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* gnu: python-parse: Use 'modify-phases' syntax.Efraim Flashner2016-10-27
| | | | | * gnu/packages/python.scm (python-parse)[arguments]: Use 'modify-phases' syntax.
* gnu: python-parse: Fix failing test.Efraim Flashner2016-10-27
| | | | | | * gnu/packages/python.scm (python-parse)[origin]: Add patch. * gnu/packages/patches/python-parse-too-many-fields.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: python-pytest-django: Add missing test input.Efraim Flashner2016-10-27
| | | | | * gnu/packages/django.scm (python-pytest-django)[native-inputs]: Add python-django.
* gnu: python-django-filter: Add inputs for tests.Efraim Flashner2016-10-27
| | | | | * gnu/packages/django.scm (python-django-filter)[native-inputs]: Add python-django, python-mock.
* gnu: python-wtforms: Skip optional tests.Efraim Flashner2016-10-27
| | | | | * gnu/packages/python.scm (python-wtforms)[arguments]: Add a phase preventing tests from failing when optional tests aren't run.
* gnu: lightning: Add missing input.Efraim Flashner2016-10-27
| | | | * gnu/packages/assembly.scm (lightning)[native-inputs]: Add zlib.
* gnu: gxmessage: Add missing input.Efraim Flashner2016-10-27
| | | | * gnu/packages/gxmessage.scm (gxmessage)[native-inputs]: Add gtk+3-bin.
* gnu: btrfs-progs: Update to 4.8.2.Leo Famulari2016-10-27
| | | | * gnu/packages/linux.scm (btrfs-progs): Update to 4.8.2.
* gnu: blender: Update to 2.78a.Leo Famulari2016-10-27
| | | | * gnu/packages/graphics.scm (blender): Update to 2.78a.
* gnu: python-s3transfer: Run the tests.Leo Famulari2016-10-26
| | | | | | * gnu/packages/python.scm (python-s3transfer, python2-s3transfer)[arguments]: Use python-nose to run the tests. [native-inputs]: Add python-mock and python-nose.
* Merge branch 'master' into core-updatesLeo Famulari2016-10-26
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| * gnu: Add lci.ng02016-10-26
| | | | | | | | | | | | | | * gnu/packages/lolcode.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| * gnu: Add autossh.Christopher Allan Webber2016-10-26
| | | | | | | | * gnu/packages/ssh.scm (autossh): New variable.
| * gnu: r: Update to 3.3.1.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r): Update to 3.3.1.
| * gnu: r-matrixstats: Update to 0.51.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-matrixstats): Update to 0.51.0.
| * gnu: r-r-utils: Update to 2.4.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-r-utils): Update to 2.4.0.
| * gnu: r-irlba: Update to 2.1.2.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-irlba): Update to 2.1.2.
| * gnu: r-codetools: Update to 0.2-15.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-codetools): Update to 0.2-15.
| * gnu: r-snow: Update to 0.4-2.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-snow): Update to 0.4-2.
| * gnu: r-backports: Update to 1.0.4.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-backports): Update to 1.0.4.
| * gnu: r-foreign: Update to 0.8-67.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-foreign): Update to 0.8-67.
| * gnu: r-cluster: Update to 2.0.5.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-cluster): Update to 2.0.5.
| * gnu: r-acepack: Update to 1.4.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-acepack): Update to 1.4.0.
| * gnu: r-r6: Update to 2.2.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-r6): Update to 2.2.0.
| * gnu: r-evaluate: Update to 0.10.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-evaluate): Update to 0.10.
| * gnu: r-reshape2: Update to 1.4.2.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-reshape2): Update to 1.4.2.
| * gnu: r-stringi: Update to 1.1.2.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-stringi): Update to 1.1.2.
| * gnu: r-matrix: Update to 1.2-7.1.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-matrix): Update to 1.2-7.1.
| * gnu: r-colorspace: Update to 1.2-7.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/statistics.scm (r-colorspace): Update to 1.2-7.
| * gnu: r-jsonlite: Update to 1.1.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/web.scm (r-jsonlite): Update to 1.1.
| * gnu: r-curl: Update to 2.2.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/web.scm (r-curl): Update to 2.2.
| * gnu: r-seqinr: Update to 3.3-3.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-3.
| * gnu: r-rcpparmadillo: Update to 0.7.500.0.0.Ricardo Wurmus2016-10-26
| | | | | | | | | | | | * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.500.0. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0.
| * gnu: armadillo: Update to 7.500.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/maths.scm (armadillo): Update to 7.500.0.
| * gnu: r-rmarkdown: Update to 1.1.Ricardo Wurmus2016-10-26
| | | | | | | | | | * gnu/packages/statistics.scm (r-rmarkdown): Update to 1.1. [propagated-inputs]: Add r-evaluate, r-tibble.
| * gnu: bioperl-minimal: Update to 1.7.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/bioinformatics.scm (bioperl-minimal): Update to 1.7.0.
| * gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a.Marius Bakke2016-10-26
| | | | | | | | | | | | | | | | | | | | The fix from upstream did not apply cleanly due to many context changes. This was adapted by cloning mupdf 1.9a from git and fixing conflicts after applying our patches and cherry-picking upstream commit 1e03c06. This is a follow-up to 47a04fca999b91309d196afc9ebf4d8ac6f2083f. * gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a.
| * guix package: Display generation diffs.Roel Janssen2016-10-26
| | | | | | | | | | | | | | * guix/ui.scm (display-profile-content-diff): New variable. * guix/scripts/package.scm (process-query): Use display-profile-content-diff. In collaboration with Benz Schenk.
| * gnu: python-certifi: Update to 2016.8.31.ng02016-10-26
| | | | | | | | | | | | * gnu/packages/python.scm (python-certifi): Update to 2016.8.31. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| * gnu: security-token: Use 'license:' prefix.Marius Bakke2016-10-26
| | | | | | | | | | * gnu/packages/security-token.scm (libyubikey)[license]: Add prefix. (ykclient)[license]: Add prefix.
| * gnu: yubico.scm: Rename to security-token.scm.Marius Bakke2016-10-26
| | | | | | | | | | | | * gnu/packages/yubico.scm: Delete file. * gnu/packages/security-token.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
| * gnu: offlineimap: Install documentation.Marius Bakke2016-10-26
| | | | | | | | | | | | | | | | * gnu/packages/mail.scm (offlineimap)[native-inputs]: Add asciidoc and libxslt. [arguments]: Add phases 'build-documentation' and 'install-documentation' to build and install manpages. Also remove unneeded key 'inputs' from 'wrap-binary' phase.
| * gnu: notmuch: Update to 0.23.1.Marius Bakke2016-10-26
| | | | | | | | | | | | | | * gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/mail.scm (notmuch): Update to 0.23.1. Remove patch.
| * gnu: vlc: Add x265 support.Efraim Flashner2016-10-26
| | | | | | | | * gnu/packages/video.scm (vlc)[inputs]: Add x265.
| * gnu: gst-plugins-bad: Add x265 support.Efraim Flashner2016-10-26
| | | | | | | | * gnu/packages/gstreamer.scm (gst-plugins-bad)[inputs]: Add x265.
| * gnu: ffmpeg: Add x265 support.Efraim Flashner2016-10-26
| | | | | | | | | | * gnu/packages/video.scm (ffmpeg)[inputs]: Add x265. [arguments]: Add '--enable-libx265' flag.
| * gnu: Add x265.Efraim Flashner2016-10-26
| | | | | | | | * gnu/packages/video.scm (x265): New variable.
| * gnu: Add psyclpc.ng02016-10-26
| | | | | | | | | | | | * gnu/packages/psyc.scm (psyclpc): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| * gnu: opensmtpd: Fix 'license' field.Ludovic Courtès2016-10-26
| | | | | | | | | | | | * gnu/packages/mail.scm (opensmtpd)[license]: Use LICENSE:OPENSSL, not OPENSSL. (opensmtpd-extras)[license]: Likewise.
| * gnu: r-genomationdata: Update to 1.6.0.Ricardo Wurmus2016-10-26
| | | | | | | | * gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.6.0.
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