bakke2019-04-19
| | | | | * gnu/packages/gnupg.scm (gpgme): Update to 1.13.0. [source](patches): Remove.
* gnu: python-send2trash: Properly delay python2 variant.Marius Bakke2019-04-19
| | | | | * gnu/packages/python-xyz.scm (python2-send2trash)[properties]: Move from here ... (python-send2trash)[properties]: ... to here.
* gnu: python-service-identity: Update to 18.1.0.Marius Bakke2019-04-19
| | | | * gnu/packages/python-crypto.scm (python-service-identity): Update to 18.1.0.
* gnu: python-jsonschema: Update to 3.0.1.Marius Bakke2019-04-19
| | | | | | | | | * gnu/packages/python-xyz.scm (python-jsonschema): Update to 3.0.1. [arguments]: Adjust check phase for Twisted instead of nosetests. [native-inputs]: Remove PYTHON-NOSE and PYTHON-VCVERSIONER. Add PYTHON-SETUPTOOLS-SCM and PYTHON-TWISTED. [propagated-inputs]: Add PYTHON-ATTRS, PYTHON-PYRSISTENT and PYTHON-SIX. (python2-jsonschema)[native-inputs, propagated-inputs]: Inherit.
* gnu: Add python-pyrsistent.Marius Bakke2019-04-19
| | | | | * gnu/packages/python-xyz.scm (python-pyrsistent, python2-pyrsistent): New public variables.
* gnu: python-twisted: Update to 19.2.0.Marius Bakke2019-04-19
| | | | | * gnu/packages/python-xyz.scm (python-twisted): Update to 19.2.0. [propagated-inputs]: Add PYTHON-PYHAMCREST.
* gnu: python-automat: Update to 0.7.0.Marius Bakke2019-04-19
| | | | * gnu/packages/python-xyz.scm (python-automat): Update to 0.7.0.
* gnu: python-m2r: Update to 0.2.1.Marius Bakke2019-04-19
| | | | * gnu/packages/python-xyz.scm (python-m2r): Update to 0.2.1.
* gnu: python-idna: Update to 2.8.Marius Bakke2019-04-19
| | | | * gnu/packages/python-xyz.scm (python-idna): Update to 2.8.
* gnu: python-hyperlink: Update to 19.0.0.Marius Bakke2019-04-19
| | | | * gnu/packages/python-web.scm (python-hyperlink): Update to 19.0.0.
* gnu: python-zope-interface: Update to 4.6.0.Marius Bakke2019-04-19
| | | | * gnu/packages/python-web.scm (python-zope-interface): Update to 4.6.0.
* gnu: xmlsec: Update to 1.2.28.Marius Bakke2019-04-19
| | | | * gnu/packages/xml.scm (xmlsec): Update to 1.2.28.
* guile-build-system: Support building in parallel.Christopher Baines2019-04-18
| | | | | | * guix/build/guile-build-system.scm (build): Use invoke-each, instead of for-each, to use multiple cores if available. (invoke-each, report-build-process): New procedures.
* lint: 'check-github-url' uses our own 'open-connection-for-uri'.Ludovic Courtès2019-04-18
| | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/35053>. Reported by Efraim Flashner <efraim@flashner.co.il>. Previously 'check-github-url' would let Guile 2.2's (web client) module take care of opening the connection. Consequently, it wouldn't use the TLS priority strings that we use in (guix build download), 'open-connection-for-uri'. In particular, it would not disable TLSv1.3, which would trigger <https://bugs.gnu.org/34102> for github.com. * guix/scripts/lint.scm (check-github-url): Add #:timeout parameter. [follow-redirect]: Change parameter name to 'url' and pass it to 'string->uri'. Call 'guix:open-connection-for-uri' to open the connection and pass it to 'http-head' via #:port.
* gnu: gnuastro: Update to 0.9.Efraim Flashner2019-04-18
| | | | | * gnu/packages/astronomy.scm (gnuastro): Update to 0.9. [native-inputs]: Add libtool.
* gnu: nano: Update to 4.1.Efraim Flashner2019-04-18
| | | | * gnu/packages/nano.scm (nano): Update to 4.1.
* gnu: xpra: Update to 2.5.1.Rutger Helling2019-04-18
| | | | * gnu/packages/xorg.scm (xpra): Update to 2.5.1.
* gnu: rclone: Update to 1.47.0.Tobias Geerinckx-Rice2019-04-17
| | | | * gnu/packages/sync.scm (rclone): Update to 1.47.0.
* gnu: console-setup: Update to 1.191.Tobias Geerinckx-Rice2019-04-17
| | | | * gnu/packages/xorg.scm (console-setup): Update to 1.191.
* installer: Sort keyboard layouts according to language and translations.Ludovic Courtès2019-04-17
| | | | | | | | | | | Previously, we would always (1) put English first, and (2) sort the other layouts based on their English description. This fixes both issues. * gnu/installer/newt/keymap.scm (sort-layouts)[layout<?]: New procedure. [preferred]: New variable. Partition according to both the 'name' and 'synopsis' fields. Sort both the main layouts and the other layouts according to 'layout<?'.
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