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* gnu: Add texlive-metapost.•••* gnu/packages/tex.scm (texlive-metapost): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-lh.•••* gnu/packages/tex.scm (texlive-latex-lh): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-eepic.•••* gnu/packages/tex.scm (texlive-latex-eepic): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-eso-pic.•••* gnu/packages/tex.scm (texlive-latex-eso-pic): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-fonts-ec.•••* gnu/packages/tex.scm (texlive-fonts-ec): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-generic-epsf.•••* gnu/packages/tex.scm (texlive-generic-epsf): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-wasysym.•••* gnu/packages/tex.scm (texlive-latex-wasysym): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-titlesec.•••* gnu/packages/tex.scm (texlive-latex-titlesec): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-subfigure.•••* gnu/packages/tex.scm (texlive-latex-subfigure): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-fonts-stmaryrd.•••* gnu/packages/tex.scm (texlive-fonts-stmaryrd): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-pdfpages.•••* gnu/packages/tex.scm (texlive-latex-pdfpages): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-overpic.•••* gnu/packages/tex.scm (texlive-latex-overpic): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-multirow.•••* gnu/packages/tex.scm (texlive-latex-multirow): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-jknapltx.•••* gnu/packages/tex.scm (texlive-latex-jknapltx): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-listings.•••* gnu/packages/tex.scm (texlive-latex-listings): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-footmisc.•••* gnu/packages/tex.scm (texlive-latex-footmisc): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-float.•••* gnu/packages/tex.scm (texlive-latex-float): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-fancyvrb.•••* gnu/packages/tex.scm (texlive-latex-fancyvrb): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-fancyhdr.•••* gnu/packages/tex.scm (texlive-latex-fancyhdr): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-fancybox.•••* gnu/packages/tex.scm (texlive-latex-fancybox): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-colortbl.•••* gnu/packages/tex.scm (texlive-latex-colortbl): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-changebar.•••* gnu/packages/tex.scm (texlive-latex-changebar): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-appendix.•••* gnu/packages/tex.scm (texlive-latex-appendix): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-anysize.•••* gnu/packages/tex.scm (texlive-latex-anysize): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-latex-amsfonts.•••* gnu/packages/tex.scm (texlive-latex-amsfonts): New variable. Ricardo Wurmus2017-07-09
* gnu: Add texlive-fonts-amsfonts.•••* gnu/packages/tex.scm (texlive-fonts-amsfonts): New variable. Ricardo Wurmus2017-07-09
* gnu: texlive-generic-ifxetex: Fix description.•••* gnu/packages/tex.scm (texlive-generic-ifxetex)[description]: Fix typo. Ricardo Wurmus2017-07-09
* gnu: texlive-latex-oberdiek: Build ifpdf package.•••* gnu/packages/tex.scm (texlive-latex-oberdiek)[arguments]: Only build the "oberdiek.ins" package (which includes all other packages); patch file to build "ifpdf.dtx" instead of "ifpdf.ins". Ricardo Wurmus2017-07-09
* gnu: texlive-latex-base: Fix xetex and xelatex formats.•••* gnu/packages/tex.scm (texlive-latex-base)[arguments]: Build xetex and xelatex formats with matching interpreters. Ricardo Wurmus2017-07-09
* build-system: texlive: Build union in configure phase.•••This allows us to use texmf.cnf instead of having to set all required environment variables manually. * guix/build/texlive-build-system.scm (configure): New procedure. (build): Simplify. (%standard-phases): Add configure phase. * guix/build-system/texlive.scm (texlive-build): Include (guix build union) in modules. (%texlive-build-system-modules): Likewise. Ricardo Wurmus2017-07-09
* build-system: texlive: Only build packages in the current directory.•••* guix/build/texlive-build-system.scm (build): Use scandir instead of find-files. Ricardo Wurmus2017-07-09
* gnu: deeptools: Update to 2.5.1.•••* gnu/packages/bioinformatics.scm (deeptools): Update to 2.5.1. [arguments]: Remove. [native-inputs]: Use "python-" instead of "python2-" variants. [inputs]: Likewise; add python-py2bit. Ricardo Wurmus2017-07-09
* gnu: Add python-py2bit.•••* gnu/packages/bioinformatics.scm (python-py2bit): New variable. Ricardo Wurmus2017-07-09
* gnu: Add java-jgit-4.2.•••* gnu/packages/version-control.scm (java-jgit-4.2): New variable. Ricardo Wurmus2017-07-09
* gnu: Add java-jgit.•••* gnu/packages/version-control.scm (java-jgit): New variable. Ricardo Wurmus2017-07-09
* gnu: Add java-slf4j-api.•••* gnu/packages/java.scm (java-slf4j-api): New variable. Ricardo Wurmus2017-07-09
* gnu: Add java-javaewah.•••* gnu/packages/java.scm (java-javaewah): New variable. Ricardo Wurmus2017-07-09
* gnu: Add java-classpathx-servletapi•••* gnu/packages/java.scm (java-classpathx-servletapi): New variable. Ricardo Wurmus2017-07-09
* gnu: youtube-dl: Update to 2017.07.09.•••* gnu/packages/video.scm (youtube-dl): Update to 2017.07.09. Tobias Geerinckx-Rice2017-07-09
* gnu: libjpeg-turbo: Update to 1.5.2.•••* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.2. [arguments]<#:phases>: Remove. Marius Bakke2017-07-09
* gnu: you-get: Update to 0.4.775.•••* gnu/packages/video.scm (you-get): Update to 0.4.775. Signed-off-by: Ben Woodcroft <donttrustben@gmail.com> Feng Shu2017-07-09
* gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776.•••This is a followup to commit 95bbaa02aa63bc5eae36f686f1ed9915663aa4cf. See <https://bugs.gnu.org/27621> for more information. Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not possible to graft the newer version in place of the older one. This change leaves CVE-2017-9775 unfixed for now. * gnu/packages/patches/poppler-CVE-2017-9776.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (poppler-0.56.0): Replace with ... (poppler/fixed): ... new variable. (poppler)[replacement]: Replaced with poppler/fixed. Leo Famulari2017-07-09
* gnu: sshuttle: Update to 0.78.3.•••* gnu/packages/vpn.scm (sshuttle): Update to 0.78.3. Tobias Geerinckx-Rice2017-07-09
* gnu: wxmaxima: Update to 17.05.0.•••* gnu/packages/maths.scm (wxmaxima): Update to 17.05.0. [source]: Update URL and add file-name. [native-inputs]: Add autoconf, automake and gettext-minimal. [arguments]: Add 'autoconf' phase. Kei Kebreau2017-07-08
* gnu: font-gnu-unifont: Update to 10.0.04.•••* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.04. Efraim Flashner2017-07-08
* doc: Add note about private-key during offload.•••* doc/guix.texi (Using the Offload Facility): Add note about private-key. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Oleg Pykhalov2017-07-08
* gnu: blast+: Update to 2.6.0.•••* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0. [origin]: Remove bundled pcre. Add patch. [arguments]: Replace paths in run_with_lock.c. Configure with pcre. [inputs]: Add pcre, perl, python. * gnu/packages/patches/blast+-fix-makefile.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2017-07-08
* gnu: maxima: Ensure gcc is available at runtime.•••* gnu/packages/maths.scm (maxima)[inputs]: Add gcc. [arguments]: Use modify-phases syntax. Add 'set-gcc-path' phase. Kei Kebreau2017-07-07
* gnu: perl-dbd-mysql: Update to 4.043.•••* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.043. Leo Famulari2017-07-07
* gnu: python-pyopenssl: Fix test failure on 32-bit platforms.•••* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pyopenssl)[source]: Use it. Marius Bakke2017-07-07
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