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* gnu: python-pika: Update to 0.12.0.Marius Bakke2018-11-24
| | | | * gnu/packages/python.scm (python-pika): Update to 0.12.0.
* gnu: bless: Adjust to zlib static output.Marius Bakke2018-11-24
| | | | | * gnu/packages/bioinformatics.scm (bless)[inputs]: Add ZLIB:STATIC. [arguments]: Adjust #:make-flags accordingly.
* gnu: adb: Fix FTBFS with Glibc 2.28.Marius Bakke2018-11-24
| | | | * gnu/packages/android.scm (adb)[arguments]: Add phase 'glibc-compat'.
* gnu: python2-fasteners: Propagate python2-futures.Marius Bakke2018-11-24
| | | | | * gnu/packages/python.scm (python-fasteners)[properties]: New field. (python2-fasteners)[propagated-inputs]: Add PYTHON2-FUTURES.
* gnu: python2-futures: Update to 3.2.0.Marius Bakke2018-11-24
| | | | * gnu/packages/python.scm (python2-futures): Update to 3.2.0.
* gnu: python2-futures: Disable tests.Marius Bakke2018-11-24
| | | | * gnu/packages/python.scm (python2-futures)[arguments]: Set #:test? #f.
* gnu: python-pycurl: Fix FTBFS from 7b844100464633db5455a3931858bb57c9e529e6.Marius Bakke2018-11-24
| | | | | * gnu/packages/python-web.scm (python-pycurl)[arguments]: Add phase 'configure-tls-backend'.
* gnu: ledger: Fix build with Boost >= 1.68.Marius Bakke2018-11-24
| | | | * gnu/packages/finance.scm (ledger)[arguments]: Add phase 'boost-compat.
* gnu: mosaik: Fix FTBFS from b90289dadc8ee15848ce911a2bdcd3ae8302d58c.Marius Bakke2018-11-24
| | | | * gnu/packages/bioinformatics.scm (mosaik)[inputs]: Add ZLIB:STATIC.
* gnu: python-cheetah: Update to 3.1.0.Marius Bakke2018-11-24
| | | | | | | | * gnu/packages/python.scm (python2-cheetah): Rename to ... (python-cheetah): ... this. Update to 3.1.0. [arguments]: Add custom 'check' phase. [propagated-inputs]: Change PYTHON2-MARKDOWN to PYTHON-MARKDOWN. (python2-cheetah): Rewrite in terms of PACKAGE-WITH-PYTHON2.
* gnu: python2-cheetah: Update home page.Marius Bakke2018-11-24
| | | | * gnu/packages/python.scm (python-cheetah)[home-page]: Update to current.
* gnu: rust: Don't depend on 'git'.Marius Bakke2018-11-24
| | | | | | * gnu/packages/rust.scm (rust-1.19)[inputs]: Remove GIT. (rust-1.20)[arguments]: Disable Cargo tests that require git. (rust-1.26)[arguments]: Likewise.
* gnu: mariadb: Update to 10.1.37 [security fixes].Marius Bakke2018-11-24
| | | | | | | | This release fixes CVE-2018-3282, CVE-2018-3174, CVE-2018-3143, CVE-2018-3156, and CVE-2018-3251. See <https://mariadb.com/kb/en/library/mariadb-10137-release-notes/> for details. * gnu/packages/databases.scm (mariadb): Update to 10.1.37.
* Merge branch 'master' into core-updatesMarius Bakke2018-11-24
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| * gnu: libraw: Update to 0.19.1.Marius Bakke2018-11-24
| | | | | | | | * gnu/packages/photo.scm (libraw): Update to 0.19.1.
| * gnu: libtorrent-rasterbar: Update to 1.1.11.Marius Bakke2018-11-24
| | | | | | | | * gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.11.
| * gnu: Add deluge.Nam Nguyen2018-11-24
| | | | | | | | | | | | | | * gnu/packages/bittorrent.scm (deluge): New variable. Co-authored-by: Mike Rosset <mike.rosset@gmail.com> Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: libtorrent-rasterbar: Compile Python bindings in C++11 mode.Nam Nguyen2018-11-24
| | | | | | | | | | | | | | * gnu/packages/bittorrent.scm (libtorrent-rasterbar)[arguments]: Add phase to substitute setup.py. Co-authored-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: Add python-service-identity.Nam Nguyen2018-11-24
| | | | | | | | | | | | | | * gnu/packages/python-crypto.scm (python-service-identity, python2-service-identity): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: Add emacs-matrix-client.Nicolas Goaziou2018-11-23
| | | | | | | | * gnu/packages/emacs.scm (emacs-matrix-client): New variable.
| * gnu: Add emacs-a.Nicolas Goaziou2018-11-23
| | | | | | | | * gnu/packages/emacs.scm (emacs-a): New variable.
| * gnu: Add emacs-tracking.Nicolas Goaziou2018-11-23
| | | | | | | | * gnu/packages/emacs.scm (emacs-tracking): New variable.
| * gnu: Add emacs-ov.Nicolas Goaziou2018-11-23
| | | | | | | | * gnu/packages/emacs.scm (emacs-ov): New variable.
| * gnu: python-slepc4py: Update to 3.10.0.Paul Garlick2018-11-23
| | | | | | | | | | | | * gnu/packages/maths.scm (python-slepc4py): Update to 3.10.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: python-petsc4py: Update to 3.10.0.Paul Garlick2018-11-23
| | | | | | | | | | | | * gnu/packages/maths.scm (python-petsc4py): Update to 3.10.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: slepc: Update to 3.10.1.Paul Garlick2018-11-23
| | | | | | | | | | | | * gnu/packages/maths.scm (slepc): Update to 3.10.1. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: petsc: Update to 3.10.2Paul Garlick2018-11-23
| | | | | | | | | | | | * gnu/packages/maths.scm (petsc): Update to 3.10.2. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: python-ilinkedlist: Update to 0.4.0.Luther Thompson2018-11-23
| | | | | | | | | | | | * gnu/packages/python.scm (python-ilinkedlist): Update to 0.4.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * build: Binary tarball now populates the "current-guix" profile.Ludovic Courtès2018-11-23
| | | | | | | | | | | | | | | | | | | | | | | | * Makefile.am (guix-binary.%.tar.xz): Pass '--profile-name=current-guix'. Remove glibc and glibc-utf8-locales. * doc/guix.texi (Binary Installation): Update accordingly. * etc/guix-install.sh * etc/guix-install.sh (sys_create_store, sys_enable_guix_daemon) (sys_authorize_build_farms): Likewise. * etc/guix-publish.conf.in, etc/guix-publish.service.in, etc/guix-daemon.conf.in, etc/guix-daemon.service.in: Update file names accordingly.
| * pack: Add '--profile-name'.Ludovic Courtès2018-11-23
| | | | | | | | | | | | | | | | | | | | | | | | * guix/scripts/pack.scm (self-contained-tarball): Add #:profile-name and honor it. (squashfs-image, docker-image): Add #:profile-name. (%default-options): Add 'profile-name'. (%options, show-help): Add "--profile-name". (guix-pack): Honor it. * tests/guix-pack-localstatedir.sh: New file. * Makefile.am (SH_TESTS): Add it. * doc/guix.texi (Invoking guix pack): Document "--profile-name".
| * Update NEWS.Ludovic Courtès2018-11-23
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| * status: Display 'build-remote' events.Ludovic Courtès2018-11-23
| | | | | | | | * guix/status.scm (print-build-event): Add clause for 'build-remote'.
| * Update Guile-SQLite3 URL everywhere.Ludovic Courtès2018-11-23
| | | | | | | | | | | | | | * README: Update Guile-SQLite3 URL. * doc/guix.texi (Requirements): Likewise. * guix/store/database.scm (sqlite-exec): Likewise. * m4/guix.m4 (GUIX_CHECK_GUILE_SQLITE3): Likewise.
| * gnu: emacs-picpocket: Update to 40.Alex Vong2018-11-23
| | | | | | | | | | | | | | Fix version string as well: <https://lists.gnu.org/archive/html/guix-devel/2018-11/msg00286.html>. * gnu/packages/emacs.scm (emacs-picpocket): Update to 40.
| * gnu: xpra: Update to 2.4.2.Rutger Helling2018-11-23
| | | | | | | | * gnu/packages/xorg.scm (xpra): Update to 2.4.2.
| * gnu: Add u-boot-pinebook.Vagrant Cascadian2018-11-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/u-boot-pinebook-a64-update-dts.patch: New file. * gnu/packages/patches/u-boot-pinebook-syscon-node.patch: New file. * gnu/packages/patches/u-boot-pinebook-mmc-calibration.patch: New file. * gnu/packages/patches/u-boot-pinebook-video-bridge.patch: New file. * gnu/packages/patches/u-boot-pinebook-r_i2c-controller.patch: New file. * gnu/packages/patches/u-boot-pinebook-dts.patch: New file. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/bootloaders.scm (u-boot-pinebook): New exported variable. * gnu/bootloader/u-boot.scm (u-boot-pinebook-bootloader): New exported variable. * gnu/system/install.scm (pinebook-installation-os): New exported variable.
| * gnu: ccl: Fix missing command line argument support in wrapper.Pierre Neidhardt2018-11-22
| | | | | | | | * gnu/packages/lisp.scm (ccl): Fix missing command line argument support in wrapper.
| * describe: Add recutils format.Oleg Pykhalov2018-11-22
| | | | | | | | | | | | | | * guix/scripts/describe.scm (channel->recutils): New procedure. (display-checkout-info, display-profile-info): Use this. (%options): Add 'recutils' option. * doc/guix.texi (Invoking guix describe): Document this.
| * describe: Add json format.Oleg Pykhalov2018-11-22
| | | | | | | | | | | | | | * guix/scripts/describe.scm (channel->json): New procedure. (display-checkout-info, display-profile-info): Use this. (%options): Add 'json' option. * doc/guix.texi (Invoking guix describe): Document this.
| * describe: Use a procedure to format output.Oleg Pykhalov2018-11-22
| | | | | | | | | | * guix/scripts/describe.scm (channel->sexp): New procedure. (display-checkout-info, display-profile-info): Use this.
| * gnu: gajim: Rename wrap-program phases.Arun Isaac2018-11-22
| | | | | | | | | | * gnu/packages/messaging.scm (gajim)[arguments]: Rename wrap-program phases to wrap-gi-typelib-path and wrap-gsettings-schema-dir.
| * gnu: supercollider: Update to 3.9.3.Nicolas Goaziou2018-11-22
| | | | | | | | * gnu/packages/audio.scm (supercollider): Update to 3.9.3.
| * gnu: giac-xcas: Add a "doc" outputNicolas Goaziou2018-11-22
| | | | | | | | | | * gnu/packages/algebra.scm (giac-xcas): Add "doc" output. [arguments]: Add phase to install documentation in the appropriate directory.
| * gnu: giac-xcas: Update to 1.5.0-19.Nicolas Goaziou2018-11-22
| | | | | | | | * gnu/packages/algebra.scm (giac-xcas): Update to 1.5.0-19.
| * gnu: ccl: Properly include x86-headers and remove missing "contrib" folder.Pierre Neidhardt2018-11-22
| | | | | | | | | | * gnu/packages/lisp.scm (ccl): Include x86-headers and remove missing "contrib" folder. [home-page]: Use HTTPS.
* | gnu: pt-scotch, pt-scotch32: Add Open MPI setup phase.Ludovic Courtès2018-11-23
| | | | | | | | | | | | * gnu/packages/maths.scm (pt-scotch)[arguments]: Use 'invoke' instead of 'system*'. Add 'mpi-setup' phase. (pt-scotch32)[arguments]: Likewise.
* | gnu: pigx-scrnaseq: Use latest snakemake.Ricardo Wurmus2018-11-23
| | | | | | | | | | * gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace snakemake-4 with snakemake.
* | gnu: pigx-bsseq: Use latest snakemake.Ricardo Wurmus2018-11-23
| | | | | | | | | | * gnu/packages/bioinformatics.scm (pigx-bsseq)[inputs]: Replace snakemake-4 with snakemake.
* | gnu: pigx-chipseq: Use latest snakemake.Ricardo Wurmus2018-11-23
| | | | | | | | | | * gnu/packages/bioinformatics.scm (pigx-chipseq)[inputs]: Replace snakemake-4 with snakemake.
* | gnu: python-gevent: Update to 1.3.7.Ricardo Wurmus2018-11-23
| | | | | | | | | | | | * gnu/packages/python.scm (python-gevent): Update to 1.3.7. [arguments]: Find headers for greenlet in phase "do-not-use-bundled-sources". [propagated-inputs]: Add python-objgraph.
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