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* gnu: taskwarrior: Update to 2.5.1Tomáš Čech2016-05-31
| | | | * gnu/packages/task-management.scm (taskwarrior): Update to 2.5.1.
* gnu: Add py3status.Tomáš Čech2016-05-31
| | | | * gnu/packages/python.scm (python-py3status): New variable.
* gnu: nginx: Update to 1.10.1 [Fixes CVE-2016-4450].Efraim Flashner2016-05-31
| | | | * gnu/packages/web.scm (nginx): Update to 1.10.1.
* gnu: autogen: Use 'modify-phases'.Efraim Flashner2016-05-31
| | | | * gnu/packages/autogen.scm (autogen)[arguments]: Use 'modify-phases'.
* gnu: autogen: Update to 5.18.10.Efraim Flashner2016-05-31
| | | | * gnu/packages/autogen.scm (autogen): Update to 5.18.10.
* gnu: scrot: Use 'modify-phases'.Efraim Flashner2016-05-31
| | | | * gnu/packages/xdisorg.scm (scrot)[arguments]: Use 'modify-phases'.
* gnu: scrot: Fix typo in source uri.Efraim Flashner2016-05-31
| | | | | | * gnu/packages/xdisorg.scm (scrot)[source]: Fix typo in uri. This is a follow-up to 9da459f350709af0cd92c3eb7ddd459eda5959dd.
* gnu: emms: Use 'modify-phases'.Efraim Flashner2016-05-31
| | | | * gnu/packages/emacs.scm (emms)[arguments]: Use 'modify-phases'.
* gnu: emms: Update to 4.1.Efraim Flashner2016-05-31
| | | | * gnu/packages/emacs.scm (emms): Update to 4.1.
* gnu: librecad: Update to 2.0.11.Efraim Flashner2016-05-31
| | | | * gnu/packages/engineering.scm (librecad): Update to 2.0.11.
* gnu: dosfstools: Update to 4.0.Efraim Flashner2016-05-31
| | | | | * gnu/packages/disk.scm (dosfstools): Update to 4.0. [arguments]: Re-enable the 'configure phase.
* gnu: microscheme: Update to 0.9.3.Efraim Flashner2016-05-31
| | | | * gnu/packages/avr.scm (microscheme): Update to 0.9.3.
* gnu: munge: Update to 0.5.12.Efraim Flashner2016-05-31
| | | | * gnu/packages/admin.scm (munge): Update to 0.5.12.
* import github: Add to extension list.Efraim Flashner2016-05-31
| | | | * guix/import/github.scm (find-extension): Add '.tgz' extension.
* gnu: obs: Update to 0.14.2.Efraim Flashner2016-05-31
| | | | * gnu/packages/video.scm (obs): Update to 0.14.2.
* gnu: emacs-better-defaults: Specify source file name.David Thompson2016-05-31
| | | | | * gnu/packages/emacs.scm (emacs-better-defaults)[source]: Specify a useful file name, as usual with tarballs from GitHub.
* gnu: imagemagick: Fix CVE-2016-5118.Leo Famulari2016-05-31
| | | | | | * gnu/packages/patches/imagemagick-CVE-2016-5118.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/imagemagick.scm (imagemagick): Use it.
* gnu: graphicsmagick: Update to 1.3.24 [security update].Leo Famulari2016-05-31
| | | | | | | | | | Fixes CVE-2016-{2317, 2318, 5118} and many other security issues described in 'NEWS.txt'. * gnu/packages/patches/graphicsmagick-CVE-2016-5118.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.24. [source]: Remove patch.
* daemon: Substitute queries return immediately when substitutes are disabled.Ludovic Courtès2016-05-31
| | | | | | | | | | | | | Reported by Federico Beffa <beffa@ieee.org> at <https://lists.gnu.org/archive/html/guix-devel/2016-05/msg00928.html>. * nix/libstore/local-store.cc (LocalStore::querySubstitutablePaths) (LocalStore::querySubstitutablePathInfos): Return when 'settings.useSubstitutes' is false. * tests/store.scm ("references/substitutes missing reference info"): Make sure to return #f on failure. * tests/store.scm ("substitutable-path-info when substitutes are turned off"): ("substitutable-paths when substitutes are turned off"): New tests.
* daemon: Fix typo.Ludovic Courtès2016-05-31
| | | | | | | | Fixes a regression/typo introduced in e08380fb6cefd3fd67c3c220a3ddaf385e6413cf. * nix/libstore/build.cc (DerivationGoal::startBuilder): Canonicalize "/tmp", not "/tmp/guix-build".
* offload: Use (guix build syscalls).Ludovic Courtès2016-05-31
| | | | | | This is a followup to 4e0ea3eb288c2143b44bf324c64047762c72d3b3. * guix/scripts/offload.scm: Use (guix build syscalls).
* daemon: Remove unused XML output code.Ludovic Courtès2016-05-31
| | | | | | * nix/local.mk (libutil_a_SOURCES): Remove libutil/xml-writer.cc. (libutil_headers): Remove libutil/xml-writer.hh. * nix/libutil/xml-writer.hh, nix/libutil/xml-writer.cc: Remove.
* gnu: Add ghmm.Ricardo Wurmus2016-05-31
| | | | * gnu/packages/machine-learning.scm (ghmm): New variable.
* gnu: gimp: Update to 2.8.16.Efraim Flashner2016-05-31
| | | | * gnu/packages/gimp.scm (gimp): Update to 2.8.16.
* gnu: Add r-genomationdata.Ricardo Wurmus2016-05-31
| | | | * gnu/packages/bioinformatics.scm (r-genomationdata): New variable.
* gnu: Add r-runit.Ricardo Wurmus2016-05-31
| | | | * gnu/packages/statistics.scm (r-runit): New variable.
* gnu: julia: Update to 0.4.5.Ricardo Wurmus2016-05-31
| | | | | * gnu/packages/julia.scm (julia): Update to 0.4.5. (libuv-julia): Update commit.
* gnu: Add r-knitrbootstrap.Ricardo Wurmus2016-05-31
| | | | * gnu/packages/statistics.scm (r-knitrbootstrap): New variable.
* daemon: rounds: Keep the differing output if -K is given.Eelco Dolstra2016-05-31
| | | | Regardless of -K, we now also print which output differs.
* daemon: Canonicalize gids to 0.Eelco Dolstra2016-05-31
| | | | | | | Previously files in the Nix store were owned by root or by nixbld, depending on whether they were created by a substituter or by a builder. This doesn't matter much, but causes spurious diffoscope differences. So use root everywhere.
* daemon: check: Keep the differing output if -K is given.Eelco Dolstra2016-05-31
| | | | | | | | | | | | | | | | | | | This makes it easier to investigate the non-determinism, e.g. $ nix-build pkgs/stdenv/linux -A stage1.pkgs.zlib --check -K error: derivation ‘/nix/store/l54i8wlw22656i4pk05c52ngv9rpl39q-zlib-1.2.8.drv’ may not be deterministic: output ‘/nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8’ differs from ‘/nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8-check’ $ diffoscope /nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8 /nix/store/11a27shh6n2ivi4a7s964i65ql80cf27-zlib-1.2.8-check ... ├── lib/libz.a │ ├── metadata │ │ @@ -1,15 +1,15 @@ │ │ -rw-r--r-- 30001/30000 3096 Jan 12 15:20 2016 adler32.o ... │ │ +rw-r--r-- 30001/30000 3096 Jan 12 15:28 2016 adler32.o ... Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* daemon: check: Fix "failed to produce output path".Eelco Dolstra2016-05-31
| | | | | This occured when sandbox building is disabled, at least one output exists, and at least one other output does not.
* daemon: check: Fix assertion failure when some outputs are missing.Eelco Dolstra2016-05-31
| | | | | | | | | | | E.g. $ nix-build pkgs/stdenv/linux/ -A stage1.pkgs.perl --check nix-store: src/libstore/build.cc:1323: void nix::DerivationGoal::tryToBuild(): Assertion `buildMode != bmCheck || validPaths.size() == drv->outputs.size()' failed. when perl.out exists but perl.man doesn't. The fix is to only check the outputs that exist. Note that "nix-build -A stage1.pkgs.all --check" will still give a (proper) error in this case.
* daemon: When repairing, rebuild if there is no substituter.Eelco Dolstra2016-05-31
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* daemon: Fix --repair failure on multiple-output derivations.Eelco Dolstra2016-05-31
| | | | | | | | | | If repair found a corrupted/missing path that depended on a multiple-output derivation, and some of the outputs of the latter were not present, it failed with a message like error: path ‘/nix/store/cnfn9d5fjys1y93cz9shld2xwaibd7nn-bash-4.3-p42-doc’ is not valid Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* daemon: ~PathLocks(): Handle exceptions.Eelco Dolstra2016-05-31
| | | | | | Otherwise, since the call to write a "d" character to the lock file can fail with ENOSPC, we can get an unhandled exception resulting in a call to terminate().
* daemon: Handle /tmp being a symlink.Eelco Dolstra2016-05-31
| | | | | * nix/libstore/build.cc (DerivationGoal::startBuilder): Call 'canonPath' on "/tmp".
* services: urandom-seed: Set umask to 077 while shutting down.Leo Famulari2016-05-31
| | | | * gnu/services/base.scm (urandom-seed-shepherd-service): Call 'umask'.
* gnu: libxml2: Update replacement to 2.9.4 [security fixes].Leo Famulari2016-05-30
| | | | | | | | | | | This fixes CVE-2016-{1762, 1833, 1834, 1835, 1836, 1837, 1838, 1839, 1840, 3627, 3705, 4483}. * gnu/packages/patches/libxml2-CVE-2016-3627.patch, gnu/packages/patches/libxml2-CVE-2016-3705.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/xml.scm (libxml2/fixed): Update to 2.9.4. [source]: Remove patches.
* container: Gracefully report mount errors in the child process.Ludovic Courtès2016-05-31
| | | | | | | | | | | | | Fixes <http://bugs.gnu.org/23306>. * gnu/build/linux-container.scm (run-container): Use 'socketpair' instead of 'pipe'. Rename 'in' to 'child' and 'out' to 'parent'. Send a 'ready message or an exception argument list from the child to the parent; adjust the parent accordingly. * tests/containers.scm ("call-with-container, mnt namespace, wrong bind mount"): New test. * tests/guix-environment-container.sh: Add test with --expose=/does-not-exist.
* container: Gracefully handle failure to set up user namespaces.Ludovic Courtès2016-05-31
| | | | | * gnu/build/linux-container.scm (run-container): Exit when the parent process doesn't say 'ready.
* download: Update CPAN mirrors.Efraim Flashner2016-05-31
| | | | * guix/download.scm (mirrors)[cpan]: Add to mirror list.
* gnu: vapoursynth: Update to 32.Efraim Flashner2016-05-30
| | | | * gnu/packages/video.scm (vapoursynth): Update to 32.
* gnu: Add zimg.Efraim Flashner2016-05-30
| | | | * gnu/packages/image.scm (zimg): New variable.
* gnu: mcrypt: Fix CVE-2012-4409, CVE-2012-4426, CVE-2012-4527.Efraim Flashner2016-05-30
| | | | | | | | * gnu/packages/mcrypt.scm (mcrypt)[source]: Add patches. * gnu/packages/patches/mcrypt-CVE-2012-4409.patch, gnu/packages/patches/mcrypt-CVE-2012-4426.patch, gnu/packages/patches/mcrypt-CVE-2012-4527.patch: New variables. * gnu/local.mk (dist_patch_DATA): Add them.
* gnu: imagemagick: Update to 6.9.4-5.Leo Famulari2016-05-30
| | | | * gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.4-5.
* gnu: Remove xgcc-avr.David Thompson2016-05-30
| | | | | | | We now have a dedicated package module for the AVR toolchain with important modifications on top of what cross-gcc produces. * gnu/packages/cross-base.scm (xgcc-avr): Delete.
* gnu: Add avr-toolchain.David Thompson2016-05-30
| | | | | * gnu/packages/avr.scm (avr-toolchain): New procedure. (avr-toolchain-4.9, avr-toolchain-5): New variables.
* gnu: avr-libc: Update to 2.0.0.David Thompson2016-05-30
| | | | * gnu/packages/avr.scm (avr-libc): Update to 2.0.0.
* gnu: avr-libc: Fix build.David Thompson2016-05-30
| | | | | | * gnu/packages/avr.scm (avr-libc): Update to 2.0.0. [native-inputs]: Use new avr-gcc and avr-binutils. [arguments]: Add phase to unset C_INCLUDE_PATH.
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