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* gnu: nanopolish: Remove bundled library sources.Ricardo Wurmus2019-03-19
| | | | | * gnu/packages/bioinformatics.scm (nanopolish)[source]: Add snippet to remove bundled htslib sources.
* gnu: hyperledger-fabric: Use git tag.Tobias Geerinckx-Rice2019-03-19
| | | | | * gnu/packages/hyperledger.scm (hyperledger-fabric)[source]: Check out the (supposedly immutable) tag instead of the (maintenance) branch.
* gnu: Add emacs-org-re-reveal.Clément Lassieur2019-03-19
| | | | * gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): New variable.
* gnu: emacs-org-reveal: Update to 1cdd088.Clément Lassieur2019-03-19
| | | | * gnu/packages/emacs-xyz.scm (emacs-org-reveal): Update to 1cdd088.
* gnu: emacs-org-reveal: Use git-version and git-file-name.Clément Lassieur2019-03-19
| | | | | * gnu/packages/emacs-xyz.scm (emacs-org-reveal)[version]: Use git-version. [source]: Use git-file-name.
* gnu: Add edgar.nee2019-03-19
| | | | | | * gnu/packages/games.scm (edgar): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: coq-flocq: remove unnecessary return valuesDan Frumin2019-03-19
| | | | | | | * gnu/packages/coq.scm (coq-flocq)[arguments]: Add unnecessary return values after 'invoke' calls. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* pack: Create an empty /home directory for '-f squashfs'.Ludovic Courtès2019-03-19
| | | | | | Fixes <https://bugs.gnu.org/34914>. * guix/scripts/pack.scm (squashfs-image)[build]: Pass "-p /home d 555 0 0".
* pack: Produce relative symlinks when using '-f squashfs'.Ludovic Courtès2019-03-19
| | | | | | | | | Fixes <https://bugs.gnu.org/34913>. * guix/scripts/pack.scm (squashfs-image)[build]: Use 'relative-file-name' when creating SYMLINKS. * guix/scripts/pack.scm (guix-pack): Pass #:relative-symlinks? #t when PACK-FORMAT is 'squashfs.
* gnu: Add python-flint.Andreas Enge2019-03-19
| | | | | | * gnu/packages/algebra.scm (python-flint): New variable. * gnu/packages/patches/python-flint-includes.patch: New file. * gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu: Add rtv.Efraim Flashner2019-03-19
| | | | * gnu/packages/syndication.scm (rtv): New variable.
* gnu: Add python-vcrpy.Efraim Flashner2019-03-19
| | | | * gnu/packages/python-check.scm (python-vcrpy): New variable.
* gnu: MPD: Update to 0.21.6.Leo Famulari2019-03-18
| | | | * gnu/packages/mpd.scm (mpd): Update to 0.21.6.
* gnu: autorandr: Fix typo in synopsis.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/xdisorg.scm (autorandr)[synopsis]: Fix typo.
* gnu: python-biom-format: Fix build.Ricardo Wurmus2019-03-18
| | | | | | * gnu/packages/bioinformatics.scm (python-biom-format)[source]: Remove generated C files. [arguments]: Disable second broken test.
* gnu: python-pyarrow: Update to 0.10.0.Ricardo Wurmus2019-03-18
| | | | | | * gnu/packages/databases.scm (python-pyarrow): Update to 0.10.0. [arguments]: Delete "build" phase. [native-inputs]: Add python-pytest-runner.
* gnu: apache-arrow: Update to 0.10.0.Ricardo Wurmus2019-03-18
| | | | | * gnu/packages/databases.scm (apache-arrow): Update to 0.10.0. [inputs]: Replace jemalloc-4.5.0 with jemalloc.
* gnu: dav1d: Update to 0.2.1.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/video.scm (dav1d): Update to 0.2.1.
* gnu: st: Update to 0.8.2.Tobias Geerinckx-Rice2019-03-18
| | | | | * gnu/packages/suckless.scm (st): Update to 0.8.2. [arguments]: Re-indent.
* gnu: darktable: Update to 2.6.1.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/photo.scm (darktable): Update to 2.6.1.
* gnu: cracklib: Update to 2.9.7.Tobias Geerinckx-Rice2019-03-18
| | | | | | | | * gnu/packages/password-utils.scm (cracklib): Update to 2.9.7. [source]: Remove patches. * gnu/packages/patches/cracklib-CVE-2016-6318.patch, gnu/packages/patches/cracklib-fix-buffer-overflow.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove them.
* gnu: speedtest-cli: Update to 2.1.1.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/networking.scm (speedtest-cli): Update to 2.1.1.
* gnu: ntp: Update to 4.2.8p13.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/ntp.scm (ntp): Update to 4.2.8p13.
* gnu: setbfree: Update to 0.8.8.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/music.scm (setbfree): Update to 0.8.8.
* gnu: Add emacs-xr.Nicolas Goaziou2019-03-18
| | | | * gnu/packages/emacs-xyz.scm (emacs-xr): New variable.
* gnu: arb: Update to 2.16.0.Andreas Enge2019-03-18
| | | | * gnu/packages/algebra.scm (arb): Update to 2.16.0.
* gnu: bwm-ng: Update to 0.6.2.Tobias Geerinckx-Rice2019-03-18
| | | | | | | * gnu/packages/networking.scm (bwm-ng): Update to 0.6.2. [source]: Use GIT-FETCH and GIT-FILE-NAME. [arguments]: Add ‘disable-premature-./configure’ phase. [native-inputs]: Add autoconf and automake.
* gnu: proxychains-ng: Update to 4.14.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/networking.scm (proxychains-ng): Update to 4.14.
* gnu: proxychains-ng: Don't use NAME in source URI.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/networking.scm (proxychains-ng)[source]: Hard-code NAME.
* gnu: petsc: Update to 3.10.4.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/maths.scm (petsc): Update to 3.10.4.
* gnu: bitlbee-discord: Update to 0.4.2.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/messaging.scm (bitlbee-discord): Update to 0.4.2.
* gnu: bitlbee-discord: Don't use unstable tarball.Tobias Geerinckx-Rice2019-03-18
| | | | | * gnu/packages/messaging.scm (bitlbee-discord)[source]: Use GIT-FETCH and GIT-FILE-NAME.
* gnu: gnuplot: Update to 5.2.6.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/maths.scm (gnuplot): Update to 5.2.6.
* gnu: Add bbmap.Ricardo Wurmus2019-03-18
| | | | * gnu/packages/bioinformatics.scm (bbmap): New variable.
* gnu: padthv1: Update to 0.9.6.Ricardo Wurmus2019-03-18
| | | | * gnu/packages/music.scm (padthv1): Update to 0.9.6.
* gnu: samplv1: Update to 0.9.6.Ricardo Wurmus2019-03-18
| | | | * gnu/packages/music.scm (samplv1): Update to 0.9.6.
* gnu: drumkv1: Update to 0.9.6.Ricardo Wurmus2019-03-18
| | | | * gnu/packages/music.scm (drumkv1): Update to 0.9.6.
* gnu: synthv1: Update to 0.9.6.Ricardo Wurmus2019-03-18
| | | | * gnu/packages/music.scm (synthv1): Update to 0.9.6.
* gnu: ngircd: Update to 25.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/messaging.scm (ngircd): Update to 25.
* gnu: ipopt: Update to 3.12.12.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/maths.scm (ipopt): Update to 3.12.12.
* gnu: lua-sec: Update to 0.7.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/lua.scm (lua-sec, lua5.1-sec, lua5.2-sec): Update to 0.7.
* gnu: Go 1.11: Update to 1.11.6.Leo Famulari2019-03-18
| | | | | | * gnu/packages/golang.scm (go-1.11): Update to 1.11.6. [arguments]: Remove the 'tarbomb-workaround' phase and inherit the 'chdir' phase.
* gnu: Add Go 1.12.Katherine Cox-Buday2019-03-18
| | | | | | * gnu/packages/golang.scm (go-1.12): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: mailutils: Add SEARCH CHARSET support.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/mail.scm (mailutils)[inputs]: Add libiconv and libunistring.
* gnu: mailutils: Update to 3.6.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/mail.scm (mailutils): Update to 3.6.
* gnu: fdm: Update to 2.0.Tobias Geerinckx-Rice2019-03-18
| | | | | * gnu/packages/mail.scm (fdm): Update to 2.0. [source]: Remove redundant FILE-NAME.
* gnu: mutt: Update to 1.11.4.Tobias Geerinckx-Rice2019-03-18
| | | | * gnu/packages/mail.scm (mutt): Update to 1.11.4.
* gnu: Add java-openmpi.Ricardo Wurmus2019-03-18
| | | | * gnu/packages/mpi.scm (java-openmpi): New variable.
* gnu: Add go-github-com-burntsushi-lockerGiovanni Biscuolo2019-03-18
| | | | | | * gnu/packages/golang.scm (go-github-com-burntsushi-locker): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add python-shortuuid.Sam2019-03-18
| | | | | | * gnu/packages/python-xyz.scm (python-shortuuid): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
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