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* gnu: Add a tzdata variant for testing purposes.Leo Famulari2017-03-12
| | | | | | | | | | * gnu/packages/base.scm (tzdata-2017a): New variable. * gnu/packages/glib.scm (glib)[inputs]: Remove tzdata. [native-inputs]: Add tzdata-2017a. [arguments]: Add tzdata-2017a to #:disallowed-references. * gnu/packages/statistics.scm (r)[inputs]: Remove tzdata. [native-inputs]: Add tzdata-2017a. [arguments]: Add tzdata-2017a to #:disallowed-references.
* gnu: python@3.5: Fix getentropy() calls on kernels < 3.17.Marius Bakke2017-03-12
| | | | | | | * gnu/packages/patches/python-3.5-getentropy-on-old-kernels.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-3.5, python-minimal, python-minimal-wrapper, python-wrapper)[source]: Use it.
* gnu: python@3.5: Update to 3.5.3.Marius Bakke2017-03-12
| | | | | | | * gnu/packages/python.scm (python-3.5, python-minimal, python-minimal-wrapper, python-wrapper): Update to 3.5.3. * gnu/packages/patches/python-fix-tests.patch: Adjust patch context. * gnu/packages/patches/python-3.5-fix-tests.patch: Likewise. Patch one new test.
* gnu: glib: Avoid failing test caused by changes in the time zone database.Leo Famulari2017-03-09
| | | | | * gnu/packages/glib.scm (glib)[arguments]: Skip a failing test in 'disable-failing-tests' phase.
* gnu: glib: Update to 2.50.3.Leo Famulari2017-03-09
| | | | * gnu/packages/glib.scm (glib): Update to 2.50.3.
* Merge branch 'master' into core-updatesLudovic Courtès2017-03-09
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| * hydra: Really disable 32-to-64-bit cross-builds.Ludovic Courtès2017-03-09
| | | | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/26022>. Reported by Efraim Flashner <efraim@flashner.co.il>. * build-aux/hydra/gnu-system.scm (hydra-jobs)[cross-jobs](from-32-to-64?): Check whether TARGET contains "64" rather than checking whether TARGET ends in "64", which is rarely the case. (same?): Add special case for armhf-linux.
| * gexp: Expose functions to allow creating derivation builders.Roel Janssen2017-03-09
| | | | | | | | | | * guix/gexp.scm: Add load-path-expression and gexp-modules to the public interface of the module. See <http://bugs.gnu.org/26023>.
| * gnu: Add rsnapshot.Thomas Danckaert2017-03-09
| | | | | | | | * gnu/packages/backup.scm (rsnapshot): New variable.
| * gnu: python-fake-factory: Add back missing patch file.Mark H Weaver2017-03-09
| | | | | | | | | | | | | | | | This reverts the removal of "python-fake-factory-fix-build-32bit.patch" by commit ce7911ddae5d30ba73c8c9552b7d4e71268e5db3. * gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: inetutils: Set the $localstatedir.Leo Famulari2017-03-09
| | | | | | | | | | | | | | This is a followup to commit 6f5d28f9d05aaa9743b3aac6bceb2c6323122d2d. * gnu/packages/admin.scm (inetutils)[arguments]: Pass '--localstatedir=/var' to #:configure-flags.
| * gnu: icecat: Add fixes from upstream Firefox ESR 45.8.0.Mark H Weaver2017-03-09
| | | | | | | | | | | | | | | | | | Includes fixes for CVE-2017-5398, CVE-2017-5400, CVE-2017-5401, CVE-2017-5402, CVE-2017-5404, CVE-2017-5405, CVE-2017-5407, CVE-2017-5408, CVE-2017-5409, and CVE-2017-5410. * gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the upstream mozilla-esr45 repository.
| * gnu: icecat: Update to 45.7.0-gnu1.Mark H Weaver2017-03-09
| | | | | | | | | | * gnu/packages/gnuzilla.scm (icecat): Update to 45.7.0-gnu1. Remove patches included in 45.7.0.
| * utils: Use an idiom compatible with both 2.0 and 2.2.Ludovic Courtès2017-03-09
| | | | | | | | | | | | | | | | Fixes a regression introduced in 7447aa36e16fb77f75df4d3369db9c942615632e. Reported by Ricardo Wurmus. * guix/utils.scm: Revert 7447aa36e16fb77f75df4d3369db9c942615632e. Use #:prefix for (ice-9 iconv) to support both 2.0 and 2.2.
| * gnu: r: Remove obsolete configure flags.Ricardo Wurmus2017-03-09
| | | | | | | | * gnu/packages/statistics.scm (r)[arguments]: Remove obsolete configure flags.
| * gnu: r: Update to 3.3.3.Ricardo Wurmus2017-03-09
| | | | | | | | * gnu/packages/statistics.scm (r): Update to 3.3.3.
| * gnu: Add lensfun.Roel Janssen2017-03-08
| | | | | | | | * gnu/packages/photo.scm (lensfun): New variable.
| * utils: Make sure to use the right 'bytevector->string'.Ludovic Courtès2017-03-08
| | | | | | | | | | | | | | In Guile 2.2, (rnrs io ports) exports 'bytevector->string', which conflicts with that of (ice-9 iconv). * guix/utils.scm: Hide 'bytevector->string' from (rnrs io ports).
| * packages: Use PACKAGE@VERSION syntax when reporting ambiguities.Ludovic Courtès2017-03-08
| | | | | | | | | | * gnu/packages.scm (%find-package): Upon ambiguity, use the PACKAGE@VERSION syntax instead of 'package-full-name'.
| * list-runtime-roots: Bufferize the lsof pipe.Ludovic Courtès2017-03-08
| | | | | | | | | | * nix/scripts/list-runtime-roots.in (lsof-roots): Add 'setvbuf' call for PIPE.
| * ui: Don't use '%default-port-encoding' to set the encoding of string ports.Ludovic Courtès2017-03-08
| | | | | | | | | | | | | | | | * guix/ui.scm (right-arrow): Call 'set-port-encoding!' to set PORT's encoding; remove use of 'with-fluids'. This is for compatibility with Guile 2.2 where the encoding of string ports is not influenced by %DEFAULT-PORT-ENCODING. * tests/ui.scm ("show-manifest-transaction"): Likewise.
| * ui: Avoid '_' as a pattern variable in 'match'.Ludovic Courtès2017-03-08
| | | | | | | | | | | | * guix/ui.scm (fill-paragraph): Don't use '_' as a pattern variable since that is shadowed by the top-level '_' binding on Guile 2.2. (show-manifest-transaction): Likewise.
| * download: Update the Savannah mirror list.Ludovic Courtès2017-03-08
| | | | | | | | | | * guix/download.scm (%mirrors) <savannah>: Remove centervenus.com, which seems to be broken. Add download-mirror.sv.gnu.org as a last resort.
| * gnu: Add guile2.2-haunt.Ludovic Courtès2017-03-08
| | | | | | | | * gnu/packages/guile.scm (guile2.2-haunt): New variable.
| * gnu: Add guile2.2-reader.Ludovic Courtès2017-03-08
| | | | | | | | * gnu/packages/guile.scm (guile2.2-reader): New variable.
| * gnu: guile-reader: Update to 0.6.2.Ludovic Courtès2017-03-08
| | | | | | | | | | * gnu/packages/guile.scm (guile-reader): Update to 0.6.2. [arguments]: Remove.
| * tests: Avoid zero-expression 'begin' form.Ludovic Courtès2017-03-08
| | | | | | | | | | * tests/cran.scm ("description->package"): Add body after the expected pattern in 'match'.
| * hash: Close or flush sha256 output ports before calling their 'get' procedure.Ludovic Courtès2017-03-08
| | | | | | | | | | | | | | | | | | | | Slightly different buffering of custom binary output ports in Guile 2.1.7 would lead tests missing 'close-port' or 'force-output' to fail. * tests/hash.scm ("open-sha256-port, hello"): Add call to 'force-output' before call to 'get'. * tests/nar.scm ("write-file puts file in C locale collation order"): Call 'close-port' before calling 'get-hash'.
| * build: Unset 'NIX_BUILD_HOOK' when offloading support is missing.Ludovic Courtès2017-03-08
| | | | | | | | | | * build-aux/pre-inst-env.in: Export 'NIX_BUILD_HOOK' only when nix/scripts/offload is executable; unset it otherwise.
| * services: prosody: Use 'id' to introduce unhygienic top-level identifiers.Ludovic Courtès2017-03-08
| | | | | | | | | | | | * gnu/services/messaging.scm (define-all-configurations): Use 'id' to introduce raw/literal/unhygienic top-level identifiers. Fixes compilation with Guile 2.2.
| * services: prosody: Make sure 'id' is available at expansion time.Ludovic Courtès2017-03-08
| | | | | | | | | | * gnu/services/messaging.scm (id): Use 'define-syntax-rule' instead of 'define' to make sure 'id' is available at expansion time.
| * gnu: Remove unneeded imports.Ludovic Courtès2017-03-08
| | | | | | | | | | * gnu/packages/backup.scm: Remove unneeded (guix build utils) import. * gnu/packages/finance.scm: Likewise.
| * guix archive: Allow compilation with Guile 2.2.Ludovic Courtès2017-03-08
| | | | | | | | | | * guix/scripts/archive.scm (export-from-store): Avoid shadowing the top-level '_'.
| * gnu: inetutils: Enable tests.Maxim Cournoyer2017-03-08
| | | | | | | | | | | | | | | | * gnu/packages/admin.scm (inetutils)[arguments]: Remove '#:tests? #f' and #:configure-flags. [native-inputs]: Add net-tools. Signed-off-by: Leo Famulari <leo@famulari.name>
| * gnu: python-pandas: Fix build on 32-bit.Marius Bakke2017-03-08
| | | | | | | | | | | | * gnu/packages/patches/python-pandas-skip-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pandas, python2-pandas): Use it.
| * gnu: Add python-faker.Marius Bakke2017-03-08
| | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Adjust paths. Also rename to ... * gnu/packages/patches/python-faker-fix-build-32bit.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python.scm (python-faker, python2-faker): New variables. (python-fake-factory)[properties]: Superseded by PYTHON-FAKER. (python2-fake-factory)[properties]: Superseded by PYTHON2-FAKER. (python-orator, python2-orator)[propagated-inputs]: Replace PYTHON-FAKE-FACTORY with PYTHON-FAKER.
| * gnu: python-matplotlib-documentation: Fix build.Thomas Danckaert2017-03-08
| | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-matplotlib-documentation)[native-inputs]: Add python-mock and graphviz. [arguments]: Use separate build and install phases; correctly set latex paper size. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: iperf: Update to 3.1.7.Marius Bakke2017-03-08
| | | | | | | | * gnu/packages/networking.scm (iperf): Update to 3.1.7.
| * gnu: libinput: Update to 1.6.3.Marius Bakke2017-03-08
| | | | | | | | * gnu/packages/freedesktop.scm (libinput, libinput-minimal): Update to 1.6.3.
| * gnu: r: Fix more reproducibility problems.Ricardo Wurmus2017-03-08
| | | | | | | | | | * gnu/packages/statistics.scm (r)[arguments]: Patch locations in the build system that need special treatment for reproducibility.
| * gnu: r: Fix syntax for INSTALL_OPTS.Ricardo Wurmus2017-03-08
| | | | | | | | | | | | | | This is a follow-up to commit 4621acfd8272fa93d0530faa5f015b26a194b587. * gnu/packages/statistics.scm (r)[arguments]: Ensure that "--built-timestamp" appears on the same line as the other INSTALL_OPTS.
| * gnu: bash: Use the bootstrap Guile in 'url-fetch/reset-patch-level'.Ludovic Courtès2017-03-07
| | | | | | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/25775>. Reported by Sirgazil, Ricardo Wurmus, Andy Wingo, and others. * guix/download.scm (in-band-download): Always use GUILE. This reverts 9f05908fb1e3707cae593d94688748294717a546. * gnu/packages/bash.scm (url-fetch/reset-patch-level): Remove #:guile. Pass %BOOTSTRAP-GUILE as #:guile to 'url-fetch'. Remove #:guile-for-build argument in 'gexp->derivation' call.
| * gnu: kdevelop: Upgrade to 5.0.4.Thomas Danckaert2017-03-07
| | | | | | | | | | | | | | * gnu/packages/kde.scm (kdevelop, kdevplatform): Upgrade to 5.0.4. (kdevplatform)[source]: Use kde mirror instead of github. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| * gnu: pcre2: Update to 10.23.Marius Bakke2017-03-07
| | | | | | | | | | | | | | | | * gnu/packages/pcre.scm (pcre2): Update to 10.23. [source]: Remove patch. [arguments]: Add phase to substitute /bin/echo reference. * gnu/packages/patches/pcre2-CVE-2016-3191.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
| * gnu: khal: Update to 0.9.3.Leo Famulari2017-03-07
| | | | | | | | | | * gnu/packages/calendar.scm (khal): Update to 0.9.3. [native-inputs]: Use python-pytest-2.9.2.
| * gnu: gnupg: Update to 2.1.19.Leo Famulari2017-03-07
| | | | | | | | | | | | | | | | | | * gnu/packages/gnupg.scm (gnupg): Update to 2.1.19. [arguments]: Add 'patch-test-paths' phase and remove 'set-gnupg-home' phase. Add '--enable-gnupg-builddir-envvar' to #:configure-flags. [source]: Add 'gnupg-2.1-fix-Y2038-test-failure.patch'. * gnu/packages/patches/gnupg-2.1-fix-Y2038-test-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
| * gnu: Add emacs-yasnippet.Ricardo Wurmus2017-03-07
| | | | | | | | * gnu/packages/emacs.scm (emacs-yasnippet): New variable.
| * gnu: Add basic support for "alpha-linux" systems.Sergei Trofimovich2017-03-07
| | | | | | | | | | | | | | | | | | * gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add "/lib/ld-linux.so.2" as "alpha-linux" ld.so. * gnu/packages/linux.scm (system->linux-architecture): Add "alpha" arch. Signed-off-by: Sergei Trofimovich <slyfox@inbox.ru> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: python-rpy2: Propagate python2-singledispatch.Pjotr Prins2017-03-07
| | | | | | | | | | | | | | * gnu/packages/python.scm (python-rp2)[native-inputs]: Rename to... [propagated-inputs]: ... this. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: java-xz: Update to 1.6.Ricardo Wurmus2017-03-07
| | | | | | | | * gnu/packages/java.scm (java-xz): Update to 1.6.
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