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* gnu: gnumach-headers: Update to 1.8.Manolis Ragkousis2016-12-19
| | | | * gnu/packages/hurd.scm (gnumach-headers): Update to version 1.8.
* gnu: gnuplot: Update to 5.0.5.Kei Kebreau2016-12-18
| | | | * gnu/packages/maths.scm (gnuplot): Update to 5.0.5.
* gnu: wxmaxima: Update to 16.12.0.Kei Kebreau2016-12-18
| | | | * gnu/packages/maths.scm (wxmaxima): Update to 16.12.0.
* gnu: tor: split description into two parts for easier reading.Kei Kebreau2016-12-18
| | | | * gnu/packages/tor.scm (tor)[description]: Split it.
* gnu: maxima: Update to 5.39.0.Kei Kebreau2016-12-18
| | | | * gnu/packages/maths.scm (maxima): Update to 5.39.0.
* build: Fix .service and .conf targets for VPATH builds.Ludovic Courtès2016-12-18
| | | | | * nix/local.mk (etc/guix-%.service, etc/guix-%.conf): Use "$<", not "$(srcdir)/$<".
* build: Add 'guix-publish.*.in' to the distribution.Ludovic Courtès2016-12-18
| | | | | | | This is a followup to 332d7903f52c2bf3741b04ac2d01cd9018b70800. * nix/local.mk (EXTRA_DIST): Add 'guix-service.publish.in' and 'guix-publish.conf.in'.
* doc: Mention the d3.js backend of 'guix graph'.Ludovic Courtès2016-12-18
| | | | * doc/guix.texi (Invoking guix graph): Mention the d3.js backend.
* doc: Document 'cargo-build-system'.Ludovic Courtès2016-12-18
| | | | * doc/guix.texi (Build Systems): Add 'cargo-build-system'.
* gnu: mumble: Update to 1.2.18.Marius Bakke2016-12-18
| | | | * gnu/packages/telephony.scm (mumble): Update to 1.2.18.
* gnu: python-docutils: Update to 0.13.1Hartmut Goebel2016-12-18
| | | | | * gnu/packages/python.scm(python-docutils): Update to 0.13.1. [source]: Use pypi-uri.
* tests: Mock up http-fetch.Ricardo Wurmus2016-12-18
| | | | | | | This is a follow-up to commit 63773200d7ac68fcaee6efd9ffe8ea7aa3fafa38. * tests/cpan.scm ("cpan->guix-package"): Add mock definition of http-fetch.
* tests: Adjust cpan tests.Ricardo Wurmus2016-12-18
| | | | | | | This is a follow-up to commit ff55fe559951b88bfd691b9dada3a0f26002c4cb. * tests/cpan.scm (source-url-http, source-url-https): Use cpan-source-url.
* linux-initrd: Support FAT filesystems.Marius Bakke2016-12-18
| | | | | | * gnu/system/linux-initrd.scm (base-initrd): When a FAT filesystem is present: Add fatfsck/static in 'helper-packages'; and add nls_iso8859-1 in 'linux-modules'.
* build: check-final-inputs-self-contained has an exception for 'bash:include'.Ludovic Courtès2016-12-18
| | | | | | | | Currently 'bash:include' of the final Bash depends on bootstrap stuff. * build-aux/check-final-inputs-self-contained.scm (final-inputs): Add clause for 'bash:include'. * gnu/packages/commencement.scm (bash-final): Add FIXME comment.
* gnu: yoshimi: Update to 1.5.0.Ricardo Wurmus2016-12-18
| | | | * gnu/packages/music.scm (yoshimi): Update to 1.5.0.
* tests: Mock up http-fetch in import test.Ricardo Wurmus2016-12-18
| | | | | | | This is a follow-up to commit 63773200d7ac68fcaee6efd9ffe8ea7aa3fafa38. * tests/pypi.scm ("pypi->guix-package, wheels"): Add mock definition of "http-fetch".
* gnu: emacs-org: Update to 20161214.Nicolas Goaziou2016-12-18
| | | | | | * gnu/packages/emacs.scm (emacs-org): Update to 20161214. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* tests: Mock up http-fetch in import tests.Ricardo Wurmus2016-12-18
| | | | | | | | | This is a follow-up to commit 63773200d7ac68fcaee6efd9ffe8ea7aa3fafa38. * tests/gem.scm ("gem->guix-package"): Replace mock definition of "url-fetch" with "http-fetch". * tests/pypi.scm ("pypi->guix-package"): Add mock definition of "http-fetch".
* gnu: youtube-dl: Update to 2016.12.15.Leo Famulari2016-12-17
| | | | * gnu/packages/video.scm (youtube-dl): Update to 2016.12.15.
* gnu: r: Update to 3.3.2.Raoul Bonnal2016-12-18
| | | | * gnu/packages/statistics.scm (r): Update to 3.3.2.
* gnu: Add attribution line for Raoul Bonnal.Ben Woodcroft2016-12-18
| | | | | | This is a follow-up commit to c9e9154e993f055a438e2e43518bbd0740aaaf24. * gnu/packages/bioinformatics.scm: Add attribution.
* gnu: sane-backends: Remove timestamps from the output.Ludovic Courtès2016-12-17
| | | | | * gnu/packages/scanner.scm (sane-backends-minimal)[source](modules, snippet): New fields.
* gnu: Add and use sane-backends.Andy Patterson2016-12-17
| | | | | | | | | | * gnu/packages/scanner.scm (sane-backends): New variable. * gnu/packages/gnome.scm (colord, simple-scan): Use it instead of 'sane-backends-minimal'. * gnu/packages/libreoffice.scm (libreoffice): Likewise. * gnu/packages/wine.scm (wine): Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add and use sane-backends-minimal.Andy Patterson2016-12-17
| | | | | | | | | | | | | * gnu/packages/scanner.scm (sane-backends): Rename to... (sane-backends-minimal): this. Adjust name, source, synopsis and description accordingly. * gnu/packages/cups.scm (hplip): Use 'sane-backends-minimal' instead of 'sane-backends'. * gnu/packages/gnome.scm (colord, simple-scan): Likewise. * gnu/packages/libreoffice.scm (libreoffice): Likewise. * gnu/packages/wine.scm (wine): Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: sane-backends: Disable backend generation.Andy Patterson2016-12-17
| | | | | | | * gnu/packages/scanner.scm (sane-backends)[arguments]: Add a phase to disable the compilation of backends. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: pinentry: Update to 1.0.0.Leo Famulari2016-12-17
| | | | | * gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3, pinentry-qt): Update to 1.0.0.
* gnu: npth: Update to 1.3.Leo Famulari2016-12-17
| | | | * gnu/packages/gnupg.scm (npth): Update to 1.3.
* import cran: Handle HTTP errors.Ricardo Wurmus2016-12-17
| | | | | | | Fixes <http://bugs.gnu.org/23479>. * guix/import/cran.scm (fetch-description): Return #f in case of HTTP errors.
* guix import: Print list of expressions.Ricardo Wurmus2016-12-17
| | | | * guix/scripts/import.scm (guix-import): Print list of expressions.
* import cran: Add "recursive" option.Ricardo Wurmus2016-12-17
| | | | | | * guix/scripts/import/cran.scm: (%options): Add "recursive" option. (guix-import-cran): Handle "recursive" option. * doc/guix.texi (Invoking guix import): Document it.
* import cran: Add recursive importer.Ricardo Wurmus2016-12-17
| | | | | * guix/import/cran.scm (recursive-import): New variable. (cran->guix-package): Memoize the procedure.
* import cran: Ignore default R packages.Ricardo Wurmus2016-12-17
| | | | | * guix/import/cran.scm (default-r-packages): New variable. (description->package): Drop default R packages from list of inputs.
* import cran: description->package: Also return package dependencies.Ricardo Wurmus2016-12-17
| | | | | * guix/import/cran.scm (description->package): Return package dependencies in addition to generated package expression.
* import cran: Move guix-name to top-level.Ricardo Wurmus2016-12-17
| | | | * guix/import/cran.scm (guix-name): Move to top-level.
* import cran: Remove more invalid characters from package names.Ricardo Wurmus2016-12-17
| | | | | * guix/import/cran.scm (guix-name): Replace period and underscore with dash; always prepend package names with "r-".
* import cran: Handle BSD licenses with LICENSE file.Ricardo Wurmus2016-12-17
| | | | | * guix/import/cran.scm (string->license): Add cases for BSD licenses with LICENSE file.
* import cran: Translate MIT to the Expat license.Ricardo Wurmus2016-12-17
| | | | | * guix/import/cran.scm (string->license): Translate "MIT" license to Expat license.
* import cran: Do not use "or later" licenses by default.Ricardo Wurmus2016-12-17
| | | | * guix/import/cran.scm (string->license): Use exact license versions.
* doc: Update dot graphs.Ludovic Courtès2016-12-17
| | | | | | * doc/images/bootstrap-packages.dot, doc/images/coreutils-bag-graph.dot, doc/images/coreutils-graph.dot, doc/images/shepherd-graph.dot: Regenerate.
* profiles: Remove dependency on 'glibc-utf8-locales' for tests.Ludovic Courtès2016-12-17
| | | | | | | | | | | | | | | | | | Commit 1af0860e8be81c01ad405c1226d6bc4516e62863 added a mandatory dependency on 'glibc-utf8-locales', which entails long rebuilds for tests. * guix/profiles.scm (profile-derivation): Add #:locales? parameter. Add 'set-utf8-locale' variable. Use it when LOCALES? is true. (link-to-empty-profile): Pass #:locales? #f. * guix/scripts/environment.scm (inputs->profile-derivation): Pass #:locales?. * guix/scripts/package.scm (build-and-use-profile): Likewise. * tests/packages.scm ("--search-paths with pattern"): Pass #:locales? #f. * tests/profiles.scm ("profile-derivation") ("profile-derivation, inputs", "profile-manifest, search-paths") ("etc/profile", "etc/profile when etc/ already exists"): ("etc/profile when etc/ is a symlink"): Likewise.
* gnu: bootstrap: Add FTP URL for bootstrap binaries.Ludovic Courtès2016-12-17
| | | | | * gnu/packages/bootstrap.scm (%bootstrap-base-urls): Add ftp://alpha.gnu.org (http://alpha.gnu.org is currently unresponsive.)
* gnu: star: Update to 2.5.2b.Raoul Bonnal2016-12-17
| | | | | | | * gnu/packages/bioinformatics (star): Update to 2.5.2b. [source]: Delete precompiled binary. Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
* gnu: Add fatfsck-static.Marius Bakke2016-12-17
| | | | | * gnu/packages/disk.scm (dosfstools/static): New private variable. (fatfsck/static): New variable.
* gnu: Add emacs-guix.Alex Kost2016-12-17
| | | | * gnu/packages/emacs.scm (emacs-guix): New variable.
* gnu: Add emacs-bui.Alex Kost2016-12-17
| | | | * gnu/packages/emacs.scm (emacs-bui): New variable.
* gnu: imagemagick: Update to 6.9.6-8.Leo Famulari2016-12-17
| | | | * gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-8.
* gnu: acme-client: Provide path to certificates.Leo Famulari2016-12-17
| | | | * gnu/packages/tls.scm (acme-client)[arguments]: Add 'patch-paths' phase.
* build: assert-no-store-file-names: Ignore ChangeLog.Ricardo Wurmus2016-12-17
| | | | | * Makefile.am (assert-no-store-file-names): Ignore /gnu/store file names in the ChangeLog, because they might be examples in commit messages.
* gnu: libupnp: Fix CVE-2016-8863.Leo Famulari2016-12-16
| | | | | | * gnu/packages/patches/libupnp-CVE-2016-8863.patch: New file. * gnu/local.mk (dist_patch_DATA): Use it. * gnu/packages/libupnp.scm (libupnp)[source]: Use it.
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