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* gnu: Add r-motifrg.Ricardo Wurmus2016-04-11
| | | | * gnu/packages/bioinformatics.scm (r-motifrg): New variable.
* gnu: Add r-bsgenome-hsapiens-ucsc-hg19.Ricardo Wurmus2016-04-11
| | | | | * gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19): New variable.
* gnu: Add r-seqlogo.Ricardo Wurmus2016-04-11
| | | | * gnu/packages/bioinformatics.scm (r-seqlogo): New variable.
* gnu: borg: Update to 1.0.1.Leo Famulari2016-04-11
| | | | * gnu/packages/backup.scm (borg): Update to 1.0.1.
* gnu: vdirsyncer: Update to 0.9.3.Leo Famulari2016-04-10
| | | | * gnu/packages/dav.scm (vdirsyncer): Update to 0.9.3.
* gnu: python-werkzeug: Update to 0.11.5.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-werkzeug): Update to 0.11.5.
* gnu: python-pytest-localserver: Change inputs.Efraim Flashner2016-04-10
| | | | | | | | | * gnu/packages/python.scm (python-pytest-localserver)[native-inputs]: Remove zip. [proapgated-inputs]: Move python-werkzeug ... [inputs]: ... to here. [propagated-inputs]: Move python-pytest, python-requests, python-six ... [native-inputs]: ... to here.
* gnu: python-pytest-cache: Change inputs.Efraim Flashner2016-04-10
| | | | | | * gnu/packages/python.scm (python-pytest-cache)[propagated-inputs]: Move python-execnet ... [inputs]: ... to here. Add python-apipkg, python-py, python-pytest.
* gnu: python-execnet: Change inputs.Efraim Flashner2016-04-10
| | | | | | * gnu/packages/python.scm (python-execnet)[propagated-inputs]: Move python-apipkg ... [inputs]: ... to here.
* gnu: python-apipkg: Change inputs.Efraim Flashner2016-04-10
| | | | | | * gnu/packages/python.scm (python-apipkg)[native-inputs]: Move python-pytest. [inputs]: ... to here.
* gnu: python-pytest-xdist: Change inputs.Efraim Flashner2016-04-10
| | | | | | | | | | * gnu/packages/python.scm (python-pytest-xdist)[native-inputs]: Remove python-setuptools. [propagated-inputs]: Move python-execnet, python-py, python-pytest ... [inputs]: ... to here. Add python-apipkg. [properties]: Define python2-pytest-xdist. (python2-pytest-xdist): Build with 'strip-python2-variant'. [native-inputs]: Add python2-setuptools.
* gnu: python-pytest-runner: Define python2-pytest-runner.Efraim Flashner2016-04-10
| | | | | | | | * gnu/packages/python.scm (python-pytest-runner)[properties]: Define python2-pytest-runner. [native-inputs]: Remove python-setuptools. [home-page]: Project has moved to Github. (python2-pytest-runner)[native-inputs]: Add python2-setuptools.
* gnu: python-pytest-cov: Update to 2.2.1.Efraim Flashner2016-04-10
| | | | | | | | | | * gnu/packages/python.scm (python-pytest-cov): Update to 2.2.1. [native-inputs]: Remove python-setuptools. Move python-coverage, python-pytest ... [inputs]: ... to here. [properties]: Define python2-pytest-cov. (python-pytest-cov): Build with 'strip-python2-variant'. [inputs]: Add python2-setuptools.
* gnu: python-parse: Update to 1.6.6.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-parse): Update to 1.6.6.
* gnu: python-tzlocal: Update to 1.2.2.Efraim Flashner2016-04-10
| | | | | | * gnu/packages/python.scm (python-tzlocal): Update to 1.2.2. [native-inputs]: Move python-pytz ... [inputs]: ... to here.
* gnu: python-parsedatetime: Update to 2.1.Efraim Flashner2016-04-10
| | | | | | | | * gnu/packages/python.scm (parsedatetime): Update to 2.1. [native-inputs]: Remove python-setuptools, add python-nose, python-pyicu. [properties]: Define python2-variant. (python2-parsedatetime): Build with 'strip-python2-variant'. [native-inputs]: Add python2-setuptools.
* gnu: python-dateutil-2: Update to 2.5.2.Efraim Flashner2016-04-10
| | | | | | | | * gnu/packages/python.scm (python-dateutil-2): Update to 2.5.2. [inputs]: Remove python-setuptools. [properties]: Define python2-dateutil-2. (python2-dateutil-2): Build with 'strip-python2-variant'. [inputs]: Add python2-setuptools.
* gnu: python-keyring: Update to 8.7.Efraim Flashner2016-04-10
| | | | | | | | * gnu/packages/python.scm (python-keyring): Update to 8.7. [native-inputs]: Remove python-setuptools, python-mock. [properties]: Define python2-keyring. (python2-keyring): Build with 'strip-python2-variant'. [native-inputs]: Add python2-setuptools.
* gnu: python-h5py: Update to 2.6.0.Efraim Flashner2016-04-10
| | | | | | | * gnu/packages/python.scm (python-h5py): Update to 2.6.0. [inputs]: Add python-six. [native-inputs]: Add python-pkgconfig. [properties]: Define python2-h5py.
* gnu: python-pytz: Update to 2016.3.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-pytz): Update to 2016.3.
* gnu: python-babel: Update to 2.3.2.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-babel): Update to 2.3.2.
* gnu: python-ccm: Update to 2.1.6.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-ccm): Update to 2.1.6.
* gnu: python-httplib2: Update to 0.9.2.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-httplib2): Update to 0.9.2.
* gnu: python-paramiko: Update to 1.16.0.Efraim Flashner2016-04-10
| | | | * gnu/packages/python.scm (python-paramiko): Update to 1.16.0.
* gnu: youtube-dl: Update to 2016.04.06.Efraim Flashner2016-04-10
| | | | | * gnu/packages/video.scm (youtube-dl): Update to 2016.04.06. [native-inputs]: Remove python-setuptools.
* gnu: python-requests: Rearrange inputs.Efraim Flashner2016-04-10
| | | | | | * gnu/packages/python.scm (python-requests)[propagated-inputs]: Move python-py, python-pytest, python-pytest-cov, python-wheel from here... [native-inputs]: ... to here.
* gnu: livestreamer: Remove extra inputs.Efraim Flashner2016-04-10
| | | | | | * gnu/packages/video.scm (livestreamer)[native-inputs]: Remove python-setuptools. [propagated-inputs]: Remove python-singledispatch.
* gnu: offlineimap: Add sqlite support.Efraim Flashner2016-04-10
| | | | | * gnu/packages/mail.scm (offlineimap)[inputs]: Add python2-pysqlite. [arguments]: Wrap binary with python2-pysqlite's path.
* gnu: icecat: Update to 38.7.1-gnu1.Efraim Flashner2016-04-10
| | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/gnuzilla.scm (icecat): Update to 38.7.1-gnu1. [sources]: Remove numerous patches. * gnu/packages/patches/icecat-CVE-2015-4477.patch, gnu/packages/patches/icecat-CVE-2015-7207.patch, gnu/packages/patches/icecat-CVE-2016-1952-pt01.patch, gnu/packages/patches/icecat-CVE-2016-1952-pt02.patch, gnu/packages/patches/icecat-CVE-2016-1952-pt03.patch, gnu/packages/patches/icecat-CVE-2016-1952-pt04.patch, gnu/packages/patches/icecat-CVE-2016-1952-pt05.patch, gnu/packages/patches/icecat-CVE-2016-1952-pt06.patch, gnu/packages/patches/icecat-CVE-2016-1954.patch, gnu/packages/patches/icecat-CVE-2016-1960.patch, gnu/packages/patches/icecat-CVE-2016-1961.patch, gnu/packages/patches/icecat-CVE-2016-1962.patch, gnu/packages/patches/icecat-CVE-2016-1964.patch, gnu/packages/patches/icecat-CVE-2016-1965.patch, gnu/packages/patches/icecat-CVE-2016-1966.patch, gnu/packages/patches/icecat-CVE-2016-1974.patch, gnu/packages/patches/icecat-icecatbug-1248851.patch, gnu/packages/patches/icecat-update-graphite2.patch, gnu/packages/patches/icecat-update-graphite2-pt2.patch: Remove files. * gnu-system.am (dist_patch_DATA): Remove them.
* gnu: Add c-graph.John Darrington2016-04-09
| | | | * gnu/packages/maths.scm (c-graph): New variable.
* gnu: Add ibus-anthy.Chris Marusich2016-04-09
| | | | | | * gnu/packages/ibus.scm (ibus-anthy): New variable. Co-authored-by: 宋文武 <iyzsong@gmail.com>.
* gnu: Add anthy.Chris Marusich2016-04-09
| | | | | | | * gnu/packages/anthy.scm: New file. * gnu-system.am: Add it. Signed-off-by: 宋文武 <iyzsong@gmail.com>
* gnu: Add wmclock.Kei Yamashita2016-04-08
| | | | | | * gnu/packages/gnustep.scm (wmclock): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: pcre2: Update to 10.21.McKinley Olsen2016-04-08
| | | | | | gnu/packages/pcre.scm (pcre2): Update to 10.21. Signed-off-by: 宋文武 <iyzsong@gmail.com>
* gnu: singular: Update hash.Andreas Enge2016-04-08
| | | | | * gnu/packages/algebra.scm (singular)[source]: Update upstream hash. See http://www.singular.uni-kl.de:8002/trac/ticket/754 .
* gnu: linux-libre-4.1: Update to 4.1.21.Mark H Weaver2016-04-07
| | | | * gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.21.
* gnu: redis: Update to 3.0.7.David Thompson2016-04-07
| | | | * gnu/packages/databases.scm (redis): Update to 3.0.7.
* gnu: python-pkgconfig: Add license prefix.Mathieu Lirzin2016-04-07
| | | | * gnu/packages/python.scm (python-pkgconfig)[license]: Fix prefix.
* gnu: Add macchanger.John Darrington2016-04-07
| | | | * gnu/packages/networking.scm (macchanger): New variable.
* gnu: node: Update to 5.10.0.David Thompson2016-04-07
| | | | * gnu/packages/node.scm (node): Update to 5.10.0.
* gnu: libuv: Update to 1.8.0.David Thompson2016-04-07
| | | | * gnu/packages/libevent.scm (libuv): Update to 1.8.0.
* environment: container: Work around read-only /etc/resolv.conf issue.David Thompson2016-04-07
| | | | | * guix/scripts/environment.scm (launch-environment/container): Mount /etc/resolv.conf as a writable file.
* gnu: abiword: Add epub, goffice support.Efraim Flashner2016-04-07
| | | | | | * gnu/packages/abiword.scm (abiword.scm)[arguments]: Add "epub" and "goffice" to "enable-plugins" configure flag. [inputs]: Add goffice, libchamplain, telepathy-glib.
* gnu: python-cython: Update to 0.24.Andreas Enge2016-04-07
| | | | * gnu/packages/python.scm (python-cython): Update to 0.24.
* gnu: Add python-cysignals.Andreas Enge2016-04-07
| | | | | * gnu/packages/python.scm (python-cysignals, python2-cysignals): New variables.
* gnu: Add r-zlibbioc.Roel Janssen2016-04-06
| | | | | | * gnu/packages/bioinformatics.scm (r-zlibbioc): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add r-variantannotation.Roel Janssen2016-04-06
| | | | | | * gnu/packages/bioinformatics.scm (r-variantannotation): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: pcre: Fix CVE-2016-3191.Ludovic Courtès2016-04-06
| | | | | | | * gnu/packages/pcre.scm (pcre)[replacement]: New field. (pcre-fixed): New variable. * gnu/packages/patches/pcre-CVE-2016-3191.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
* doc: Update reproducible-builds.org URL.Ludovic Courtès2016-04-06
| | | | | * doc/guix.texi (Invoking guix challenge): Update reproducible-builds URL.
* doc: Use more https URLs.Ludovic Courtès2016-04-06
| | | | * doc/guix.texi (Invoking guix challenge): Use https instead of http.
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