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* Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-03-23
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| * gnu: idris: Update to 0.99.1.Peter Mikkelsen2017-03-23
| | | | | | | | | | | | | | * gnu/packages/idris.scm (idris): Update to 0.99.1. [inputs]: Add ghc-code-page. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: Add ghc-code-page.Peter Mikkelsen2017-03-23
| | | | | | | | | | | | * gnu/packages/haskell.scm (ghc-code-page): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: star: Update to 2.5.3a.Ricardo Wurmus2017-03-23
| | | | | | | | * gnu/packages/bioinformatics.scm (star): Update to 2.5.3a.
| * gnu: youtube-dl: Update to 2017.03.22.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/video.scm (youtube-dl): Update to 2017.03.22.
| * gnu: python-natsort: Update to 5.0.2.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-natsort): Update to 5.0.2.
| * gnu: python2-futures: Update to 3.0.5.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python2-futures): Update to 3.0.5.
| * gnu: python-rauth: Update to 0.7.3.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-rauth): Update to 0.7.3.
| * gnu: python-ipaddress: Update to 1.0.18.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-ipaddress): Update to 1.0.18.
| * gnu: python-appdirs: Update to 1.4.3.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-appdirs): Update to 1.4.3.
| * gnu: python-beautifulsoup4: Update to 4.5.3.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-beautifulsoup4): Update to 4.5.3.
| * gnu: python-drmaa: Update to 0.7.7.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-drmaa): Update to 0.7.7.
| * gnu: python-sqlalchemy-utils: Update to 0.32.13.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.13.
| * gnu: python-pafy: Update to 0.5.3.1.Tobias Geerinckx-Rice2017-03-23
| | | | | | | | * gnu/packages/python.scm (python-pafy): Update to 0.5.3.1.
| * gnu: libffcall: Set source file-name.Efraim Flashner2017-03-22
| | | | | | | | | | * gnu/packages/libffcall.scm (libffcall)[source]: Add file-name field. [home-page]: Use https.
| * gnu: chicken: Update to 4.12.0.Kei Kebreau2017-03-22
| | | | | | | | * gnu/packages/scheme.scm (chicken): Update to 4.12.0.
| * gnu: dovecot: Update to 2.2.28.Leo Famulari2017-03-22
| | | | | | | | * gnu/packages/mail.scm (dovecot): Update to 2.2.28.
| * gnu: rustc: Honor max line length.Danny Milosavljevic2017-03-22
| | | | | | | | | | * gnu/packages/rust.scm (rustc)[arguments]: patch-tests: Honor max line length.
| * gnu: guix: Update development snapshot.Ludovic Courtès2017-03-22
| | | | | | | | * gnu/packages/package-management.scm (guix-devel): Update to 73a4645.
| * gnu: binutils-vc4: Set source file-name.Efraim Flashner2017-03-22
| | | | | | | | * gnu/packages/embedded.scm (binutils-vc4)[source]: Add file-name field.
| * build: 'test-driver.scm' prints Scheme values with 'write'.Ludovic Courtès2017-03-22
| | | | | | | | | | | | | | | | Previously it would print them with 'display', which was inconvenient. * build-aux/test-driver.scm (test-display): Use ~S for VALUE. (test-runner-gnu): Use 'format' instead of 'test-display' for the test name, location, and result kind.
| * tests: Skip 'guix pack' test when networking is unavailable.Ludovic Courtès2017-03-22
| | | | | | | | * tests/pack.scm ("self-contained-tarball"): Skip unless (network-reachable?).
| * tests: Fix 'cond-expand' clause for 2.2/2.0.Ludovic Courtès2017-03-22
| | | | | | | | | | | | | | | | Fixes a mistake in a9a0227c0127e1813190a7664f7ad858e791480d. * tests/store.scm ("current-build-output-port, UTF-8 + garbage"): Inverse the 'cond-expand' clauses since the 'guile-2.0' feature doesn't exist.
| * gnu: autoconf-archive: Update to 2017.03.21.Efraim Flashner2017-03-22
| | | | | | | | * gnu/packages/autotools.scm (autoconf-archive): Update to 2017.03.21.
| * publish: Add '--nar-path'.Ludovic Courtès2017-03-22
| | | | | | | | | | | | * guix/scripts/publish.scm (show-help, %options): Add '--nar-path'. (%default-options): Add 'nar-path'. (guix-publish): Honor it.
| * publish: Make the nar URL prefix a parameter.Ludovic Courtès2017-03-22
| | | | | | | | | | | | | | | | * guix/scripts/publish.scm (narinfo-string): Add #:nar-path and honor it. (render-narinfo): Likewise. (make-request-handler): Likewise. (run-publish-server): Likewise. * tests/publish.scm ("custom nar path"): New test.
| * publish: Add '--public-key' and '--private-key'.Ludovic Courtès2017-03-22
| | | | | | | | | | | | * guix/scripts/publish.scm (show-help, %options): Add --public-key and --private-key. * doc/guix.texi (Invoking guix publish): Document it.
| * publish: The public and private keys are now SRFI-39 parameters.Ludovic Courtès2017-03-22
| | | | | | | | | | | | | | | | | | | | | | | | * guix/scripts/publish.scm (%default-options): Add 'public-key-file' and 'private-key-file'. (lazy-read-file-sexp): Remove. (%private-key, %public-key): Turn into SRFI-39 parameters. (signed-string, render-narinfo): Adjust accordingly. (guix-publish): Honor 'public-key-file' and 'private-key-file' from OPTS. Use 'parameterize'. * guix/pk-crypto.scm (read-file-sexp): New procedure. * tests/publish.scm: Initialize '%public-key' and '%private-key'.
| * gnu: guile: Add 'guile-next' as a deprecated alias.Ludovic Courtès2017-03-22
| | | | | | | | | | | | This is a followup to f6396d862f9f8ce0c0e6894ce30599773167af0c. * gnu/packages/guile.scm (guile-next): New variable.
| * gnu: rustc: End resultless phases in #t.Danny Milosavljevic2017-03-22
| | | | | | | | * gnu/packages/rust.scm (rustc): End resultless phases in #t.
| * gnu: python-pysam: Run tests in parallel.Ricardo Wurmus2017-03-22
| | | | | | | | | | * gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nose tests in parallel.
| * gnu: python-pysam: Run tests before installation.Ricardo Wurmus2017-03-22
| | | | | | | | | | * gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust check phase to be run before installation.
| * gnu: python-pysam: Update to 0.10.0.Ricardo Wurmus2017-03-22
| | | | | | | | * gnu/packages/bioinformatics.scm (python-pysam): Update to 0.10.0.
| * gnu: perl-mojolicious: Update to 7.29.Efraim Flashner2017-03-22
| | | | | | | | * gnu/packages/perl-web.scm (perl-mojolicious): Update to 7.29.
| * gnu: perl-io-compress: Update to 2.074.Efraim Flashner2017-03-22
| | | | | | | | | | * gnu/packages/compression.scm (perl-io-compress): Update to 2.074. [propagated-inputs]: Update minimum versions to 2.074.
| * gnu: perl-compress-raw-bzip2: Update to 2.074.Efraim Flashner2017-03-22
| | | | | | | | * gnu/packages/compression.scm (perl-compress-raw-bzip2): Update to 2.074.
| * gnu: perl-compress-raw-zlib: Update to 2.074.Efraim Flashner2017-03-22
| | | | | | | | * gnu/packages/compression.scm (perl-compress-raw-zlib): Update to 2.074.
* | gnu: dtc: Build with flex-2.6.1.Efraim Flashner2017-03-23
| | | | | | | | | | * gnu/packages/bootloaders.scm (dtc)[native-inputs]: Use flex-2.6.1 and not flex.
* | gnu: scotch: Build with flex-2.6.1.Efraim Flashner2017-03-23
| | | | | | | | | | * gnu/packages/maths.scm (scotch)[native-inputs]: Use flex-2.6.1 and not flex.
* | gnu: libffcall: Remove aarch64-linux from supported systems.Efraim Flashner2017-03-23
| | | | | | | | | | | | * gnu/packages/libffcall.scm (libffcall)[supported-systems]: New field, remove aarch64-linux. [home-page]: Use https.
* | gnu: gpsbabel: Fix a build failure with GCC 5.Leo Famulari2017-03-22
| | | | | | | | * gnu/packages/gps.scm (gpsbabel)[arguments]: Add -fPIC to #:configure-flags.
* | gnu: wine: Build with flex-2.6.1.Efraim Flashner2017-03-22
| | | | | | | | | | * gnu/packages/wine.scm (wine)[native-inputs]: Use flex-2.6.1 and not flex.
* | gnu: binutils-vc4: Build with flex-2.6.1.Efraim Flashner2017-03-22
| | | | | | | | | | * gnu/packages/embedded.scm (binutils-vc4)[native-inputs]: Use flex-2.6.1 and not flex.
* | gnu: freeimage: Fix build with GCC 5.Ricardo Wurmus2017-03-22
| | | | | | | | | | | | * gnu/packages/patches/freeimage-fix-build-with-gcc-5.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (freeimage)[source]: Add patch.
* | gnu: python-pysam: Run tests in parallel.Ricardo Wurmus2017-03-22
| | | | | | | | | | * gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Run nose tests in parallel.
* | gnu: python-pysam: Run tests before installation.Ricardo Wurmus2017-03-22
| | | | | | | | | | * gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust check phase to be run before installation.
* | gnu: python-pysam: Update to 0.10.0.Ricardo Wurmus2017-03-22
| | | | | | | | * gnu/packages/bioinformatics.scm (python-pysam): Update to 0.10.0.
* | Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-03-22
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| * gnu: openssh: Update to 7.5p1.Leo Famulari2017-03-22
| | | | | | | | * gnu/packages/ssh.scm (openssh): Update to 7.5p1.
| * gnu: ntp: Update to 4.2.8p10 [security fixes].Leo Famulari2017-03-22
| | | | | | | | | | | | | | Fixes CVE-2016-9042 and CVE-2017-{6451,6452,6455,6458,6459,6460,6462,6463,6464} and others. See 'NEWS' in the source code for more information. * gnu/packages/ntp.scm (ntp): Update to 4.2.8p10.
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