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* gnu: r-ranger: Update to 0.12.1.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-ranger): Update to 0.12.1.
* gnu: r-modelmetrics: Update to 1.2.2.1.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-modelmetrics): Update to 1.2.2.1.
* gnu: r-prabclus: Update to 2.3-2.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-prabclus): Update to 2.3-2.
* gnu: r-statmod: Update to 1.4.33.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-statmod): Update to 1.4.33.
* gnu: r-zoo: Update to 1.8-7.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-zoo): Update to 1.8-7.
* gnu: r-gplots: Update to 3.0.1.2.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-gplots): Update to 3.0.1.2.
* gnu: r-rsqlite: Update to 2.2.0.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.0.
* gnu: r-catools: Update to 1.17.1.4.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-catools): Update to 1.17.1.4.
* gnu: r-hms: Update to 0.5.3.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-hms): Update to 0.5.3.
* gnu: r-bh: Update to 1.72.0-3.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-bh): Update to 1.72.0-3.
* gnu: r-stringi: Update to 1.4.5.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-stringi): Update to 1.4.5.
* gnu: r-bit: Update to 1.1-15.1.Ricardo Wurmus2020-01-16
| | | | * gnu/packages/statistics.scm (r-bit): Update to 1.1-15.1.
* gnu: r-mvtnorm: Update to 1.0-12.Ricardo Wurmus2020-01-16
| | | | | | * gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-12. [inputs]: Move gfortran from here... [native-inputs]: ...to here.
* gnu: r-caret: Update to 6.0-85.Ricardo Wurmus2020-01-16
| | | | | * gnu/packages/cran.scm (r-caret): Update to 6.0-85. [propagated-inputs]: Add r-proc.
* gnu: r-caret: Do not abbreviate "misc".Ricardo Wurmus2020-01-16
| | | | | * gnu/packages/cran.scm (r-caret)[description]: Replace "misc" with "miscellaneous".
* gnu: r-caret: Move to (gnu packages cran).Ricardo Wurmus2020-01-16
| | | | | * gnu/packages/statistics.scm (r-caret): Move variable from here... * gnu/packages/cran.scm (r-caret): ...to here.
* gnu: icecat: Fix support for ffmpeg codecs.Mark H Weaver2020-01-16
| | | | | | | | | | | | | Fixes <https://bugs.gnu.org/38045>. Thanks to Jakub Kądziołka <kuba@kadziolka.net> and Amin Bandali <bandali@gnu.org> for their helpful observations and suggestions. This is a followup to commit 8e5567195f5d29301d571612085b5afdb460619d. * gnu/packages/gnuzilla.scm (icecat)[inputs]: Add shared-mime-info. [arguments]: Add elf and binary I/O modules to #:modules. Add code to the 'fix-ffmpeg-runtime-linker' phase that sets the sandbox read-path whitelist to include libavcodec's RUNPATH, as well as shared-mime-info.
* gnu: red-eclipse: Update to 2.0.0.Kei Kebreau2020-01-15
| | | | | | | | | | | * gnu/packages/games.scm (red-eclipse): Update to 2.0.0. [source]: Remove obsolete patch, and fetch submodules by making "recursive?" true. [arguments]: Remove "unpack-data" phase and adjust "add-store-data-package-path-as-default" phase. [inputs]: Add freetype and remove data-sources. * gnu/packages/patches/red-eclipse-remove-gamma-name-hack.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Delete file.
* clojure-utils: Avoid use of '@@'.Ludovic Courtès2020-01-15
| | | | | | * guix/build/clojure-utils.scm (%doc-regex): Avoid @@, which doesn't work on Guile 3. (file-sans-extension): Likewise.
* serialize: Export 'dump-port*'.Ludovic Courtès2020-01-15
| | | | | * guix/serialization.scm (dump): Export as 'dump-port*'. * guix/scripts/challenge.scm (dump-port*): Remove.
* gnu: Add rcm.Josh Holland2020-01-15
| | | | | | | * gnu/packages/rcm.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add rcm.scm. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add sushi.Raghav Gururajan2020-01-15
| | | | | | * gnu/packages/gnome.scm (sushi): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add rygel.Raghav Gururajan2020-01-15
| | | | | | * gnu/packages/gnome.scm (rygel): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add libnma.Raghav Gururajan2020-01-15
| | | | | | * gnu/packages/gnome.scm (libnma): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add liquid-dsp.Christopher Howard2020-01-15
| | | | | | | * gnu/packages/sdr.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: emacs-telega: Update to 0.5.4-4.Brett Gilio2020-01-15
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.4-4. [propagated-inputs]: Add emacs-company to provide completions in telega-based buffers.
* gnu: mpop: Mark up description.Tobias Geerinckx-Rice2020-01-15
| | | | * gnu/packages/mail.scm (mpop)[description]: Use @acronym.
* gnu: mercurial: Raise test time-outs.Tobias Geerinckx-Rice2020-01-15
| | | | | | | Let Guix handle them. Fixes <https://paste.debian.net/plain/1126159>. * gnu/packages/version-control.scm (mercurial)[arguments]: Raise individual test time-outs to 1 day.
* gnu: Add manuskript.Nicolas Goaziou2020-01-15
| | | | * gnu/packages/text-editors.scm (manuskript): New variable.
* gnu: mercurial: Run tests verbosely and respect settings.Tobias Geerinckx-Rice2020-01-15
| | | | | | * gnu/packages/version-control.scm (mercurial)[arguments]: Invoke ‘run-tests.py’ directly and verbosely. Respect #:tests? and parallel-job-count.
* gnu: mpop: Update to 1.4.7.Tobias Geerinckx-Rice2020-01-15
| | | | * gnu/packages/mail.scm (mpop): Update to 1.4.7.
* gnu: mpop: Remove unnecessary libidn input.Tobias Geerinckx-Rice2020-01-15
| | | | gnu/packages/mail.scm (mpop)[inputs]: Remove libidn.
* gnu: asymptote: Update to 2.62.Nicolas Goaziou2020-01-15
| | | | * gnu/packages/plotutils.scm (asymptote): Update to 2.62.
* gnu: Add python-xmlschema.Marius Bakke2020-01-15
| | | | * gnu/packages/xml.scm (python-xmlschema): New public variable.
* gnu: python-lxml: Move to (gnu packages xml).Marius Bakke2020-01-15
| | | | | | | | | | * gnu/packages/python-xyz.scm (python-lxml): Move from here ... * gnu/packages/xml.scm (python-lxml): ... to here. * gnu/packages/django.scm, gnu/packages/drones.scm, gnu/packages/libreoffice.scm, gnu/packages/nutrition.scm, gnu/packages/openstack.scm, gnu/packages/pulseaudio.scm, gnu/packages/python-science.scm, gnu/packages/tryton.scm, gnu/packages/wireservice.scm: Adjust module imports.
* gnu: python-elementpath: Update to 1.3.3.Marius Bakke2020-01-15
| | | | * gnu/packages/xml.scm (python-elementpath): Update to 1.3.3.
* gnu: python-elementpath: Move to (gnu packages xml).Marius Bakke2020-01-15
| | | | | * gnu/packages/python-xyz.scm (python-elementpath): Move from here ... * gnu/packages/xml.scm (python-elementpath): ... to here.
* gnu: Add python2-importlib-metadata.Marius Bakke2020-01-15
| | | | * gnu/packages/python-xyz.scm (python2-importlib-metadata): New public variable.
* gnu: Add python2-zipp.Marius Bakke2020-01-15
| | | | * gnu/packages/python-compression.scm (python2-zipp): New public variable.
* gnu: Add python2-importlib-resources.Marius Bakke2020-01-15
| | | | * gnu/packages/python-xyz.scm (python2-importlib-resources): New public variable.
* gnu: python-wheel: Update to 0.33.6.Marius Bakke2020-01-15
| | | | | | | * gnu/packages/python-xyz.scm (python-wheel): Update to 0.33.6. [arguments]: Explicitly disable tests (they never ran before). [native-inputs, properties]: Remove. (python2-wheel): Use PACKAGE-WITH-PYTHON2.
* gnu: python-zipp: Update to 1.0.0.Marius Bakke2020-01-15
| | | | | | | * gnu/packages/python-compression.scm (python-zipp): Update to 1.0.0. [propagated-inputs]: Remove PYTHON-RST.LINKER. Add PYTHON-MORE-ITERTOOLS. Move PYTHON-CONTEXTLIB2 and PYTHON-PATHLIB2 ... [native-inputs]: ... here. Remove PYTHON-SPHINX.
* gnu: python-importlib-metadata: Update to 1.4.0.Marius Bakke2020-01-15
| | | | | | | * gnu/packages/python-xyz.scm (python-importlib-metadata): Update to 1.4.0. [propagated-inputs]: Remove PYTHON-CONFIGPARSER, PYTHON-CONTEXTLIB2, PYTHON-DOCUTILS, PYTHON-PATHLIB2, and PYTHON-RST.LINKER. [native-inputs]: Remove PYTHON-SPHINX. Add PYTHON-PACKAGING.
* gnu: python-pytest-checkdocs: Add missing input.Marius Bakke2020-01-15
| | | | | * gnu/packages/python-check.scm (python-pytest-checkdocs)[propagated-inputs]: Add PYTHON-DOCUTILS.
* gnu: python-sortedcontainers: Update to 2.1.0.Marius Bakke2020-01-15
| | | | * gnu/packages/python-xyz.scm (python-sortedcontainers): Update to 2.1.0.
* gnu: popt: Add a source file name.Marius Bakke2020-01-15
| | | | * gnu/packages/popt.scm (popt)[source](file-name): New field.
* gnu: guix: Update to 4aea90b.Ludovic Courtès2020-01-15
| | | | * gnu/packages/package-management.scm (guix): Update to 4aea90b.
* import: cpan: Rewrite tests to use an HTTP server instead of mocking.Ludovic Courtès2020-01-15
| | | | | | | * guix/import/cpan.scm (%metacpan-base-url): New variable. (module->dist-name, cpan-fetch): Refer to it instead of the hard-coded URL. * tests/cpan.scm ("cpan->guix-package"): Use 'with-http-server' instead of 'mock'.
* import: cpan: Rewrite to use 'define-json-mapping'.Ludovic Courtès2020-01-15
| | | | | | | | | | | | | | | | | | | | * guix/import/cpan.scm (<cpan-dependency>, <cpan-release>): New JSON-mapped record types. (metacpan-url->mirror-url): New procedure. (cpan-source-url): Rewrite in terms of it. (cpan-version): Remove. (cpan-module->sexp): Rewrite to take a <cpan-release> instead of an alist, and rename 'meta' to 'release'. [convert-inputs]: Rewrite to use 'cpan-release-dependencies'. Update calls to 'convert-inputs' to pass a list of symbols. Replace 'assoc-ref' calls with the appropriate field accessors. (cpan->guix-package): Rename 'module-meta' to 'release'. (latest-release): Likewise, and use the appropriate accessors. * tests/cpan.scm (test-json): Remove "prereqs" record; add "dependency" list. ("source-url-http", "source-url-https"): Remove. ("metacpan-url->mirror-url, http") ("metacpan-url->mirror-url, https"): New tests.
* More module autoload adjustments.Ludovic Courtès2020-01-15
| | | | | | | | This is a followup to 7a0836cffdfe3ab9ee899602f218277646959144. * guix/scripts/package.scm: Adjust binding list of the (guix store roots) autoload. * guix/inferior.scm: Adjust binding list of the (guix cache) autoload.
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