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* gnu: Move date/time packages from python.scm to time.scm.Ricardo Wurmus2017-11-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-pytz, python2-pytz, python-dateutil, python2-dateutil, python-parsedatetime, python2-parsedatetime, python-tzlocal, python-isodate, python2-isodate, python-iso8601, python2-iso8601, python-monotonic, python2-monotonic, python-pyrfc3339, python2-pyrfc3339, python-arrow, python2-arrow, python-aniso8601, python2-aniso8601): Move from here... * gnu/packages/time.scm: ...to here. * gnu/packages/calendar.scm, gnu/packages/check.scm, gnu/packages/django.scm, gnu/packages/ebook.scm, gnu/packages/gnome.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/mail.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/tls.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm: Adjust accordingly.
* gnu: Move more testing packages from python.scm to check.scm.Ricardo Wurmus2017-11-18
| | | | | | | * gnu/packages/python.scm (python-flexmock, python2-flexmock, python-freezegun, python2-freezegun, python-flaky, python2-flaky): Move from here... * gnu/packages/check.scm: ...to here.
* gnu: Add java-plexus-container-default.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-plexus-container-default): New variable.
* gnu: Add java-plexus-archiver.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-plexus-archiver): New variable.
* gnu: Add java-plexus-io.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-plexus-io): New variable.
* gnu: Add java-plexus-container-default-bootstrap.Julien Lepiller2017-11-18
| | | | | * gnu/packages/java.scm (java-plexus-container-default-bootstrap): New variable.
* gnu: Add java-tukaani-xz.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-tukaani-xz): New variable.
* gnu: Add java-geronimo-xbean-reflect.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-geronimo-xbean-reflect): New variable.
* gnu: Add java-jdom.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-jdom): New variable.
* gnu: Add java-log4j-1.2-api.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-log4j-1.2-api): New variable.
* gnu: Add java-log4j-core.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-log4j-core): New variable.
* gnu: Add java-kafka-clients.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-kafka-clients): New variable.
* gnu: Add java-commons-beanutils.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-commons-beanutils): New variable.
* gnu: Add java-commons-collections.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-commons-collections): New variable.
* gnu: Add java-commons-csv.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-commons-csv): New variable.
* gnu: Add java-jeromq.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-jeromq): New variable.
* gnu: Add java-mail.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-mail): New variable.
* gnu: Add java-jboss-jms-api-spec.Julien Lepiller2017-11-18
| | | | * gnu/packages/java.scm (java-jboss-jms-api-spec): New variable.
* licenses: Add cddl1.1.Julien Lepiller2017-11-18
| | | | * guix/licenses.scm (cddl1.1): New variable.
* gnu: Add java-iq80-snappy.Julien Lepiller2017-11-18
| | | | * gnu/packages/compression.scm (java-iq80-snappy): New variable.
* gnu: Add java-snappy.Julien Lepiller2017-11-18
| | | | * gnu/packages/compression.scm (java-snappy): New variable.
* gnu: Add bitshuffle.Julien Lepiller2017-11-18
| | | | * gnu/packages/compression.scm (bitshuffle): New variable.
* build-system: texlive: Only make a union of directories.Ricardo Wurmus2017-11-18
| | | | | * guix/build/texlive-build-system.scm (configure): Filter the input directories to ensure that source tarballs are excluded.
* gnu: Remove duplicates from (gnu packages tex).Ricardo Wurmus2017-11-18
| | | | | * gnu/packages/tex.scm (texlive-latex-hyperref, texlive-latex-fancyvrb): Remove duplicates.
* gnu: r-genomeinfodbdata: Update to 0.99.1.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 0.99.1.
* gnu: r-go-db: Update to 3.5.0.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-go-db): Update to 3.5.0.
* gnu: r-org-ce-eg-db: Update to 3.5.0.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.5.0.
* gnu: r-org-dm-eg-db: Update to 3.5.0.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.5.0.
* gnu: r-org-mm-eg-db: Update to 3.5.0.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.5.0.
* gnu: r-genomationdata: Update to 1.10.0.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.10.0.
* gnu: Remove duplicates from (gnu packages statistics).Ricardo Wurmus2017-11-18
| | | | | * gnu/packages/statistics.scm (r-cluster, r-codetools, r-kernsmooth): Remove duplicates.
* gnu: Remove duplicate from (gnu packages gnupg).Ricardo Wurmus2017-11-18
| | | | * gnu/packages/gnupg.scm (perl-gnupg-interface): Remove duplicate.
* gnu: Remove duplicate from (gnu packages bioinformatics).Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-annotationfilter): Remove duplicate.
* gnu: Remove duplicate from (gnu packages cran).Ricardo Wurmus2017-11-18
| | | | * gnu/packages/cran.scm (r-bbmle): Remove duplicate.
* gnu: Remove duplicates from (gnu packages java).Ricardo Wurmus2017-11-18
| | | | * gnu/packages/java.scm (java-commons-net, java-asm): Remove duplicates.
* gnu: r-org-hs-eg-db: Clarify description.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-org-hs-eg-db)[description]: Clarify.
* gnu: r-org-hs-eg-db: Update to 3.5.0.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.5.0.
* gnu: r-org-hs-eg-db: Remove duplicate package definition.Ricardo Wurmus2017-11-18
| | | | * gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Remove duplicate variable.
* gnu: linux-libre: Remove Tegra DRM from arm configuration.Mark H Weaver2017-11-18
| | | | | | | The code fails to compile on armhf using our configuration. See <https://patchwork.kernel.org/patch/9688615/> for details. * gnu/packages/aux-files/linux-libre/4.14-arm.conf: Remove Tegra DRM support.
* gnu: linux-libre: Remove Nouveau from arm configuration.Mark H Weaver2017-11-18
| | | | | | The Nouveau code fails to compile on armhf with our configuration. * gnu/packages/aux-files/linux-libre/4.14-arm.conf: Disable Nouveau.
* gnu: dino: Update to 0.0-2-2a514d096.Ricardo Wurmus2017-11-18
| | | | | | | | * gnu/packages/messaging.scm (dino): Update to 0.0-2-2a514d096. [source]: Do not fetch libsignal-protocol-c submodule. [arguments]: Add phase "unpack-sources" to unpack our sources for libsignal-protocol-c. [native-inputs]: Add "libsignal-protocol-c-source".
* build-system/go: Don't let Go executables refer to the Go compiler.Leo Famulari2017-11-17
| | | | | | | * guix/build/go-build-system.scm (remove-store-reference, remove-go-references): New procedures. (%standard-phases): Add 'remove-go-references' phase. * guix/build-system/go.scm (go-build): Add allow-go-reference? key.
* gnu: vim: Update to 8.0.1300.Leo Famulari2017-11-17
| | | | * gnu/packages/vim.scm (vim): Update to 8.0.1300.
* gnu: tuxguitar: Build with icedtea-8.Ricardo Wurmus2017-11-17
| | | | * gnu/packages/music.scm (tuxguitar)[arguments]: Use icedtea-8.
* gnu: java-swt: Update to 4.7.1a.Ricardo Wurmus2017-11-17
| | | | | | * gnu/packages/java.scm (java-swt): Update to 4.7.1a. [arguments]: Build with icedtea-8. [inputs]: Remove "icecat".
* gnu: eolie: Update to 0.9.12.Ricardo Wurmus2017-11-17
| | | | | * gnu/packages/gnome.scm (eolie): Update to 0.9.12. [inputs]: Add python-dateutil.
* doc: Write "file system" instead of "partition" as appopriate.Marco van Hulten2017-11-17
| | | | | * doc/guix.texi (Preparing for Installation): Write "file system" instead of "partition" as appopriate.
* gnu: Move database packages from python.scm to databases.scm.Ricardo Wurmus2017-11-17
| | | | | | | | | | | | | | | | | | * gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite, python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils, python2-sqlalchemy-utils, python-alembic, python2-alembic, python-pickleshare, python2-pickleshare, python-apsw, python2-apsw, python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2, python-sadisplay, python2-sadisplay, python-mysqlclient, python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis, python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq, python-trollius-redis, python2-trollius-redis, python-sqlparse, python2-sqlparse, python-sql, python2-sql): Move from here... * gnu/packages/databases.scm: ...to here. * gnu/packages/tryton.scm, gnu/packages/python-web.scm, gnu/packages/nutrition.scm, gnu/packages/medical.scm: Adjust accordingly.
* gnu: python-scikit-learn: Move from python.scm to machine-learning.scm.Ricardo Wurmus2017-11-17
| | | | | | * gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): Move from here... * gnu/packages/machine-learning.scm: ...to here.
* gnu: Move more web packages from python.scm to python-web.scm.Ricardo Wurmus2017-11-17
| | | | | | | * gnu/packages/python.scm (python-pastescript, python2-pastescript, python-paste, python2-paste, python-werkzeug, python2-werkzeug, python-bottle, python2-bottle, python-wtforms, python2-wtforms): Move from here... * gnu/packages/python-web.scm: ...to here.
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